data_8K96 # _model_server_result.job_id -r8886Al4afIkNDpM2rDbw _model_server_result.datetime_utc '2024-10-18 21:21:33' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8k96 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"U","auth_seq_id":802}' # _entry.id 8K96 # _exptl.entry_id 8K96 _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 384.237 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description N-[(1R)-1-(DIHYDROXYBORYL)-3-METHYLBUTYL]-N-(PYRAZIN-2-YLCARBONYL)-L-PHENYLALANINAMIDE _entity.pdbx_number_of_molecules 7 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8K96 _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 8K96 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details heptameric _pdbx_struct_assembly.oligomeric_count 7 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 I N N ? 3 K N N ? 3 M N N ? 3 O N N ? 3 Q N N ? 3 S N N ? 3 U N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A OG SER 582 B SER 582 1_555 I B26 BO2 . B BO2 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.441 ? covale ? covale2 B OG SER 582 A SER 582 1_555 K B26 BO2 . A BO2 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.442 ? covale ? covale3 C OG SER 582 G SER 582 1_555 M B26 BO2 . G BO2 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.443 ? covale ? covale4 D OG SER 582 F SER 582 1_555 O B26 BO2 . F BO2 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.443 ? covale ? covale5 E OG SER 582 E SER 582 1_555 Q B26 BO2 . E BO2 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.442 ? covale ? covale6 F OG SER 582 D SER 582 1_555 S B26 BO2 . D BO2 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.442 ? covale ? covale7 G OG SER 582 C SER 582 1_555 U B26 BO2 . C BO2 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.442 ? # _chem_comp.formula 'C19 H25 B N4 O4' _chem_comp.formula_weight 384.237 _chem_comp.id BO2 _chem_comp.mon_nstd_flag . _chem_comp.name N-[(1R)-1-(DIHYDROXYBORYL)-3-METHYLBUTYL]-N-(PYRAZIN-2-YLCARBONYL)-L-PHENYLALANINAMIDE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms BORTEZOMIB # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 BO2 sing 70 n y N1 C6 BO2 doub 71 n y C2 C3 BO2 doub 72 n y C2 C7 BO2 sing 73 n n C3 N4 BO2 sing 74 n y C3 H3 BO2 sing 75 n n N4 C5 BO2 doub 76 n y C5 C6 BO2 sing 77 n y C5 H5 BO2 sing 78 n n C6 H6 BO2 sing 79 n n C7 O8 BO2 doub 80 n n C7 N9 BO2 sing 81 n n N9 C10 BO2 sing 82 n n N9 HN9 BO2 sing 83 n n C10 C11 BO2 sing 84 n n C10 C18 BO2 sing 85 n n C10 H10 BO2 sing 86 n n C11 C12 BO2 sing 87 n n C11 H111 BO2 sing 88 n n C11 H112 BO2 sing 89 n n C12 C13 BO2 sing 90 n y C12 C17 BO2 doub 91 n y C13 C14 BO2 doub 92 n y C13 H13 BO2 sing 93 n n C14 C15 BO2 sing 94 n y C14 H14 BO2 sing 95 n n C15 C16 BO2 doub 96 n y C15 H15 BO2 sing 97 n n C16 C17 BO2 sing 98 n y C16 H16 BO2 sing 99 n n C17 H17 BO2 sing 100 n n C18 O19 BO2 doub 101 n n C18 N20 BO2 sing 102 n n N20 C21 BO2 sing 103 n n N20 H20 BO2 sing 104 n n C21 C22 BO2 sing 105 n n C21 B26 BO2 sing 106 n n C21 H21 BO2 sing 107 n n C22 C23 BO2 sing 108 n n C22 H221 BO2 sing 109 n n C22 H222 BO2 sing 110 n n C23 C24 BO2 sing 111 n n C23 C25 BO2 sing 112 n n C23 H23 BO2 sing 113 n n C24 H241 BO2 sing 114 n n C24 H242 BO2 sing 115 n n C24 H243 BO2 sing 116 n n C25 H251 BO2 sing 117 n n C25 H252 BO2 sing 118 n n C25 H253 BO2 sing 119 n n B26 O27 BO2 sing 120 n n B26 O28 BO2 sing 121 n n O27 H27 BO2 sing 122 n n O28 H28 BO2 sing 123 n n # _atom_sites.entry_id 8K96 _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code H 2 PO4 B 1 801 801 PO4 PO4 . I 3 BO2 B 1 802 802 BO2 BO2 . J 2 PO4 A 1 801 801 PO4 PO4 . K 3 BO2 A 1 802 802 BO2 BO2 . L 2 PO4 G 1 801 801 PO4 PO4 . M 3 BO2 G 1 802 802 BO2 BO2 . N 2 PO4 F 1 801 801 PO4 PO4 . O 3 BO2 F 1 802 802 BO2 BO2 . P 2 PO4 E 1 801 801 PO4 PO4 . Q 3 BO2 E 1 802 802 BO2 BO2 . R 2 PO4 D 1 801 801 PO4 PO4 . S 3 BO2 D 1 802 802 BO2 BO2 . T 2 PO4 C 1 801 801 PO4 PO4 . U 3 BO2 C 1 802 802 BO2 BO2 . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 BO2 . . . U 3 112.933 158.349 115.327 1 150.43 ? N1 BO2 802 C 1 HETATM 2 C C2 BO2 . . . U 3 113.229 157.066 115.103 1 150.43 ? C2 BO2 802 C 1 HETATM 3 C C3 BO2 . . . U 3 114.311 156.452 115.707 1 150.43 ? C3 BO2 802 C 1 HETATM 4 N N4 BO2 . . . U 3 115.096 157.099 116.572 1 150.43 ? N4 BO2 802 C 1 HETATM 5 C C5 BO2 . . . U 3 114.787 158.373 116.804 1 150.43 ? C5 BO2 802 C 1 HETATM 6 C C6 BO2 . . . U 3 113.718 158.99 116.191 1 150.43 ? C6 BO2 802 C 1 HETATM 7 C C7 BO2 . . . U 3 112.378 156.304 114.129 1 150.43 ? C7 BO2 802 C 1 HETATM 8 O O8 BO2 . . . U 3 111.844 156.868 113.175 1 150.43 ? O8 BO2 802 C 1 HETATM 9 N N9 BO2 . . . U 3 112.268 155 114.381 1 150.43 ? N9 BO2 802 C 1 HETATM 10 C C10 BO2 . . . U 3 112.304 153.984 113.351 1 150.43 ? C10 BO2 802 C 1 HETATM 11 C C11 BO2 . . . U 3 112.336 152.587 113.98 1 150.43 ? C11 BO2 802 C 1 HETATM 12 C C12 BO2 . . . U 3 111.26 152.341 115.008 1 150.43 ? C12 BO2 802 C 1 HETATM 13 C C13 BO2 . . . U 3 110.002 151.899 114.633 1 150.43 ? C13 BO2 802 C 1 HETATM 14 C C14 BO2 . . . U 3 109.019 151.669 115.583 1 150.43 ? C14 BO2 802 C 1 HETATM 15 C C15 BO2 . . . U 3 109.285 151.874 116.917 1 150.43 ? C15 BO2 802 C 1 HETATM 16 C C16 BO2 . . . U 3 110.529 152.306 117.305 1 150.43 ? C16 BO2 802 C 1 HETATM 17 C C17 BO2 . . . U 3 111.513 152.536 116.356 1 150.43 ? C17 BO2 802 C 1 HETATM 18 C C18 BO2 . . . U 3 111.196 154.054 112.301 1 150.43 ? C18 BO2 802 C 1 HETATM 19 O O19 BO2 . . . U 3 110.188 154.733 112.484 1 150.43 ? O19 BO2 802 C 1 HETATM 20 N N20 BO2 . . . U 3 111.416 153.351 111.186 1 150.43 ? N20 BO2 802 C 1 HETATM 21 C C21 BO2 . . . U 3 110.377 153.037 110.219 1 150.43 ? C21 BO2 802 C 1 HETATM 22 C C22 BO2 . . . U 3 110.944 152.245 109.037 1 150.43 ? C22 BO2 802 C 1 HETATM 23 C C23 BO2 . . . U 3 111.935 153.004 108.163 1 150.43 ? C23 BO2 802 C 1 HETATM 24 C C24 BO2 . . . U 3 112.295 152.206 106.919 1 150.43 ? C24 BO2 802 C 1 HETATM 25 C C25 BO2 . . . U 3 111.387 154.366 107.78 1 150.43 ? C25 BO2 802 C 1 HETATM 26 B B26 BO2 . . . U 3 109.248 152.193 110.915 1 150.43 ? B26 BO2 802 C 1 HETATM 27 O O27 BO2 . . . U 3 108.355 152.801 111.737 1 150.43 ? O27 BO2 802 C 1 HETATM 28 O O28 BO2 . . . U 3 109.193 150.849 110.73 1 150.43 ? O28 BO2 802 C 1 # _model_server_stats.io_time_ms 33 _model_server_stats.parse_time_ms 27 _model_server_stats.create_model_time_ms 65 _model_server_stats.query_time_ms 335 _model_server_stats.encode_time_ms 31 _model_server_stats.element_count 28 #