data_8K6F
#
_model_server_result.job_id            KVCMS3tMnG4e-yiUxci-Bw 
_model_server_result.datetime_utc      '2025-02-24 03:33:54' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8k6f 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"G","auth_seq_id":401}' 
#
_entry.id    8K6F 
#
_exptl.entry_id    8K6F 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              507.181 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            "ADENOSINE-5'-TRIPHOSPHATE" 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90.3 
_cell.angle_gamma         90 
_cell.entry_id            8K6F 
_cell.length_a            54.69 
_cell.length_b            214.227 
_cell.length_c            79.563 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8K6F 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    hexameric 
_pdbx_struct_assembly.oligomeric_count      6 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 G N N 
? 4 H N N 
#
_chem_comp.formula           'C10 H16 N5 O13 P3' 
_chem_comp.formula_weight    507.181 
_chem_comp.id                ATP 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              "ADENOSINE-5'-TRIPHOSPHATE" 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PG O1G ATP doub 132 n n 
PG O2G ATP sing 133 n n 
PG O3G ATP sing 134 n n 
PG O3B ATP sing 135 n n 
O2G HOG2 ATP sing 136 n n 
O3G HOG3 ATP sing 137 n n 
PB O1B ATP doub 138 n n 
PB O2B ATP sing 139 n n 
PB O3B ATP sing 140 n n 
PB O3A ATP sing 141 n n 
O2B HOB2 ATP sing 142 n n 
PA O1A ATP doub 143 n n 
PA O2A ATP sing 144 n n 
PA O3A ATP sing 145 n n 
PA O5' ATP sing 146 n n 
O2A HOA2 ATP sing 147 n n 
O5' C5' ATP sing 148 n n 
C5' C4' ATP sing 149 n n 
C5' "H5'1" ATP sing 150 n n 
C5' "H5'2" ATP sing 151 n n 
C4' O4' ATP sing 152 n n 
C4' C3' ATP sing 153 n n 
C4' H4' ATP sing 154 n n 
O4' C1' ATP sing 155 n n 
C3' O3' ATP sing 156 n n 
C3' C2' ATP sing 157 n n 
C3' H3' ATP sing 158 n n 
O3' HO3' ATP sing 159 n n 
C2' O2' ATP sing 160 n n 
C2' C1' ATP sing 161 n n 
C2' H2' ATP sing 162 n n 
O2' HO2' ATP sing 163 n n 
C1' N9 ATP sing 164 n n 
C1' H1' ATP sing 165 n n 
N9 C8 ATP sing 166 n y 
N9 C4 ATP sing 167 n y 
C8 N7 ATP doub 168 n y 
C8 H8 ATP sing 169 n n 
N7 C5 ATP sing 170 n y 
C5 C6 ATP sing 171 n y 
C5 C4 ATP doub 172 n y 
C6 N6 ATP sing 173 n n 
C6 N1 ATP doub 174 n y 
N6 HN61 ATP sing 175 n n 
N6 HN62 ATP sing 176 n n 
N1 C2 ATP sing 177 n y 
C2 N3 ATP doub 178 n y 
C2 H2 ATP sing 179 n n 
N3 C4 ATP sing 180 n y 
#
_atom_sites.entry_id                     8K6F 
_atom_sites.fract_transf_matrix[1][1]    0.018285 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.000096 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.004668 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.012569 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
G 4 ATP A 1 401 402 ATP ATP . 
H 4 ATP B 1 401 402 ATP ATP . 
I 5 AR6 D 1 401 401 AR6 AR6 . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PG ATP . . . G 4 5.578 1.505 18.728 1 79.02 ? PG ATP 401 A 1 
HETATM 2 O O1G ATP . . . G 4 5.407 2.953 19.041 1 51.7 ? O1G ATP 401 A 1 
HETATM 3 O O2G ATP . . . G 4 6.21 0.689 19.814 1 69.54 ? O2G ATP 401 A 1 
HETATM 4 O O3G ATP . . . G 4 4.376 0.848 18.114 1 60.46 ? O3G ATP 401 A 1 
HETATM 5 P PB ATP . . . G 4 8.097 2.102 17.438 1 58.62 ? PB ATP 401 A 1 
HETATM 6 O O1B ATP . . . G 4 8.044 3.43 16.777 1 51.92 ? O1B ATP 401 A 1 
HETATM 7 O O2B ATP . . . G 4 8.814 1.949 18.74 1 49.61 ? O2B ATP 401 A 1 
HETATM 8 O O3B ATP . . . G 4 6.606 1.528 17.503 1 75.14 ? O3B ATP 401 A 1 
HETATM 9 P PA ATP . . . G 4 7.928 0.58 15.145 1 44.81 ? PA ATP 401 A 1 
HETATM 10 O O1A ATP . . . G 4 7.559 1.728 14.276 1 50.16 ? O1A ATP 401 A 1 
HETATM 11 O O2A ATP . . . G 4 6.854 -0.366 15.557 1 46.36 ? O2A ATP 401 A 1 
HETATM 12 O O3A ATP . . . G 4 8.767 1.129 16.379 1 53.22 ? O3A ATP 401 A 1 
HETATM 13 O O5' ATP . . . G 4 9.02 -0.299 14.398 1 48.23 ? O5' ATP 401 A 1 
HETATM 14 C C5' ATP . . . G 4 9.88 0.287 13.449 1 49.92 ? C5' ATP 401 A 1 
HETATM 15 C C4' ATP . . . G 4 11.063 -0.634 13.281 1 49.45 ? C4' ATP 401 A 1 
HETATM 16 O O4' ATP . . . G 4 10.66 -1.972 13.054 1 51.66 ? O4' ATP 401 A 1 
HETATM 17 C C3' ATP . . . G 4 11.922 -0.325 12.075 1 54.34 ? C3' ATP 401 A 1 
HETATM 18 O O3' ATP . . . G 4 12.926 0.655 12.328 1 67.94 ? O3' ATP 401 A 1 
HETATM 19 C C2' ATP . . . G 4 12.607 -1.627 11.809 1 51.12 ? C2' ATP 401 A 1 
HETATM 20 O O2' ATP . . . G 4 13.945 -1.455 12.258 1 52.28 ? O2' ATP 401 A 1 
HETATM 21 C C1' ATP . . . G 4 11.823 -2.656 12.604 1 58.1 ? C1' ATP 401 A 1 
HETATM 22 N N9 ATP . . . G 4 11.479 -3.867 11.815 1 65.83 ? N9 ATP 401 A 1 
HETATM 23 C C8 ATP . . . G 4 11.979 -5.09 12.065 1 60.13 ? C8 ATP 401 A 1 
HETATM 24 N N7 ATP . . . G 4 11.493 -6.005 11.204 1 56.73 ? N7 ATP 401 A 1 
HETATM 25 C C5 ATP . . . G 4 10.666 -5.372 10.374 1 58.38 ? C5 ATP 401 A 1 
HETATM 26 C C6 ATP . . . G 4 9.819 -5.778 9.249 1 57.72 ? C6 ATP 401 A 1 
HETATM 27 N N6 ATP . . . G 4 9.804 -7.062 8.839 1 54.07 ? N6 ATP 401 A 1 
HETATM 28 N N1 ATP . . . G 4 9.091 -4.822 8.647 1 58.93 ? N1 ATP 401 A 1 
HETATM 29 C C2 ATP . . . G 4 9.118 -3.543 9.058 1 56.79 ? C2 ATP 401 A 1 
HETATM 30 N N3 ATP . . . G 4 9.862 -3.112 10.092 1 52.39 ? N3 ATP 401 A 1 
HETATM 31 C C4 ATP . . . G 4 10.656 -3.96 10.771 1 57.76 ? C4 ATP 401 A 1 
HETATM 32 H "H5'1" ATP . . . G 4 10.234 1.255 13.811 1 59.68 ? "H5'1" ATP 401 A 1 
HETATM 33 H "H5'2" ATP . . . G 4 9.356 0.429 12.502 1 59.68 ? "H5'2" ATP 401 A 1 
HETATM 34 H H4' ATP . . . G 4 11.675 -0.584 14.195 1 59.11 ? H4' ATP 401 A 1 
HETATM 35 H H3' ATP . . . G 4 11.31 -0.06 11.203 1 64.97 ? H3' ATP 401 A 1 
HETATM 36 H HO3' ATP . . . G 4 12.598 1.342 12.923 1 81.3 ? HO3' ATP 401 A 1 
HETATM 37 H H2' ATP . . . G 4 12.59 -1.862 10.741 1 61.11 ? H2' ATP 401 A 1 
HETATM 38 H HO2' ATP . . . G 4 13.971 -1.044 13.133 1 62.5 ? HO2' ATP 401 A 1 
HETATM 39 H H1' ATP . . . G 4 12.415 -2.95 13.482 1 69.49 ? H1' ATP 401 A 1 
HETATM 40 H H8 ATP . . . G 4 12.679 -5.32 12.853 1 71.92 ? H8 ATP 401 A 1 
HETATM 41 H HN61 ATP . . . G 4 9.228 -7.337 8.058 1 64.65 ? HN61 ATP 401 A 1 
HETATM 42 H HN62 ATP . . . G 4 10.37 -7.748 9.32 1 64.65 ? HN62 ATP 401 A 1 
HETATM 43 H H2 ATP . . . G 4 8.51 -2.821 8.529 1 67.91 ? H2 ATP 401 A 1 
#
_model_server_stats.io_time_ms              13 
_model_server_stats.parse_time_ms           13 
_model_server_stats.create_model_time_ms    12 
_model_server_stats.query_time_ms           315 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           43 
#