data_8K72 # _model_server_result.job_id jdE0JlksUL2KSFu6w_Wb1A _model_server_result.datetime_utc '2024-11-15 13:45:38' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8k72 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"K","auth_seq_id":410}' # _entry.id 8K72 # _exptl.entry_id 8K72 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 385.415 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '2-[(2~{Z})-3-oxidanyl-2-[3-(phenylsulfonylamino)propanoylimino]-1,3-thiazol-4-yl]ethanoic acid' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8K72 _cell.length_a 86.61 _cell.length_b 86.61 _cell.length_c 145.05 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8K72 _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall 'P 4abw 2nw' _symmetry.space_group_name_H-M 'P 41 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 7_645 y+1,x-1,-z 0 1 0 1 0 0 0 0 -1 86.61 -86.61 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id K _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 199 A HIS 199 1_555 J ZN ZN . A ZN 409 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.333 ? metalc ? metalc2 A OD2 ASP 201 A ASP 201 1_555 J ZN ZN . A ZN 409 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.956 ? metalc ? metalc3 A NE2 HIS 279 A HIS 279 1_555 J ZN ZN . A ZN 409 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.332 ? metalc ? metalc4 J ZN ZN . A ZN 409 1_555 K N11 VJF . A VJF 410 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.517 ? metalc ? metalc5 J ZN ZN . A ZN 409 1_555 K N02 VJF . A VJF 410 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.646 ? metalc ? metalc6 J ZN ZN . A ZN 409 1_555 K O01 VJF . A VJF 410 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.906 ? # _chem_comp.formula 'C14 H15 N3 O6 S2' _chem_comp.formula_weight 385.415 _chem_comp.id VJF _chem_comp.mon_nstd_flag . _chem_comp.name '2-[(2~{Z})-3-oxidanyl-2-[3-(phenylsulfonylamino)propanoylimino]-1,3-thiazol-4-yl]ethanoic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C21 C22 VJF doub 393 n y C21 C20 VJF sing 394 n y C22 C17 VJF sing 395 n y O25 C12 VJF doub 396 n n C20 C19 VJF doub 397 n y C13 C12 VJF sing 398 n n C13 C14 VJF sing 399 n n C12 N11 VJF sing 400 n n C17 S16 VJF sing 401 n n C17 C18 VJF doub 402 n y N15 C14 VJF sing 403 n n N15 S16 VJF sing 404 n n O23 S16 VJF doub 405 n n S09 C10 VJF sing 406 n n S09 C08 VJF sing 407 n n C19 C18 VJF sing 408 n y S16 O24 VJF doub 409 n n N11 C10 VJF doub 410 n n C10 N02 VJF sing 411 n n C08 C03 VJF doub 412 n n O06 C05 VJF doub 413 n n N02 C03 VJF sing 414 n n N02 O01 VJF sing 415 n n C03 C04 VJF sing 416 n n C05 C04 VJF sing 417 n n C05 O07 VJF sing 418 n n C13 H1 VJF sing 419 n n C13 H2 VJF sing 420 n n C20 H3 VJF sing 421 n n C21 H4 VJF sing 422 n n C22 H5 VJF sing 423 n n C04 H6 VJF sing 424 n n C04 H7 VJF sing 425 n n C08 H8 VJF sing 426 n n C14 H9 VJF sing 427 n n C14 H10 VJF sing 428 n n C18 H11 VJF sing 429 n n C19 H12 VJF sing 430 n n N15 H14 VJF sing 431 n n O01 H15 VJF sing 432 n n O07 H16 VJF sing 433 n n # _atom_sites.entry_id 8K72 _atom_sites.fract_transf_matrix[1][1] 0.011546 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011546 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006894 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 A 1 401 906 SO4 SO4 . C 2 SO4 A 1 402 907 SO4 SO4 . D 2 SO4 A 1 403 908 SO4 SO4 . E 2 SO4 A 1 404 909 SO4 SO4 . F 2 SO4 A 1 405 910 SO4 SO4 . G 3 GOL A 1 406 1001 GOL GOL . H 3 GOL A 1 407 1101 GOL GOL . I 3 GOL A 1 408 1201 GOL GOL . J 4 ZN A 1 409 501 ZN ZN . K 5 VJF A 1 410 601 VJF LIG . L 2 SO4 A 1 411 901 SO4 SO4 . M 2 SO4 A 1 412 902 SO4 SO4 . N 2 SO4 A 1 413 903 SO4 SO4 . O 2 SO4 A 1 414 904 SO4 SO4 . P 2 SO4 A 1 415 905 SO4 SO4 . Q 6 HOH A 1 501 47 HOH HOH . Q 6 HOH A 2 502 8 HOH HOH . Q 6 HOH A 3 503 2 HOH HOH . Q 6 HOH A 4 504 48 HOH HOH . Q 6 HOH A 5 505 22 HOH HOH . Q 6 HOH A 6 506 3 HOH HOH . Q 6 HOH A 7 507 59 HOH HOH . Q 6 HOH A 8 508 4 HOH HOH . Q 6 HOH A 9 509 56 HOH HOH . Q 6 HOH A 10 510 7 HOH HOH . Q 6 HOH A 11 511 20 HOH HOH . Q 6 HOH A 12 512 10 HOH HOH . Q 6 HOH A 13 513 55 HOH HOH . Q 6 HOH A 14 514 43 HOH HOH . Q 6 HOH A 15 515 51 HOH HOH . Q 6 HOH A 16 516 21 HOH HOH . Q 6 HOH A 17 517 46 HOH HOH . Q 6 HOH A 18 518 14 HOH HOH . Q 6 HOH A 19 519 9 HOH HOH . Q 6 HOH A 20 520 5 HOH HOH . Q 6 HOH A 21 521 13 HOH HOH . Q 6 HOH A 22 522 1 HOH HOH . Q 6 HOH A 23 523 11 HOH HOH . Q 6 HOH A 24 524 37 HOH HOH . Q 6 HOH A 25 525 28 HOH HOH . Q 6 HOH A 26 526 6 HOH HOH . Q 6 HOH A 27 527 57 HOH HOH . Q 6 HOH A 28 528 40 HOH HOH . Q 6 HOH A 29 529 67 HOH HOH . Q 6 HOH A 30 530 15 HOH HOH . Q 6 HOH A 31 531 29 HOH HOH . Q 6 HOH A 32 532 18 HOH HOH . Q 6 HOH A 33 533 53 HOH HOH . Q 6 HOH A 34 534 41 HOH HOH . Q 6 HOH A 35 535 17 HOH HOH . Q 6 HOH A 36 536 61 HOH HOH . Q 6 HOH A 37 537 24 HOH HOH . Q 6 HOH A 38 538 63 HOH HOH . Q 6 HOH A 39 539 12 HOH HOH . Q 6 HOH A 40 540 69 HOH HOH . Q 6 HOH A 41 541 25 HOH HOH . Q 6 HOH A 42 542 44 HOH HOH . Q 6 HOH A 43 543 58 HOH HOH . Q 6 HOH A 44 544 30 HOH HOH . Q 6 HOH A 45 545 39 HOH HOH . Q 6 HOH A 46 546 68 HOH HOH . Q 6 HOH A 47 547 23 HOH HOH . Q 6 HOH A 48 548 65 HOH HOH . Q 6 HOH A 49 549 71 HOH HOH . Q 6 HOH A 50 550 73 HOH HOH . Q 6 HOH A 51 551 62 HOH HOH . Q 6 HOH A 52 552 70 HOH HOH . Q 6 HOH A 53 553 35 HOH HOH . Q 6 HOH A 54 554 49 HOH HOH . Q 6 HOH A 55 555 34 HOH HOH . Q 6 HOH A 56 556 54 HOH HOH . Q 6 HOH A 57 557 66 HOH HOH . Q 6 HOH A 58 558 64 HOH HOH . Q 6 HOH A 59 559 36 HOH HOH . Q 6 HOH A 60 560 38 HOH HOH . Q 6 HOH A 61 561 19 HOH HOH . Q 6 HOH A 62 562 42 HOH HOH . Q 6 HOH A 63 563 45 HOH HOH . Q 6 HOH A 64 564 50 HOH HOH . Q 6 HOH A 65 565 26 HOH HOH . Q 6 HOH A 66 566 27 HOH HOH . Q 6 HOH A 67 567 72 HOH HOH . Q 6 HOH A 68 568 60 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C10 VJF . . . K 5 22.482 -25.32 5.779 1 83.33 ? C10 VJF 410 A 1 HETATM 2 C C13 VJF . . . K 5 25.961 -25.463 4.221 1 94.89 ? C13 VJF 410 A 1 HETATM 3 C C17 VJF . . . K 5 29.902 -23.161 4.809 1 113.89 ? C17 VJF 410 A 1 HETATM 4 C C20 VJF . . . K 5 30.13 -20.54 3.88 1 115.56 ? C20 VJF 410 A 1 HETATM 5 C C21 VJF . . . K 5 30.332 -21.594 3.015 1 115.45 ? C21 VJF 410 A 1 HETATM 6 C C22 VJF . . . K 5 30.216 -22.908 3.477 1 115.92 ? C22 VJF 410 A 1 HETATM 7 C C03 VJF . . . K 5 20.16 -25.362 6.955 1 75.91 ? C03 VJF 410 A 1 HETATM 8 C C04 VJF . . . K 5 19.085 -25.792 7.944 1 75.8 ? C04 VJF 410 A 1 HETATM 9 C C05 VJF . . . K 5 17.735 -25.051 7.822 1 76.38 ? C05 VJF 410 A 1 HETATM 10 C C08 VJF . . . K 5 20.015 -24.289 5.865 1 78.62 ? C08 VJF 410 A 1 HETATM 11 C C12 VJF . . . K 5 24.525 -24.977 4.419 1 94.39 ? C12 VJF 410 A 1 HETATM 12 C C14 VJF . . . K 5 26.981 -24.858 5.126 1 97.55 ? C14 VJF 410 A 1 HETATM 13 C C18 VJF . . . K 5 29.693 -22.102 5.675 1 115.18 ? C18 VJF 410 A 1 HETATM 14 C C19 VJF . . . K 5 29.81 -20.791 5.216 1 115.42 ? C19 VJF 410 A 1 HETATM 15 N N02 VJF . . . K 5 21.678 -26.039 6.942 1 76.89 ? N02 VJF 410 A 1 HETATM 16 N N11 VJF . . . K 5 23.689 -25.604 5.498 1 90.37 ? N11 VJF 410 A 1 HETATM 17 N N15 VJF . . . K 5 28.222 -25.589 4.889 1 102.78 ? N15 VJF 410 A 1 HETATM 18 O O01 VJF . . . K 5 22.147 -27.078 7.841 1 74.63 ? O01 VJF 410 A 1 HETATM 19 O O06 VJF . . . K 5 16.986 -25.241 6.812 1 75.8 -1 O06 VJF 410 A 1 HETATM 20 O O07 VJF . . . K 5 17.369 -24.262 8.749 1 81.73 ? O07 VJF 410 A 1 HETATM 21 O O23 VJF . . . K 5 30.837 -25.797 4.993 1 107.37 ? O23 VJF 410 A 1 HETATM 22 O O24 VJF . . . K 5 29.859 -25.048 6.853 1 105.5 ? O24 VJF 410 A 1 HETATM 23 O O25 VJF . . . K 5 24.087 -24.118 3.696 1 98.76 ? O25 VJF 410 A 1 HETATM 24 S S09 VJF . . . K 5 21.436 -24.192 5.07 1 82.57 ? S09 VJF 410 A 1 HETATM 25 S S16 VJF . . . K 5 29.739 -24.941 5.428 1 106.61 ? S16 VJF 410 A 1 # _model_server_stats.io_time_ms 42 _model_server_stats.parse_time_ms 78 _model_server_stats.create_model_time_ms 23 _model_server_stats.query_time_ms 1234 _model_server_stats.encode_time_ms 12 _model_server_stats.element_count 25 #