data_8K6Y
#
_model_server_result.job_id            tnsEvURAwVTDROyG31lCVQ 
_model_server_result.datetime_utc      '2024-10-10 09:32:45' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8k6y 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":601}' 
#
_entry.id    8K6Y 
#
_exptl.entry_id    8K6Y 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              63.546 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'COPPER (II) ION' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          126.76 
_cell.angle_gamma         90 
_cell.entry_id            8K6Y 
_cell.length_a            145.85 
_cell.length_b            100.32 
_cell.length_c            96.62 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8K6Y 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    trimeric 
_pdbx_struct_assembly.oligomeric_count      3 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      4 
_struct_asym.id                             D 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A NE2 HIS 79 A HIS 72 1_555 E FE HEM . A HEM 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.098 ? 
metalc ? metalc2 A ND1 HIS 240 A HIS 233 1_555 D CU CU . A CU 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.106 ? 
metalc ? metalc3 A NE2 HIS 289 A HIS 282 1_555 D CU CU . A CU 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.84 ? 
metalc ? metalc4 A NE2 HIS 290 A HIS 283 1_555 D CU CU . A CU 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.163 ? 
metalc ? metalc5 A NE2 HIS 391 A HIS 384 1_555 F FE HAS . A HAS 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.158 ? 
metalc ? metalc6 A NE2 HIS 393 A HIS 386 1_555 E FE HEM . A HEM 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.198 ? 
metalc ? metalc7 D CU CU . A CU 601 1_555 R O CMO . A CMO 615 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.551 ? 
metalc ? metalc8 B ND1 HIS 114 B HIS 114 1_555 T CU2 CUA . B CUA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.999 ? 
metalc ? metalc9 B SG CYS 149 B CYS 149 1_555 T CU1 CUA . B CUA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.389 ? 
metalc ? metalc10 B SG CYS 149 B CYS 149 1_555 T CU2 CUA . B CUA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.428 ? 
metalc ? metalc11 B O GLN 151 B GLN 151 1_555 T CU1 CUA . B CUA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.435 ? 
metalc ? metalc12 B SG CYS 153 B CYS 153 1_555 T CU1 CUA . B CUA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.363 ? 
metalc ? metalc13 B SG CYS 153 B CYS 153 1_555 T CU2 CUA . B CUA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.337 ? 
metalc ? metalc14 B ND1 HIS 157 B HIS 157 1_555 T CU1 CUA . B CUA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.001 ? 
metalc ? metalc15 B SD MET 160 B MET 160 1_555 T CU2 CUA . B CUA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.253 ? 
#
_chem_comp.formula           'Cu 2' 
_chem_comp.formula_weight    63.546 
_chem_comp.id                CU 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'COPPER (II) ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     8K6Y 
_atom_sites.fract_transf_matrix[1][1]    0.006856 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.005122 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.009968 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.012919 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
D 4 CU A 1 601 601 CU CU . 
E 5 HEM A 1 602 602 HEM HEM . 
F 6 HAS A 1 603 603 HAS HAS . 
G 7 OLC A 1 604 604 OLC OLC . 
H 7 OLC A 1 605 605 OLC OLC . 
I 7 OLC A 1 606 606 OLC OLC . 
J 7 OLC A 1 607 607 OLC OLC . 
K 7 OLC A 1 608 608 OLC OLC . 
L 7 OLC A 1 609 609 OLC OLC . 
M 7 OLC A 1 610 610 OLC OLC . 
N 7 OLC A 1 611 611 OLC OLC . 
O 7 OLC A 1 612 612 OLC OLC . 
P 7 OLC A 1 613 613 OLC OLC . 
Q 7 OLC A 1 614 614 OLC OLC . 
R 8 CMO A 1 615 615 CMO CMO . 
S 7 OLC A 1 616 102 OLC OLC . 
T 9 CUA B 1 201 201 CUA CUA . 
U 7 OLC B 1 202 202 OLC OLC . 
V 7 OLC B 1 203 103 OLC OLC . 
W 7 OLC C 1 101 101 OLC OLC . 
X 10 HOH A 1 701 130 HOH HOH . 
X 10 HOH A 2 702 166 HOH HOH . 
X 10 HOH A 3 703 141 HOH HOH . 
X 10 HOH A 4 704 7 HOH HOH . 
X 10 HOH A 5 705 153 HOH HOH . 
X 10 HOH A 6 706 3 HOH HOH . 
X 10 HOH A 7 707 40 HOH HOH . 
X 10 HOH A 8 708 163 HOH HOH . 
X 10 HOH A 9 709 23 HOH HOH . 
X 10 HOH A 10 710 19 HOH HOH . 
X 10 HOH A 11 711 142 HOH HOH . 
X 10 HOH A 12 712 18 HOH HOH . 
X 10 HOH A 13 713 36 HOH HOH . 
X 10 HOH A 14 714 11 HOH HOH . 
X 10 HOH A 15 715 31 HOH HOH . 
X 10 HOH A 16 716 134 HOH HOH . 
X 10 HOH A 17 717 122 HOH HOH . 
X 10 HOH A 18 718 92 HOH HOH . 
X 10 HOH A 19 719 45 HOH HOH . 
X 10 HOH A 20 720 33 HOH HOH . 
X 10 HOH A 21 721 42 HOH HOH . 
X 10 HOH A 22 722 37 HOH HOH . 
X 10 HOH A 23 723 21 HOH HOH . 
X 10 HOH A 24 724 30 HOH HOH . 
X 10 HOH A 25 725 197 HOH HOH . 
X 10 HOH A 26 726 17 HOH HOH . 
X 10 HOH A 27 727 120 HOH HOH . 
X 10 HOH A 28 728 126 HOH HOH . 
X 10 HOH A 29 729 8 HOH HOH . 
X 10 HOH A 30 730 41 HOH HOH . 
X 10 HOH A 31 731 20 HOH HOH . 
X 10 HOH A 32 732 12 HOH HOH . 
X 10 HOH A 33 733 25 HOH HOH . 
X 10 HOH A 34 734 57 HOH HOH . 
X 10 HOH A 35 735 94 HOH HOH . 
X 10 HOH A 36 736 47 HOH HOH . 
X 10 HOH A 37 737 15 HOH HOH . 
X 10 HOH A 38 738 52 HOH HOH . 
X 10 HOH A 39 739 6 HOH HOH . 
X 10 HOH A 40 740 26 HOH HOH . 
X 10 HOH A 41 741 22 HOH HOH . 
X 10 HOH A 42 742 24 HOH HOH . 
X 10 HOH A 43 743 162 HOH HOH . 
X 10 HOH A 44 744 39 HOH HOH . 
X 10 HOH A 45 745 96 HOH HOH . 
X 10 HOH A 46 746 29 HOH HOH . 
X 10 HOH A 47 747 9 HOH HOH . 
X 10 HOH A 48 748 4 HOH HOH . 
X 10 HOH A 49 749 16 HOH HOH . 
X 10 HOH A 50 750 13 HOH HOH . 
X 10 HOH A 51 751 34 HOH HOH . 
X 10 HOH A 52 752 75 HOH HOH . 
X 10 HOH A 53 753 46 HOH HOH . 
X 10 HOH A 54 754 14 HOH HOH . 
X 10 HOH A 55 755 32 HOH HOH . 
X 10 HOH A 56 756 10 HOH HOH . 
X 10 HOH A 57 757 129 HOH HOH . 
X 10 HOH A 58 758 27 HOH HOH . 
X 10 HOH A 59 759 121 HOH HOH . 
X 10 HOH A 60 760 2 HOH HOH . 
X 10 HOH A 61 761 186 HOH HOH . 
X 10 HOH A 62 762 133 HOH HOH . 
X 10 HOH A 63 763 136 HOH HOH . 
X 10 HOH A 64 764 124 HOH HOH . 
X 10 HOH A 65 765 5 HOH HOH . 
X 10 HOH A 66 766 35 HOH HOH . 
X 10 HOH A 67 767 51 HOH HOH . 
X 10 HOH A 68 768 143 HOH HOH . 
X 10 HOH A 69 769 28 HOH HOH . 
X 10 HOH A 70 770 169 HOH HOH . 
X 10 HOH A 71 771 190 HOH HOH . 
X 10 HOH A 72 772 188 HOH HOH . 
X 10 HOH A 73 773 123 HOH HOH . 
X 10 HOH A 74 774 93 HOH HOH . 
X 10 HOH A 75 775 168 HOH HOH . 
X 10 HOH A 76 776 54 HOH HOH . 
X 10 HOH A 77 777 167 HOH HOH . 
X 10 HOH A 78 778 50 HOH HOH . 
X 10 HOH A 79 779 131 HOH HOH . 
X 10 HOH A 80 780 43 HOH HOH . 
X 10 HOH A 81 781 49 HOH HOH . 
X 10 HOH A 82 782 178 HOH HOH . 
X 10 HOH A 83 783 184 HOH HOH . 
X 10 HOH A 84 784 189 HOH HOH . 
X 10 HOH A 85 785 48 HOH HOH . 
X 10 HOH A 86 786 135 HOH HOH . 
X 10 HOH A 87 787 154 HOH HOH . 
X 10 HOH A 88 788 157 HOH HOH . 
X 10 HOH A 89 789 170 HOH HOH . 
X 10 HOH A 90 790 132 HOH HOH . 
X 10 HOH A 91 791 191 HOH HOH . 
X 10 HOH A 92 792 156 HOH HOH . 
X 10 HOH A 93 793 165 HOH HOH . 
X 10 HOH A 94 794 187 HOH HOH . 
X 10 HOH A 95 795 171 HOH HOH . 
X 10 HOH A 96 796 138 HOH HOH . 
X 10 HOH A 97 797 164 HOH HOH . 
Y 10 HOH B 1 301 56 HOH HOH . 
Y 10 HOH B 2 302 79 HOH HOH . 
Y 10 HOH B 3 303 173 HOH HOH . 
Y 10 HOH B 4 304 150 HOH HOH . 
Y 10 HOH B 5 305 77 HOH HOH . 
Y 10 HOH B 6 306 110 HOH HOH . 
Y 10 HOH B 7 307 177 HOH HOH . 
Y 10 HOH B 8 308 68 HOH HOH . 
Y 10 HOH B 9 309 69 HOH HOH . 
Y 10 HOH B 10 310 117 HOH HOH . 
Y 10 HOH B 11 311 66 HOH HOH . 
Y 10 HOH B 12 312 74 HOH HOH . 
Y 10 HOH B 13 313 115 HOH HOH . 
Y 10 HOH B 14 314 61 HOH HOH . 
Y 10 HOH B 15 315 119 HOH HOH . 
Y 10 HOH B 16 316 60 HOH HOH . 
Y 10 HOH B 17 317 103 HOH HOH . 
Y 10 HOH B 18 318 139 HOH HOH . 
Y 10 HOH B 19 319 63 HOH HOH . 
Y 10 HOH B 20 320 80 HOH HOH . 
Y 10 HOH B 21 321 125 HOH HOH . 
Y 10 HOH B 22 322 152 HOH HOH . 
Y 10 HOH B 23 323 84 HOH HOH . 
Y 10 HOH B 24 324 62 HOH HOH . 
Y 10 HOH B 25 325 78 HOH HOH . 
Y 10 HOH B 26 326 58 HOH HOH . 
Y 10 HOH B 27 327 64 HOH HOH . 
Y 10 HOH B 28 328 175 HOH HOH . 
Y 10 HOH B 29 329 109 HOH HOH . 
Y 10 HOH B 30 330 72 HOH HOH . 
Y 10 HOH B 31 331 113 HOH HOH . 
Y 10 HOH B 32 332 38 HOH HOH . 
Y 10 HOH B 33 333 174 HOH HOH . 
Y 10 HOH B 34 334 176 HOH HOH . 
Y 10 HOH B 35 335 155 HOH HOH . 
Y 10 HOH B 36 336 106 HOH HOH . 
Y 10 HOH B 37 337 89 HOH HOH . 
Y 10 HOH B 38 338 95 HOH HOH . 
Y 10 HOH B 39 339 71 HOH HOH . 
Y 10 HOH B 40 340 59 HOH HOH . 
Y 10 HOH B 41 341 81 HOH HOH . 
Y 10 HOH B 42 342 88 HOH HOH . 
Y 10 HOH B 43 343 70 HOH HOH . 
Y 10 HOH B 44 344 73 HOH HOH . 
Y 10 HOH B 45 345 127 HOH HOH . 
Y 10 HOH B 46 346 76 HOH HOH . 
Y 10 HOH B 47 347 85 HOH HOH . 
Y 10 HOH B 48 348 86 HOH HOH . 
Y 10 HOH B 49 349 105 HOH HOH . 
Y 10 HOH B 50 350 53 HOH HOH . 
Y 10 HOH B 51 351 83 HOH HOH . 
Y 10 HOH B 52 352 151 HOH HOH . 
Y 10 HOH B 53 353 116 HOH HOH . 
Y 10 HOH B 54 354 145 HOH HOH . 
Y 10 HOH B 55 355 179 HOH HOH . 
Y 10 HOH B 56 356 118 HOH HOH . 
Y 10 HOH B 57 357 91 HOH HOH . 
Y 10 HOH B 58 358 183 HOH HOH . 
Y 10 HOH B 59 359 98 HOH HOH . 
Y 10 HOH B 60 360 90 HOH HOH . 
Y 10 HOH B 61 361 140 HOH HOH . 
Y 10 HOH B 62 362 195 HOH HOH . 
Y 10 HOH B 63 363 104 HOH HOH . 
Y 10 HOH B 64 364 192 HOH HOH . 
Y 10 HOH B 65 365 97 HOH HOH . 
Y 10 HOH B 66 366 44 HOH HOH . 
Y 10 HOH B 67 367 101 HOH HOH . 
Y 10 HOH B 68 368 107 HOH HOH . 
Y 10 HOH B 69 369 100 HOH HOH . 
Y 10 HOH B 70 370 148 HOH HOH . 
Y 10 HOH B 71 371 108 HOH HOH . 
Y 10 HOH B 72 372 159 HOH HOH . 
Y 10 HOH B 73 373 161 HOH HOH . 
Y 10 HOH B 74 374 181 HOH HOH . 
Y 10 HOH B 75 375 193 HOH HOH . 
Y 10 HOH B 76 376 172 HOH HOH . 
Z 10 HOH C 1 201 87 HOH HOH . 
Z 10 HOH C 2 202 194 HOH HOH . 
Z 10 HOH C 3 203 185 HOH HOH . 
Z 10 HOH C 4 204 137 HOH HOH . 
Z 10 HOH C 5 205 196 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           CU 
_atom_site.label_atom_id         CU 
_atom_site.label_comp_id         CU 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         D 
_atom_site.label_entity_id       4 
_atom_site.Cartn_x               0.519 
_atom_site.Cartn_y               3.798 
_atom_site.Cartn_z               21.332 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        29.02 
_atom_site.pdbx_formal_charge    0 
_atom_site.auth_atom_id          CU 
_atom_site.auth_comp_id          CU 
_atom_site.auth_seq_id           601 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              11 
_model_server_stats.parse_time_ms           28 
_model_server_stats.create_model_time_ms    7 
_model_server_stats.query_time_ms           275 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           1 
#