data_8K9X # _model_server_result.job_id wHFnRNw00WkbLp1zPRJfbQ _model_server_result.datetime_utc '2024-12-04 19:58:19' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8k9x # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":601}' # _entry.id 8K9X # _exptl.entry_id 8K9X _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 572.68 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (2~{S})-2,6-bis(azanyl)-~{N}-[3-[2-[[4-[(2,5-dimethoxyphenyl)amino]-1,3,5-triazin-2-yl]amino]phenyl]sulfonylpropyl]hexanamide _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8K9X _cell.length_a 71.671 _cell.length_b 99.494 _cell.length_c 171.42 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8K9X _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 442 A CYS 517 1_555 A SG CYS 465 A CYS 540 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.044 ? disulf ? disulf2 B SG CYS 442 B CYS 517 1_555 B SG CYS 465 B CYS 540 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.046 ? # _chem_comp.formula 'C26 H36 N8 O5 S' _chem_comp.formula_weight 572.68 _chem_comp.id JUA _chem_comp.mon_nstd_flag . _chem_comp.name (2~{S})-2,6-bis(azanyl)-~{N}-[3-[2-[[4-[(2,5-dimethoxyphenyl)amino]-1,3,5-triazin-2-yl]amino]phenyl]sulfonylpropyl]hexanamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N2 C5 JUA doub 173 n y N2 C4 JUA sing 174 n y C5 N3 JUA sing 175 n y C1 O1 JUA sing 176 n n O1 C2 JUA sing 177 n n N1 C4 JUA sing 178 n n N1 C3 JUA sing 179 n n C4 N8 JUA doub 180 n y N3 C6 JUA doub 181 n y C2 C3 JUA doub 182 n y C2 C26 JUA sing 183 n y C3 C22 JUA sing 184 n y N8 C6 JUA sing 185 n y C6 N4 JUA sing 186 n n C26 C25 JUA doub 187 n y C22 C23 JUA doub 188 n y N4 C7 JUA sing 189 n n C13 C14 JUA sing 190 n n C13 S1 JUA sing 191 n n C25 C23 JUA sing 192 n y C23 O5 JUA sing 193 n n O2 S1 JUA doub 194 n n C7 C8 JUA doub 195 n y C7 C12 JUA sing 196 n y O3 C16 JUA doub 197 n n C14 C15 JUA sing 198 n n S1 C12 JUA sing 199 n n S1 O4 JUA doub 200 n n C8 C9 JUA sing 201 n y O5 C24 JUA sing 202 n n C12 C11 JUA doub 203 n y C15 N5 JUA sing 204 n n C16 N5 JUA sing 205 n n C16 C17 JUA sing 206 n n N7 C17 JUA sing 207 n n C9 C10 JUA doub 208 n y C17 C18 JUA sing 209 n n C18 C19 JUA sing 210 n n C11 C10 JUA sing 211 n y C19 C20 JUA sing 212 n n C20 C21 JUA sing 213 n n N6 C21 JUA sing 214 n n N1 H1 JUA sing 215 n n C5 H2 JUA sing 216 n n C8 H3 JUA sing 217 n n C10 H4 JUA sing 218 n n C13 H5 JUA sing 219 n n C13 H6 JUA sing 220 n n C15 H7 JUA sing 221 n n C15 H8 JUA sing 222 n n C17 H9 JUA sing 223 n n C20 H10 JUA sing 224 n n C20 H11 JUA sing 225 n n C21 H12 JUA sing 226 n n C21 H13 JUA sing 227 n n C22 H14 JUA sing 228 n n C24 H15 JUA sing 229 n n C24 H16 JUA sing 230 n n C24 H17 JUA sing 231 n n C26 H18 JUA sing 232 n n C1 H19 JUA sing 233 n n C1 H20 JUA sing 234 n n C1 H21 JUA sing 235 n n C11 H22 JUA sing 236 n n C14 H23 JUA sing 237 n n C14 H24 JUA sing 238 n n C18 H25 JUA sing 239 n n C18 H26 JUA sing 240 n n C19 H27 JUA sing 241 n n C19 H28 JUA sing 242 n n C25 H29 JUA sing 243 n n C9 H30 JUA sing 244 n n N4 H31 JUA sing 245 n n N5 H32 JUA sing 246 n n N6 H33 JUA sing 247 n n N6 H34 JUA sing 248 n n N7 H36 JUA sing 249 n n N7 H37 JUA sing 250 n n # _atom_sites.entry_id 8K9X _atom_sites.fract_transf_matrix[1][1] 0.013953 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010051 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005834 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 JUA A 1 601 601 JUA JUA . D 3 MES A 1 602 602 MES MES . E 3 MES A 1 603 602 MES MES . F 2 JUA B 1 601 601 JUA JUA . G 4 HOH A 1 701 113 HOH HOH . G 4 HOH A 2 702 52 HOH HOH . G 4 HOH A 3 703 105 HOH HOH . G 4 HOH A 4 704 89 HOH HOH . G 4 HOH A 5 705 68 HOH HOH . G 4 HOH A 6 706 111 HOH HOH . G 4 HOH A 7 707 23 HOH HOH . G 4 HOH A 8 708 112 HOH HOH . G 4 HOH A 9 709 47 HOH HOH . G 4 HOH A 10 710 93 HOH HOH . G 4 HOH A 11 711 60 HOH HOH . G 4 HOH A 12 712 43 HOH HOH . G 4 HOH A 13 713 74 HOH HOH . G 4 HOH A 14 714 127 HOH HOH . G 4 HOH A 15 715 75 HOH HOH . G 4 HOH A 16 716 18 HOH HOH . G 4 HOH A 17 717 114 HOH HOH . G 4 HOH A 18 718 42 HOH HOH . G 4 HOH A 19 719 7 HOH HOH . G 4 HOH A 20 720 51 HOH HOH . G 4 HOH A 21 721 70 HOH HOH . G 4 HOH A 22 722 67 HOH HOH . G 4 HOH A 23 723 56 HOH HOH . G 4 HOH A 24 724 27 HOH HOH . G 4 HOH A 25 725 46 HOH HOH . G 4 HOH A 26 726 77 HOH HOH . G 4 HOH A 27 727 48 HOH HOH . G 4 HOH A 28 728 63 HOH HOH . G 4 HOH A 29 729 36 HOH HOH . G 4 HOH A 30 730 17 HOH HOH . G 4 HOH A 31 731 64 HOH HOH . G 4 HOH A 32 732 44 HOH HOH . G 4 HOH A 33 733 59 HOH HOH . G 4 HOH A 34 734 50 HOH HOH . G 4 HOH A 35 735 37 HOH HOH . G 4 HOH A 36 736 66 HOH HOH . G 4 HOH A 37 737 62 HOH HOH . G 4 HOH A 38 738 25 HOH HOH . G 4 HOH A 39 739 76 HOH HOH . G 4 HOH A 40 740 19 HOH HOH . G 4 HOH A 41 741 87 HOH HOH . G 4 HOH A 42 742 29 HOH HOH . G 4 HOH A 43 743 84 HOH HOH . G 4 HOH A 44 744 100 HOH HOH . G 4 HOH A 45 745 79 HOH HOH . G 4 HOH A 46 746 35 HOH HOH . G 4 HOH A 47 747 104 HOH HOH . G 4 HOH A 48 748 6 HOH HOH . G 4 HOH A 49 749 97 HOH HOH . G 4 HOH A 50 750 86 HOH HOH . G 4 HOH A 51 751 126 HOH HOH . G 4 HOH A 52 752 121 HOH HOH . G 4 HOH A 53 753 39 HOH HOH . G 4 HOH A 54 754 61 HOH HOH . G 4 HOH A 55 755 90 HOH HOH . G 4 HOH A 56 756 115 HOH HOH . G 4 HOH A 57 757 13 HOH HOH . G 4 HOH A 58 758 98 HOH HOH . G 4 HOH A 59 759 8 HOH HOH . G 4 HOH A 60 760 72 HOH HOH . G 4 HOH A 61 761 15 HOH HOH . H 4 HOH B 1 701 120 HOH HOH . H 4 HOH B 2 702 91 HOH HOH . H 4 HOH B 3 703 129 HOH HOH . H 4 HOH B 4 704 94 HOH HOH . H 4 HOH B 5 705 101 HOH HOH . H 4 HOH B 6 706 99 HOH HOH . H 4 HOH B 7 707 1 HOH HOH . H 4 HOH B 8 708 21 HOH HOH . H 4 HOH B 9 709 82 HOH HOH . H 4 HOH B 10 710 53 HOH HOH . H 4 HOH B 11 711 24 HOH HOH . H 4 HOH B 12 712 16 HOH HOH . H 4 HOH B 13 713 54 HOH HOH . H 4 HOH B 14 714 3 HOH HOH . H 4 HOH B 15 715 11 HOH HOH . H 4 HOH B 16 716 124 HOH HOH . H 4 HOH B 17 717 65 HOH HOH . H 4 HOH B 18 718 88 HOH HOH . H 4 HOH B 19 719 26 HOH HOH . H 4 HOH B 20 720 45 HOH HOH . H 4 HOH B 21 721 32 HOH HOH . H 4 HOH B 22 722 110 HOH HOH . H 4 HOH B 23 723 81 HOH HOH . H 4 HOH B 24 724 123 HOH HOH . H 4 HOH B 25 725 31 HOH HOH . H 4 HOH B 26 726 102 HOH HOH . H 4 HOH B 27 727 4 HOH HOH . H 4 HOH B 28 728 71 HOH HOH . H 4 HOH B 29 729 5 HOH HOH . H 4 HOH B 30 730 49 HOH HOH . H 4 HOH B 31 731 106 HOH HOH . H 4 HOH B 32 732 41 HOH HOH . H 4 HOH B 33 733 12 HOH HOH . H 4 HOH B 34 734 107 HOH HOH . H 4 HOH B 35 735 58 HOH HOH . H 4 HOH B 36 736 73 HOH HOH . H 4 HOH B 37 737 125 HOH HOH . H 4 HOH B 38 738 9 HOH HOH . H 4 HOH B 39 739 14 HOH HOH . H 4 HOH B 40 740 22 HOH HOH . H 4 HOH B 41 741 85 HOH HOH . H 4 HOH B 42 742 69 HOH HOH . H 4 HOH B 43 743 108 HOH HOH . H 4 HOH B 44 744 92 HOH HOH . H 4 HOH B 45 745 128 HOH HOH . H 4 HOH B 46 746 10 HOH HOH . H 4 HOH B 47 747 122 HOH HOH . H 4 HOH B 48 748 55 HOH HOH . H 4 HOH B 49 749 33 HOH HOH . H 4 HOH B 50 750 34 HOH HOH . H 4 HOH B 51 751 20 HOH HOH . H 4 HOH B 52 752 118 HOH HOH . H 4 HOH B 53 753 119 HOH HOH . H 4 HOH B 54 754 38 HOH HOH . H 4 HOH B 55 755 28 HOH HOH . H 4 HOH B 56 756 2 HOH HOH . H 4 HOH B 57 757 103 HOH HOH . H 4 HOH B 58 758 57 HOH HOH . H 4 HOH B 59 759 40 HOH HOH . H 4 HOH B 60 760 78 HOH HOH . H 4 HOH B 61 761 83 HOH HOH . H 4 HOH B 62 762 95 HOH HOH . H 4 HOH B 63 763 117 HOH HOH . H 4 HOH B 64 764 30 HOH HOH . H 4 HOH B 65 765 96 HOH HOH . H 4 HOH B 66 766 109 HOH HOH . H 4 HOH B 67 767 116 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 JUA . . . C 2 -0.124 5.048 -34.937 1 36.69 ? N1 JUA 601 A 1 HETATM 2 N N3 JUA . . . C 2 1.004 1.073 -34.731 1 40.54 ? N3 JUA 601 A 1 HETATM 3 C C4 JUA . . . C 2 0.254 3.625 -34.796 1 37.84 ? C4 JUA 601 A 1 HETATM 4 C C5 JUA . . . C 2 1.201 1.788 -35.829 1 37.29 ? C5 JUA 601 A 1 HETATM 5 C C6 JUA . . . C 2 0.428 1.613 -33.663 1 41.77 ? C6 JUA 601 A 1 HETATM 6 C C7 JUA . . . C 2 -0.221 1.162 -31.145 1 39.61 ? C7 JUA 601 A 1 HETATM 7 C C8 JUA . . . C 2 -0.006 2.448 -30.693 1 42.21 ? C8 JUA 601 A 1 HETATM 8 C C10 JUA . . . C 2 -1.144 1.909 -28.607 1 43.34 ? C10 JUA 601 A 1 HETATM 9 C C13 JUA . . . C 2 -2.739 -1.448 -31.918 1 43.9 ? C13 JUA 601 A 1 HETATM 10 C C15 JUA . . . C 2 -4.586 -1.94 -30.29 1 47.06 ? C15 JUA 601 A 1 HETATM 11 C C17 JUA . . . C 2 -8.206 -0.62 -29.3 1 52.76 ? C17 JUA 601 A 1 HETATM 12 C C20 JUA . . . C 2 -10.331 -3.595 -27.833 1 47.03 ? C20 JUA 601 A 1 HETATM 13 C C21 JUA . . . C 2 -11.07 -3.032 -26.596 1 55.71 ? C21 JUA 601 A 1 HETATM 14 C C22 JUA . . . C 2 -1.364 5.447 -32.781 1 41.58 ? C22 JUA 601 A 1 HETATM 15 C C24 JUA . . . C 2 -1.988 6.202 -29.525 1 44.58 ? C24 JUA 601 A 1 HETATM 16 C C26 JUA . . . C 2 -0.853 8.181 -32.992 1 38.91 ? C26 JUA 601 A 1 HETATM 17 C C1 JUA . . . C 2 0.338 9.123 -35.235 1 44.4 ? C1 JUA 601 A 1 HETATM 18 C C11 JUA . . . C 2 -1.349 0.617 -29.055 1 40.7 ? C11 JUA 601 A 1 HETATM 19 C C12 JUA . . . C 2 -0.886 0.256 -30.313 1 40.9 ? C12 JUA 601 A 1 HETATM 20 C C14 JUA . . . C 2 -3.975 -0.852 -31.216 1 44.13 ? C14 JUA 601 A 1 HETATM 21 C C16 JUA . . . C 2 -7.016 -1.085 -30.164 1 53.15 ? C16 JUA 601 A 1 HETATM 22 C C18 JUA . . . C 2 -9.241 -1.767 -29.279 1 53.27 ? C18 JUA 601 A 1 HETATM 23 C C19 JUA . . . C 2 -9.031 -2.791 -28.133 1 46.88 ? C19 JUA 601 A 1 HETATM 24 C C2 JUA . . . C 2 -0.383 7.287 -33.959 1 40.27 ? C2 JUA 601 A 1 HETATM 25 C C23 JUA . . . C 2 -1.854 6.342 -31.825 1 43.7 ? C23 JUA 601 A 1 HETATM 26 C C25 JUA . . . C 2 -1.588 7.701 -31.904 1 41.78 ? C25 JUA 601 A 1 HETATM 27 C C3 JUA . . . C 2 -0.627 5.93 -33.858 1 39.61 ? C3 JUA 601 A 1 HETATM 28 C C9 JUA . . . C 2 -0.478 2.822 -29.428 1 47.19 ? C9 JUA 601 A 1 HETATM 29 N N2 JUA . . . C 2 0.825 3.066 -35.84 1 40.04 ? N2 JUA 601 A 1 HETATM 30 N N4 JUA . . . C 2 0.25 0.721 -32.471 1 42 ? N4 JUA 601 A 1 HETATM 31 N N5 JUA . . . C 2 -5.747 -1.466 -29.508 1 52 ? N5 JUA 601 A 1 HETATM 32 N N6 JUA . . . C 2 -12.514 -2.913 -26.803 1 48.59 ? N6 JUA 601 A 1 HETATM 33 N N7 JUA . . . C 2 -8.793 0.565 -29.867 1 52.7 ? N7 JUA 601 A 1 HETATM 34 N N8 JUA . . . C 2 0.036 2.898 -33.694 1 39.43 ? N8 JUA 601 A 1 HETATM 35 O O1 JUA . . . C 2 0.36 7.735 -35.054 1 39.5 ? O1 JUA 601 A 1 HETATM 36 O O2 JUA . . . C 2 -0.067 -1.97 -31.948 1 43.55 ? O2 JUA 601 A 1 HETATM 37 O O3 JUA . . . C 2 -7.121 -1.14 -31.336 1 53.12 ? O3 JUA 601 A 1 HETATM 38 O O4 JUA . . . C 2 -1.239 -2.438 -29.566 1 43.36 ? O4 JUA 601 A 1 HETATM 39 O O5 JUA . . . C 2 -2.595 5.839 -30.742 1 43.75 ? O5 JUA 601 A 1 HETATM 40 S S1 JUA . . . C 2 -1.204 -1.448 -30.892 1 39.04 ? S1 JUA 601 A 1 # _model_server_stats.io_time_ms 30 _model_server_stats.parse_time_ms 21 _model_server_stats.create_model_time_ms 105 _model_server_stats.query_time_ms 477 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 40 #