data_8K9X # _model_server_result.job_id nI3TGHT2V4XavZjyPGMENA _model_server_result.datetime_utc '2024-12-04 20:23:04' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8k9x # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":603}' # _entry.id 8K9X # _exptl.entry_id 8K9X _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 195.237 _entity.id 3 _entity.src_method nat _entity.type non-polymer _entity.pdbx_description '2-(N-MORPHOLINO)-ETHANESULFONIC ACID' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8K9X _cell.length_a 71.671 _cell.length_b 99.494 _cell.length_c 171.42 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8K9X _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 442 A CYS 517 1_555 A SG CYS 465 A CYS 540 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.044 ? disulf ? disulf2 B SG CYS 442 B CYS 517 1_555 B SG CYS 465 B CYS 540 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.046 ? # _chem_comp.formula 'C6 H13 N O4 S' _chem_comp.formula_weight 195.237 _chem_comp.id MES _chem_comp.mon_nstd_flag . _chem_comp.name '2-(N-MORPHOLINO)-ETHANESULFONIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C2 MES sing 296 n n O1 C6 MES sing 297 n n C2 C3 MES sing 298 n n C2 H21 MES sing 299 n n C2 H22 MES sing 300 n n C3 N4 MES sing 301 n n C3 H31 MES sing 302 n n C3 H32 MES sing 303 n n N4 C5 MES sing 304 n n N4 C7 MES sing 305 n n N4 HN4 MES sing 306 n n C5 C6 MES sing 307 n n C5 H51 MES sing 308 n n C5 H52 MES sing 309 n n C6 H61 MES sing 310 n n C6 H62 MES sing 311 n n C7 C8 MES sing 312 n n C7 H71 MES sing 313 n n C7 H72 MES sing 314 n n C8 S MES sing 315 n n C8 H81 MES sing 316 n n C8 H82 MES sing 317 n n S O1S MES doub 318 n n S O2S MES doub 319 n n S O3S MES sing 320 n n # _atom_sites.entry_id 8K9X _atom_sites.fract_transf_matrix[1][1] 0.013953 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010051 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005834 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 JUA A 1 601 601 JUA JUA . D 3 MES A 1 602 602 MES MES . E 3 MES A 1 603 602 MES MES . F 2 JUA B 1 601 601 JUA JUA . G 4 HOH A 1 701 113 HOH HOH . G 4 HOH A 2 702 52 HOH HOH . G 4 HOH A 3 703 105 HOH HOH . G 4 HOH A 4 704 89 HOH HOH . G 4 HOH A 5 705 68 HOH HOH . G 4 HOH A 6 706 111 HOH HOH . G 4 HOH A 7 707 23 HOH HOH . G 4 HOH A 8 708 112 HOH HOH . G 4 HOH A 9 709 47 HOH HOH . G 4 HOH A 10 710 93 HOH HOH . G 4 HOH A 11 711 60 HOH HOH . G 4 HOH A 12 712 43 HOH HOH . G 4 HOH A 13 713 74 HOH HOH . G 4 HOH A 14 714 127 HOH HOH . G 4 HOH A 15 715 75 HOH HOH . G 4 HOH A 16 716 18 HOH HOH . G 4 HOH A 17 717 114 HOH HOH . G 4 HOH A 18 718 42 HOH HOH . G 4 HOH A 19 719 7 HOH HOH . G 4 HOH A 20 720 51 HOH HOH . G 4 HOH A 21 721 70 HOH HOH . G 4 HOH A 22 722 67 HOH HOH . G 4 HOH A 23 723 56 HOH HOH . G 4 HOH A 24 724 27 HOH HOH . G 4 HOH A 25 725 46 HOH HOH . G 4 HOH A 26 726 77 HOH HOH . G 4 HOH A 27 727 48 HOH HOH . G 4 HOH A 28 728 63 HOH HOH . G 4 HOH A 29 729 36 HOH HOH . G 4 HOH A 30 730 17 HOH HOH . G 4 HOH A 31 731 64 HOH HOH . G 4 HOH A 32 732 44 HOH HOH . G 4 HOH A 33 733 59 HOH HOH . G 4 HOH A 34 734 50 HOH HOH . G 4 HOH A 35 735 37 HOH HOH . G 4 HOH A 36 736 66 HOH HOH . G 4 HOH A 37 737 62 HOH HOH . G 4 HOH A 38 738 25 HOH HOH . G 4 HOH A 39 739 76 HOH HOH . G 4 HOH A 40 740 19 HOH HOH . G 4 HOH A 41 741 87 HOH HOH . G 4 HOH A 42 742 29 HOH HOH . G 4 HOH A 43 743 84 HOH HOH . G 4 HOH A 44 744 100 HOH HOH . G 4 HOH A 45 745 79 HOH HOH . G 4 HOH A 46 746 35 HOH HOH . G 4 HOH A 47 747 104 HOH HOH . G 4 HOH A 48 748 6 HOH HOH . G 4 HOH A 49 749 97 HOH HOH . G 4 HOH A 50 750 86 HOH HOH . G 4 HOH A 51 751 126 HOH HOH . G 4 HOH A 52 752 121 HOH HOH . G 4 HOH A 53 753 39 HOH HOH . G 4 HOH A 54 754 61 HOH HOH . G 4 HOH A 55 755 90 HOH HOH . G 4 HOH A 56 756 115 HOH HOH . G 4 HOH A 57 757 13 HOH HOH . G 4 HOH A 58 758 98 HOH HOH . G 4 HOH A 59 759 8 HOH HOH . G 4 HOH A 60 760 72 HOH HOH . G 4 HOH A 61 761 15 HOH HOH . H 4 HOH B 1 701 120 HOH HOH . H 4 HOH B 2 702 91 HOH HOH . H 4 HOH B 3 703 129 HOH HOH . H 4 HOH B 4 704 94 HOH HOH . H 4 HOH B 5 705 101 HOH HOH . H 4 HOH B 6 706 99 HOH HOH . H 4 HOH B 7 707 1 HOH HOH . H 4 HOH B 8 708 21 HOH HOH . H 4 HOH B 9 709 82 HOH HOH . H 4 HOH B 10 710 53 HOH HOH . H 4 HOH B 11 711 24 HOH HOH . H 4 HOH B 12 712 16 HOH HOH . H 4 HOH B 13 713 54 HOH HOH . H 4 HOH B 14 714 3 HOH HOH . H 4 HOH B 15 715 11 HOH HOH . H 4 HOH B 16 716 124 HOH HOH . H 4 HOH B 17 717 65 HOH HOH . H 4 HOH B 18 718 88 HOH HOH . H 4 HOH B 19 719 26 HOH HOH . H 4 HOH B 20 720 45 HOH HOH . H 4 HOH B 21 721 32 HOH HOH . H 4 HOH B 22 722 110 HOH HOH . H 4 HOH B 23 723 81 HOH HOH . H 4 HOH B 24 724 123 HOH HOH . H 4 HOH B 25 725 31 HOH HOH . H 4 HOH B 26 726 102 HOH HOH . H 4 HOH B 27 727 4 HOH HOH . H 4 HOH B 28 728 71 HOH HOH . H 4 HOH B 29 729 5 HOH HOH . H 4 HOH B 30 730 49 HOH HOH . H 4 HOH B 31 731 106 HOH HOH . H 4 HOH B 32 732 41 HOH HOH . H 4 HOH B 33 733 12 HOH HOH . H 4 HOH B 34 734 107 HOH HOH . H 4 HOH B 35 735 58 HOH HOH . H 4 HOH B 36 736 73 HOH HOH . H 4 HOH B 37 737 125 HOH HOH . H 4 HOH B 38 738 9 HOH HOH . H 4 HOH B 39 739 14 HOH HOH . H 4 HOH B 40 740 22 HOH HOH . H 4 HOH B 41 741 85 HOH HOH . H 4 HOH B 42 742 69 HOH HOH . H 4 HOH B 43 743 108 HOH HOH . H 4 HOH B 44 744 92 HOH HOH . H 4 HOH B 45 745 128 HOH HOH . H 4 HOH B 46 746 10 HOH HOH . H 4 HOH B 47 747 122 HOH HOH . H 4 HOH B 48 748 55 HOH HOH . H 4 HOH B 49 749 33 HOH HOH . H 4 HOH B 50 750 34 HOH HOH . H 4 HOH B 51 751 20 HOH HOH . H 4 HOH B 52 752 118 HOH HOH . H 4 HOH B 53 753 119 HOH HOH . H 4 HOH B 54 754 38 HOH HOH . H 4 HOH B 55 755 28 HOH HOH . H 4 HOH B 56 756 2 HOH HOH . H 4 HOH B 57 757 103 HOH HOH . H 4 HOH B 58 758 57 HOH HOH . H 4 HOH B 59 759 40 HOH HOH . H 4 HOH B 60 760 78 HOH HOH . H 4 HOH B 61 761 83 HOH HOH . H 4 HOH B 62 762 95 HOH HOH . H 4 HOH B 63 763 117 HOH HOH . H 4 HOH B 64 764 30 HOH HOH . H 4 HOH B 65 765 96 HOH HOH . H 4 HOH B 66 766 109 HOH HOH . H 4 HOH B 67 767 116 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 MES . . . E 3 -15.921 -18.536 -19.473 1 55.61 ? O1 MES 603 A 1 HETATM 2 C C2 MES . . . E 3 -15.428 -19.825 -19.846 1 59.2 ? C2 MES 603 A 1 HETATM 3 C C3 MES . . . E 3 -14.9 -19.848 -21.277 1 54.09 ? C3 MES 603 A 1 HETATM 4 N N4 MES . . . E 3 -15.944 -19.278 -22.114 1 56.81 ? N4 MES 603 A 1 HETATM 5 C C5 MES . . . E 3 -17.222 -18.866 -21.538 1 58.47 ? C5 MES 603 A 1 HETATM 6 C C6 MES . . . E 3 -16.979 -18.029 -20.28 1 52.02 ? C6 MES 603 A 1 HETATM 7 C C7 MES . . . E 3 -15.838 -19.487 -23.547 1 57.28 ? C7 MES 603 A 1 HETATM 8 C C8 MES . . . E 3 -17.2 -19.144 -24.129 1 59.82 ? C8 MES 603 A 1 HETATM 9 S S MES . . . E 3 -17.202 -19.509 -25.75 1 67.11 ? S MES 603 A 1 HETATM 10 O O1S MES . . . E 3 -18.565 -19.383 -26.268 1 64.1 ? O1S MES 603 A 1 HETATM 11 O O2S MES . . . E 3 -16.677 -20.876 -25.981 1 66.26 ? O2S MES 603 A 1 HETATM 12 O O3S MES . . . E 3 -16.388 -18.521 -26.475 1 64.16 ? O3S MES 603 A 1 # _model_server_stats.io_time_ms 25 _model_server_stats.parse_time_ms 46 _model_server_stats.create_model_time_ms 29 _model_server_stats.query_time_ms 295 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 12 #