data_8K9U # _model_server_result.job_id f0fYP62ZSS16Ipe31Ah8ww _model_server_result.datetime_utc '2024-11-15 23:44:11' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8k9u # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":601}' # _entry.id 8K9U # _exptl.entry_id 8K9U _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 195.237 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '2-(N-MORPHOLINO)-ETHANESULFONIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8K9U _cell.length_a 69.717 _cell.length_b 92.257 _cell.length_c 162.624 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8K9U _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 442 A CYS 517 1_555 A SG CYS 465 A CYS 540 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf2 B SG CYS 442 B CYS 517 1_555 B SG CYS 465 B CYS 540 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? # _chem_comp.formula 'C6 H13 N O4 S' _chem_comp.formula_weight 195.237 _chem_comp.id MES _chem_comp.mon_nstd_flag . _chem_comp.name '2-(N-MORPHOLINO)-ETHANESULFONIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C2 MES sing 273 n n O1 C6 MES sing 274 n n C2 C3 MES sing 275 n n C2 H21 MES sing 276 n n C2 H22 MES sing 277 n n C3 N4 MES sing 278 n n C3 H31 MES sing 279 n n C3 H32 MES sing 280 n n N4 C5 MES sing 281 n n N4 C7 MES sing 282 n n N4 HN4 MES sing 283 n n C5 C6 MES sing 284 n n C5 H51 MES sing 285 n n C5 H52 MES sing 286 n n C6 H61 MES sing 287 n n C6 H62 MES sing 288 n n C7 C8 MES sing 289 n n C7 H71 MES sing 290 n n C7 H72 MES sing 291 n n C8 S MES sing 292 n n C8 H81 MES sing 293 n n C8 H82 MES sing 294 n n S O1S MES doub 295 n n S O2S MES doub 296 n n S O3S MES sing 297 n n # _atom_sites.entry_id 8K9U _atom_sites.fract_transf_matrix[1][1] 0.014344 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010839 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006149 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 LYS A 1 601 600 LYS LYS . D 3 JSL A 1 602 701 JSL LIG . E 4 MES B 1 601 702 MES MES . F 2 LYS B 1 602 600 LYS LYS . G 3 JSL B 1 603 701 JSL LIG . H 5 HOH A 1 701 47 HOH HOH . H 5 HOH A 2 702 28 HOH HOH . H 5 HOH A 3 703 48 HOH HOH . H 5 HOH A 4 704 82 HOH HOH . H 5 HOH A 5 705 31 HOH HOH . H 5 HOH A 6 706 34 HOH HOH . H 5 HOH A 7 707 56 HOH HOH . H 5 HOH A 8 708 85 HOH HOH . H 5 HOH A 9 709 36 HOH HOH . H 5 HOH A 10 710 18 HOH HOH . H 5 HOH A 11 711 17 HOH HOH . H 5 HOH A 12 712 53 HOH HOH . H 5 HOH A 13 713 20 HOH HOH . H 5 HOH A 14 714 74 HOH HOH . H 5 HOH A 15 715 77 HOH HOH . H 5 HOH A 16 716 83 HOH HOH . H 5 HOH A 17 717 9 HOH HOH . H 5 HOH A 18 718 3 HOH HOH . H 5 HOH A 19 719 57 HOH HOH . H 5 HOH A 20 720 50 HOH HOH . H 5 HOH A 21 721 7 HOH HOH . H 5 HOH A 22 722 69 HOH HOH . H 5 HOH A 23 723 87 HOH HOH . H 5 HOH A 24 724 33 HOH HOH . H 5 HOH A 25 725 15 HOH HOH . H 5 HOH A 26 726 22 HOH HOH . H 5 HOH A 27 727 8 HOH HOH . H 5 HOH A 28 728 13 HOH HOH . H 5 HOH A 29 729 89 HOH HOH . H 5 HOH A 30 730 2 HOH HOH . H 5 HOH A 31 731 4 HOH HOH . H 5 HOH A 32 732 43 HOH HOH . H 5 HOH A 33 733 21 HOH HOH . H 5 HOH A 34 734 32 HOH HOH . H 5 HOH A 35 735 24 HOH HOH . H 5 HOH A 36 736 39 HOH HOH . H 5 HOH A 37 737 1 HOH HOH . H 5 HOH A 38 738 14 HOH HOH . H 5 HOH A 39 739 5 HOH HOH . H 5 HOH A 40 740 41 HOH HOH . H 5 HOH A 41 741 75 HOH HOH . H 5 HOH A 42 742 84 HOH HOH . H 5 HOH A 43 743 26 HOH HOH . H 5 HOH A 44 744 42 HOH HOH . H 5 HOH A 45 745 94 HOH HOH . H 5 HOH A 46 746 78 HOH HOH . H 5 HOH A 47 747 29 HOH HOH . H 5 HOH A 48 748 79 HOH HOH . H 5 HOH A 49 749 52 HOH HOH . H 5 HOH A 50 750 40 HOH HOH . H 5 HOH A 51 751 64 HOH HOH . H 5 HOH A 52 752 91 HOH HOH . H 5 HOH A 53 753 81 HOH HOH . H 5 HOH A 54 754 90 HOH HOH . H 5 HOH A 55 755 80 HOH HOH . H 5 HOH A 56 756 76 HOH HOH . H 5 HOH A 57 757 49 HOH HOH . H 5 HOH A 58 758 45 HOH HOH . I 5 HOH B 1 701 46 HOH HOH . I 5 HOH B 2 702 12 HOH HOH . I 5 HOH B 3 703 61 HOH HOH . I 5 HOH B 4 704 97 HOH HOH . I 5 HOH B 5 705 27 HOH HOH . I 5 HOH B 6 706 10 HOH HOH . I 5 HOH B 7 707 63 HOH HOH . I 5 HOH B 8 708 30 HOH HOH . I 5 HOH B 9 709 23 HOH HOH . I 5 HOH B 10 710 54 HOH HOH . I 5 HOH B 11 711 6 HOH HOH . I 5 HOH B 12 712 37 HOH HOH . I 5 HOH B 13 713 68 HOH HOH . I 5 HOH B 14 714 11 HOH HOH . I 5 HOH B 15 715 19 HOH HOH . I 5 HOH B 16 716 59 HOH HOH . I 5 HOH B 17 717 25 HOH HOH . I 5 HOH B 18 718 51 HOH HOH . I 5 HOH B 19 719 16 HOH HOH . I 5 HOH B 20 720 35 HOH HOH . I 5 HOH B 21 721 65 HOH HOH . I 5 HOH B 22 722 92 HOH HOH . I 5 HOH B 23 723 60 HOH HOH . I 5 HOH B 24 724 67 HOH HOH . I 5 HOH B 25 725 70 HOH HOH . I 5 HOH B 26 726 71 HOH HOH . I 5 HOH B 27 727 72 HOH HOH . I 5 HOH B 28 728 98 HOH HOH . I 5 HOH B 29 729 95 HOH HOH . I 5 HOH B 30 730 96 HOH HOH . I 5 HOH B 31 731 66 HOH HOH . I 5 HOH B 32 732 93 HOH HOH . I 5 HOH B 33 733 58 HOH HOH . I 5 HOH B 34 734 88 HOH HOH . I 5 HOH B 35 735 73 HOH HOH . I 5 HOH B 36 736 62 HOH HOH . I 5 HOH B 37 737 44 HOH HOH . I 5 HOH B 38 738 86 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 MES . . . E 4 11.716 -18.508 -60.973 1 54.23 ? O1 MES 601 B 1 HETATM 2 C C2 MES . . . E 4 10.807 -19.415 -60.341 1 58.93 ? C2 MES 601 B 1 HETATM 3 C C3 MES . . . E 4 11.465 -20.357 -59.336 1 64.35 ? C3 MES 601 B 1 HETATM 4 N N4 MES . . . E 4 12.17 -19.524 -58.373 1 64.34 ? N4 MES 601 B 1 HETATM 5 C C5 MES . . . E 4 12.81 -18.291 -58.806 1 57.9 ? C5 MES 601 B 1 HETATM 6 C C6 MES . . . E 4 12.971 -18.347 -60.317 1 53.94 ? C6 MES 601 B 1 HETATM 7 C C7 MES . . . E 4 12.27 -19.941 -56.975 1 65.98 ? C7 MES 601 B 1 HETATM 8 C C8 MES . . . E 4 13.754 -19.839 -56.63 1 56.69 ? C8 MES 601 B 1 HETATM 9 S S MES . . . E 4 13.949 -19.176 -55.117 1 47.81 ? S MES 601 B 1 HETATM 10 O O1S MES . . . E 4 15.358 -19.339 -54.698 1 49.75 ? O1S MES 601 B 1 HETATM 11 O O2S MES . . . E 4 13.644 -17.731 -55.197 1 64.44 ? O2S MES 601 B 1 HETATM 12 O O3S MES . . . E 4 13.065 -19.821 -54.121 1 48.54 ? O3S MES 601 B 1 # _model_server_stats.io_time_ms 100 _model_server_stats.parse_time_ms 84 _model_server_stats.create_model_time_ms 37 _model_server_stats.query_time_ms 450 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 12 #