data_8K73
#
_model_server_result.job_id            cW5VBWYi9vQAz4JWUI5WVg 
_model_server_result.datetime_utc      '2024-11-15 13:23:49' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8k73 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"L","auth_seq_id":411}' 
#
_entry.id    8K73 
#
_exptl.entry_id    8K73 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              411.453 
_entity.id                          5 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '2-[(2~{Z})-3-oxidanyl-2-[(3~{R})-1-(phenylsulfonyl)pyrrolidin-3-yl]carbonylimino-1,3-thiazol-4-yl]ethanoic acid' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            8K73 
_cell.length_a            86.609 
_cell.length_b            86.609 
_cell.length_c            145.259 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8K73 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        92 
_symmetry.space_group_name_Hall    'P 4abw 2nw' 
_symmetry.space_group_name_H-M     'P 41 21 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 7_645 y+1,x-1,-z 0 1 0 1 0 0 0 0 -1 86.609 -86.609 0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      5 
_struct_asym.id                             L 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A NE2 HIS 199 A HIS 199 1_555 K ZN ZN . A ZN 410 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.164 ? 
metalc ? metalc2 A OD2 ASP 201 A ASP 201 1_555 K ZN ZN . A ZN 410 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? 
metalc ? metalc3 A NE2 HIS 279 A HIS 279 1_555 K ZN ZN . A ZN 410 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.311 ? 
metalc ? metalc4 K ZN ZN . A ZN 410 1_555 L O06 VK6 . A VK6 411 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.844 ? 
#
_chem_comp.formula           'C16 H17 N3 O6 S2' 
_chem_comp.formula_weight    411.453 
_chem_comp.id                VK6 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '2-[(2~{Z})-3-oxidanyl-2-[(3~{R})-1-(phenylsulfonyl)pyrrolidin-3-yl]carbonylimino-1,3-thiazol-4-yl]ethanoic acid' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C13 C12 VK6 sing 393 n n 
C13 N14 VK6 sing 394 n n 
C17 C16 VK6 doub 395 n y 
C17 C18 VK6 sing 396 n y 
C20 C21 VK6 doub 397 n y 
C20 C19 VK6 sing 398 n y 
C21 C16 VK6 sing 399 n y 
C24 C25 VK6 sing 400 n n 
C24 N14 VK6 sing 401 n n 
C02 C03 VK6 sing 402 n n 
C02 O01 VK6 doub 403 n n 
C02 O27 VK6 sing 404 n n 
C03 C04 VK6 sing 405 n n 
C04 C07 VK6 doub 406 n n 
C04 N05 VK6 sing 407 n n 
C07 S08 VK6 sing 408 n n 
C09 N05 VK6 sing 409 n n 
C09 N10 VK6 doub 410 n n 
C09 S08 VK6 sing 411 n n 
C11 C12 VK6 sing 412 n n 
C11 N10 VK6 sing 413 n n 
C11 O26 VK6 doub 414 n n 
C12 C25 VK6 sing 415 n n 
C16 S15 VK6 sing 416 n n 
C18 C19 VK6 doub 417 n y 
N05 O06 VK6 sing 418 n n 
N14 S15 VK6 sing 419 n n 
O22 S15 VK6 doub 420 n n 
O23 S15 VK6 doub 421 n n 
C13 H1 VK6 sing 422 n n 
C13 H2 VK6 sing 423 n n 
C17 H3 VK6 sing 424 n n 
C20 H4 VK6 sing 425 n n 
C21 H5 VK6 sing 426 n n 
C24 H6 VK6 sing 427 n n 
C24 H7 VK6 sing 428 n n 
C03 H8 VK6 sing 429 n n 
C03 H9 VK6 sing 430 n n 
C07 H10 VK6 sing 431 n n 
C12 H12 VK6 sing 432 n n 
C18 H13 VK6 sing 433 n n 
C19 H14 VK6 sing 434 n n 
C25 H15 VK6 sing 435 n n 
C25 H16 VK6 sing 436 n n 
O06 H17 VK6 sing 437 n n 
O27 H18 VK6 sing 438 n n 
#
_atom_sites.entry_id                     8K73 
_atom_sites.fract_transf_matrix[1][1]    0.011546 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.011546 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.006884 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 SO4 A 1 401 906 SO4 SO4 . 
C 2 SO4 A 1 402 907 SO4 SO4 . 
D 3 GOL A 1 403 1001 GOL GOL . 
E 3 GOL A 1 404 1101 GOL GOL . 
F 3 GOL A 1 405 1201 GOL GOL . 
G 3 GOL A 1 406 1301 GOL GOL . 
H 3 GOL A 1 407 1401 GOL GOL . 
I 3 GOL A 1 408 1501 GOL GOL . 
J 3 GOL A 1 409 1601 GOL GOL . 
K 4 ZN A 1 410 501 ZN ZN . 
L 5 VK6 A 1 411 601 VK6 LIG . 
M 2 SO4 A 1 412 901 SO4 SO4 . 
N 2 SO4 A 1 413 902 SO4 SO4 . 
O 2 SO4 A 1 414 903 SO4 SO4 . 
P 2 SO4 A 1 415 904 SO4 SO4 . 
Q 2 SO4 A 1 416 905 SO4 SO4 . 
R 6 HOH A 1 501 63 HOH HOH . 
R 6 HOH A 2 502 18 HOH HOH . 
R 6 HOH A 3 503 76 HOH HOH . 
R 6 HOH A 4 504 67 HOH HOH . 
R 6 HOH A 5 505 35 HOH HOH . 
R 6 HOH A 6 506 66 HOH HOH . 
R 6 HOH A 7 507 79 HOH HOH . 
R 6 HOH A 8 508 7 HOH HOH . 
R 6 HOH A 9 509 60 HOH HOH . 
R 6 HOH A 10 510 6 HOH HOH . 
R 6 HOH A 11 511 2 HOH HOH . 
R 6 HOH A 12 512 52 HOH HOH . 
R 6 HOH A 13 513 8 HOH HOH . 
R 6 HOH A 14 514 10 HOH HOH . 
R 6 HOH A 15 515 61 HOH HOH . 
R 6 HOH A 16 516 34 HOH HOH . 
R 6 HOH A 17 517 85 HOH HOH . 
R 6 HOH A 18 518 12 HOH HOH . 
R 6 HOH A 19 519 87 HOH HOH . 
R 6 HOH A 20 520 31 HOH HOH . 
R 6 HOH A 21 521 62 HOH HOH . 
R 6 HOH A 22 522 3 HOH HOH . 
R 6 HOH A 23 523 4 HOH HOH . 
R 6 HOH A 24 524 44 HOH HOH . 
R 6 HOH A 25 525 24 HOH HOH . 
R 6 HOH A 26 526 20 HOH HOH . 
R 6 HOH A 27 527 26 HOH HOH . 
R 6 HOH A 28 528 64 HOH HOH . 
R 6 HOH A 29 529 9 HOH HOH . 
R 6 HOH A 30 530 11 HOH HOH . 
R 6 HOH A 31 531 17 HOH HOH . 
R 6 HOH A 32 532 30 HOH HOH . 
R 6 HOH A 33 533 86 HOH HOH . 
R 6 HOH A 34 534 23 HOH HOH . 
R 6 HOH A 35 535 28 HOH HOH . 
R 6 HOH A 36 536 1 HOH HOH . 
R 6 HOH A 37 537 43 HOH HOH . 
R 6 HOH A 38 538 5 HOH HOH . 
R 6 HOH A 39 539 27 HOH HOH . 
R 6 HOH A 40 540 14 HOH HOH . 
R 6 HOH A 41 541 36 HOH HOH . 
R 6 HOH A 42 542 75 HOH HOH . 
R 6 HOH A 43 543 15 HOH HOH . 
R 6 HOH A 44 544 32 HOH HOH . 
R 6 HOH A 45 545 13 HOH HOH . 
R 6 HOH A 46 546 89 HOH HOH . 
R 6 HOH A 47 547 58 HOH HOH . 
R 6 HOH A 48 548 22 HOH HOH . 
R 6 HOH A 49 549 68 HOH HOH . 
R 6 HOH A 50 550 83 HOH HOH . 
R 6 HOH A 51 551 33 HOH HOH . 
R 6 HOH A 52 552 19 HOH HOH . 
R 6 HOH A 53 553 38 HOH HOH . 
R 6 HOH A 54 554 50 HOH HOH . 
R 6 HOH A 55 555 74 HOH HOH . 
R 6 HOH A 56 556 39 HOH HOH . 
R 6 HOH A 57 557 84 HOH HOH . 
R 6 HOH A 58 558 16 HOH HOH . 
R 6 HOH A 59 559 57 HOH HOH . 
R 6 HOH A 60 560 29 HOH HOH . 
R 6 HOH A 61 561 70 HOH HOH . 
R 6 HOH A 62 562 25 HOH HOH . 
R 6 HOH A 63 563 37 HOH HOH . 
R 6 HOH A 64 564 21 HOH HOH . 
R 6 HOH A 65 565 72 HOH HOH . 
R 6 HOH A 66 566 77 HOH HOH . 
R 6 HOH A 67 567 45 HOH HOH . 
R 6 HOH A 68 568 40 HOH HOH . 
R 6 HOH A 69 569 80 HOH HOH . 
R 6 HOH A 70 570 82 HOH HOH . 
R 6 HOH A 71 571 51 HOH HOH . 
R 6 HOH A 72 572 81 HOH HOH . 
R 6 HOH A 73 573 59 HOH HOH . 
R 6 HOH A 74 574 53 HOH HOH . 
R 6 HOH A 75 575 71 HOH HOH . 
R 6 HOH A 76 576 55 HOH HOH . 
R 6 HOH A 77 577 69 HOH HOH . 
R 6 HOH A 78 578 88 HOH HOH . 
R 6 HOH A 79 579 65 HOH HOH . 
R 6 HOH A 80 580 78 HOH HOH . 
R 6 HOH A 81 581 41 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C13 VK6 . . . L 5 26.753 -25.095 5.348 1 85.27 ? C13 VK6 411 A 1 
HETATM 2 C C17 VK6 . . . L 5 29.6 -22.165 5.809 1 93.43 ? C17 VK6 411 A 1 
HETATM 3 C C20 VK6 . . . L 5 30.306 -21.376 3.251 1 94.97 ? C20 VK6 411 A 1 
HETATM 4 C C21 VK6 . . . L 5 30.16 -22.727 3.542 1 94.5 ? C21 VK6 411 A 1 
HETATM 5 C C24 VK6 . . . L 5 27.784 -25.446 3.205 1 83.04 ? C24 VK6 411 A 1 
HETATM 6 C C02 VK6 . . . L 5 17.864 -25.057 7.763 1 59.28 ? C02 VK6 411 A 1 
HETATM 7 C C03 VK6 . . . L 5 19.123 -25.922 7.695 1 61.78 ? C03 VK6 411 A 1 
HETATM 8 C C04 VK6 . . . L 5 20.211 -25.332 6.792 1 65.31 ? C04 VK6 411 A 1 
HETATM 9 C C07 VK6 . . . L 5 20.022 -24.354 5.757 1 70.69 ? C07 VK6 411 A 1 
HETATM 10 C C09 VK6 . . . L 5 22.454 -24.96 5.849 1 76.38 ? C09 VK6 411 A 1 
HETATM 11 C C11 VK6 . . . L 5 24.43 -24.242 4.577 1 87.5 ? C11 VK6 411 A 1 
HETATM 12 C C12 VK6 . . . L 5 25.982 -24.316 4.324 1 86.97 ? C12 VK6 411 A 1 
HETATM 13 C C16 VK6 . . . L 5 29.807 -23.121 4.827 1 93.39 ? C16 VK6 411 A 1 
HETATM 14 C C18 VK6 . . . L 5 29.747 -20.823 5.514 1 96.04 ? C18 VK6 411 A 1 
HETATM 15 C C19 VK6 . . . L 5 30.1 -20.426 4.237 1 95.76 ? C19 VK6 411 A 1 
HETATM 16 C C25 VK6 . . . L 5 26.358 -24.893 2.997 1 81.96 ? C25 VK6 411 A 1 
HETATM 17 N N05 VK6 . . . L 5 21.732 -25.705 6.839 1 67.93 ? N05 VK6 411 A 1 
HETATM 18 N N10 VK6 . . . L 5 23.709 -25.013 5.61 1 80.49 ? N10 VK6 411 A 1 
HETATM 19 N N14 VK6 . . . L 5 28.061 -25.384 4.703 1 86.3 ? N14 VK6 411 A 1 
HETATM 20 O O01 VK6 . . . L 5 17.676 -24.301 8.754 1 54.56 ? O01 VK6 411 A 1 
HETATM 21 O O06 VK6 . . . L 5 22.251 -26.639 7.747 1 65.14 ? O06 VK6 411 A 1 
HETATM 22 O O22 VK6 . . . L 5 29.724 -25.072 6.669 1 96.31 ? O22 VK6 411 A 1 
HETATM 23 O O23 VK6 . . . L 5 30.658 -25.663 4.55 1 93.49 ? O23 VK6 411 A 1 
HETATM 24 O O26 VK6 . . . L 5 23.852 -23.476 3.882 1 97.18 ? O26 VK6 411 A 1 
HETATM 25 O O27 VK6 . . . L 5 17.006 -25.112 6.842 1 57.8 ? O27 VK6 411 A 1 
HETATM 26 S S08 VK6 . . . L 5 21.385 -24.086 5.14 1 72.89 ? S08 VK6 411 A 1 
HETATM 27 S S15 VK6 . . . L 5 29.611 -24.883 5.222 1 89.68 ? S15 VK6 411 A 1 
#
_model_server_stats.io_time_ms              15 
_model_server_stats.parse_time_ms           24 
_model_server_stats.create_model_time_ms    5 
_model_server_stats.query_time_ms           264 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           27 
#