data_8KB7 # _model_server_result.job_id i1Xhteqr48Pw7wHNpZ1yKA _model_server_result.datetime_utc '2024-11-16 11:30:47' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8kb7 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"M","auth_seq_id":604}' # _entry.id 8KB7 # _exptl.entry_id 8KB7 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 35.453 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CHLORIDE ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8KB7 _cell.length_a 145.019 _cell.length_b 150.002 _cell.length_c 191.481 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8KB7 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 I N N ? 5 M N N ? 5 R N N ? 5 V N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 47 A CYS 69 1_555 A SG CYS 57 A CYS 79 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? disulf ? disulf2 A SG CYS 63 A CYS 85 1_555 A SG CYS 206 A CYS 228 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.015 ? disulf ? disulf3 A SG CYS 414 A CYS 436 1_555 A SG CYS 415 A CYS 437 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.151 ? disulf ? disulf4 A SG CYS 468 A CYS 490 1_555 A SG CYS 556 A CYS 578 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.045 ? disulf ? disulf5 B SG CYS 47 B CYS 69 1_555 B SG CYS 57 B CYS 79 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? disulf ? disulf6 B SG CYS 63 B CYS 85 1_555 B SG CYS 206 B CYS 228 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.015 ? disulf ? disulf7 B SG CYS 414 B CYS 436 1_555 B SG CYS 415 B CYS 437 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.101 ? disulf ? disulf8 B SG CYS 468 B CYS 490 1_555 B SG CYS 556 B CYS 578 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.051 ? disulf ? disulf9 C SG CYS 47 C CYS 69 1_555 C SG CYS 57 C CYS 79 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.018 ? disulf ? disulf10 C SG CYS 63 C CYS 85 1_555 C SG CYS 206 C CYS 228 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf11 C SG CYS 414 C CYS 436 1_555 C SG CYS 415 C CYS 437 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.117 ? disulf ? disulf12 C SG CYS 468 C CYS 490 1_555 C SG CYS 556 C CYS 578 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? disulf ? disulf13 D SG CYS 47 D CYS 69 1_555 D SG CYS 57 D CYS 79 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.045 ? disulf ? disulf14 D SG CYS 63 D CYS 85 1_555 D SG CYS 206 D CYS 228 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.056 ? disulf ? disulf15 D SG CYS 414 D CYS 436 1_555 D SG CYS 415 D CYS 437 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.086 ? disulf ? disulf16 D SG CYS 468 D CYS 490 1_555 D SG CYS 556 D CYS 578 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? covale ? covale1 A ND2 ASN 77 A ASN 99 1_555 F C1 NAG . A NAG 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.472 ? covale ? covale2 A ND2 ASN 254 A ASN 276 1_555 G C1 NAG . A NAG 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.485 ? covale ? covale3 B ND2 ASN 77 B ASN 99 1_555 K C1 NAG . B NAG 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.462 ? covale ? covale4 C ND2 ASN 77 C ASN 99 1_555 O C1 NAG . C NAG 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.451 ? covale ? covale5 C ND2 ASN 254 C ASN 276 1_555 P C1 NAG . C NAG 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.464 ? covale ? covale6 D ND2 ASN 521 D ASN 543 1_555 T C1 NAG . D NAG 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.469 ? # _chem_comp.formula 'Cl -1' _chem_comp.formula_weight 35.453 _chem_comp.id CL _chem_comp.mon_nstd_flag . _chem_comp.name 'CHLORIDE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 8KB7 _atom_sites.fract_transf_matrix[1][1] 0.006896 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006667 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005222 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 UDP A 1 601 1000 UDP UDP . F 3 NAG A 1 602 1001 NAG NAG . G 3 NAG A 1 603 1003 NAG NAG . H 4 MAN A 1 604 2001 MAN MAN . I 5 CL A 1 605 2 CL CL . J 2 UDP B 1 601 1000 UDP UDP . K 3 NAG B 1 602 1001 NAG NAG . L 4 MAN B 1 603 2001 MAN MAN . M 5 CL B 1 604 1 CL CL . N 2 UDP C 1 601 1000 UDP UDP . O 3 NAG C 1 602 1001 NAG NAG . P 3 NAG C 1 603 1003 NAG NAG . Q 4 MAN C 1 604 2001 MAN MAN . R 5 CL C 1 605 3 CL CL . S 2 UDP D 1 601 1000 UDP UDP . T 3 NAG D 1 602 1004 NAG NAG . U 4 MAN D 1 603 2001 MAN MAN . V 5 CL D 1 604 4 CL CL . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CL _atom_site.label_atom_id CL _atom_site.label_comp_id CL _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id M _atom_site.label_entity_id 5 _atom_site.Cartn_x 78.249 _atom_site.Cartn_y 78.323 _atom_site.Cartn_z 4.011 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 100.69 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CL _atom_site.auth_comp_id CL _atom_site.auth_seq_id 604 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 28 _model_server_stats.create_model_time_ms 24 _model_server_stats.query_time_ms 248 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #