data_8KEX
#
_model_server_result.job_id            O2S5hfdcKqlZeccjWl8Weg 
_model_server_result.datetime_utc      '2024-11-07 03:24:00' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8kex 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":601}' 
#
_entry.id    8KEX 
#
_exptl.entry_id    8KEX 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              472.552 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '(4~{R})-4-[(3~{R},5~{R},8~{R},9~{S},10~{S},12~{S},13~{R},14~{S},17~{R})-10,13-dimethyl-12-oxidanyl-3-phosphonooxy-2,3,4,5,6,7,8,9,11,12,14,15,16,17-tetradecahydro-1~{H}-cyclopenta[a]phenanthren-17-yl]pentanoic acid' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            8KEX 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8KEX 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_struct_conn.conn_type_id                   disulf 
_struct_conn.details                        ? 
_struct_conn.id                             disulf1 
_struct_conn.ptnr1_label_asym_id            A 
_struct_conn.ptnr1_label_atom_id            SG 
_struct_conn.ptnr1_label_comp_id            CYS 
_struct_conn.ptnr1_label_seq_id             139 
_struct_conn.ptnr1_auth_asym_id             E 
_struct_conn.ptnr1_auth_comp_id             CYS 
_struct_conn.ptnr1_auth_seq_id              23 
_struct_conn.ptnr1_symmetry                 1_555 
_struct_conn.ptnr2_label_asym_id            A 
_struct_conn.ptnr2_label_atom_id            SG 
_struct_conn.ptnr2_label_comp_id            CYS 
_struct_conn.ptnr2_label_seq_id             367 
_struct_conn.ptnr2_auth_asym_id             E 
_struct_conn.ptnr2_auth_comp_id             CYS 
_struct_conn.ptnr2_auth_seq_id              251 
_struct_conn.ptnr2_symmetry                 1_555 
_struct_conn.pdbx_ptnr1_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr1_label_alt_id        ? 
_struct_conn.pdbx_ptnr1_standard_comp_id    ? 
_struct_conn.pdbx_ptnr2_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr2_label_alt_id        ? 
_struct_conn.pdbx_ptnr3_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr3_label_alt_id        ? 
_struct_conn.pdbx_ptnr3_label_asym_id       ? 
_struct_conn.pdbx_ptnr3_label_atom_id       ? 
_struct_conn.pdbx_ptnr3_label_comp_id       ? 
_struct_conn.pdbx_ptnr3_label_seq_id        ? 
_struct_conn.pdbx_PDB_id                    ? 
_struct_conn.pdbx_dist_value                2.029 
_struct_conn.pdbx_value_order               ? 
#
_chem_comp.formula           'C24 H41 O7 P' 
_chem_comp.formula_weight    472.552 
_chem_comp.id                JW0 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '(4~{R})-4-[(3~{R},5~{R},8~{R},9~{S},10~{S},12~{S},13~{R},14~{S},17~{R})-10,13-dimethyl-12-oxidanyl-3-phosphonooxy-2,3,4,5,6,7,8,9,11,12,14,15,16,17-tetradecahydro-1~{H}-cyclopenta[a]phenanthren-17-yl]pentanoic acid' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C23 C5 JW0 sing 171 n n 
C1 C6 JW0 sing 172 n n 
C1 C2 JW0 sing 173 n n 
O5 P1 JW0 doub 174 n n 
C6 C5 JW0 sing 175 n n 
O1 C13 JW0 sing 176 n n 
C14 C13 JW0 sing 177 n n 
C14 C10 JW0 sing 178 n n 
C5 C10 JW0 sing 179 n n 
C5 C4 JW0 sing 180 n n 
C2 C3 JW0 sing 181 n n 
C2 O4 JW0 sing 182 n n 
C13 C12 JW0 sing 183 n n 
C10 C9 JW0 sing 184 n n 
P1 O7 JW0 sing 185 n n 
P1 O4 JW0 sing 186 n n 
P1 O6 JW0 sing 187 n n 
C3 C4 JW0 sing 188 n n 
C21 C18 JW0 sing 189 n n 
C4 C7 JW0 sing 190 n n 
C18 C17 JW0 sing 191 n n 
C18 C19 JW0 sing 192 n n 
C12 C17 JW0 sing 193 n n 
C12 C11 JW0 sing 194 n n 
C12 C22 JW0 sing 195 n n 
C17 C16 JW0 sing 196 n n 
C9 C11 JW0 sing 197 n n 
C9 C8 JW0 sing 198 n n 
C11 C15 JW0 sing 199 n n 
C7 C8 JW0 sing 200 n n 
C20 C19 JW0 sing 201 n n 
C20 C24 JW0 sing 202 n n 
O2 C24 JW0 doub 203 n n 
C24 O3 JW0 sing 204 n n 
C16 C15 JW0 sing 205 n n 
C1 H1 JW0 sing 206 n n 
C1 H2 JW0 sing 207 n n 
C2 H3 JW0 sing 208 n n 
C3 H4 JW0 sing 209 n n 
C3 H5 JW0 sing 210 n n 
O3 H6 JW0 sing 211 n n 
C4 H7 JW0 sing 212 n n 
C6 H8 JW0 sing 213 n n 
C6 H9 JW0 sing 214 n n 
C10 H10 JW0 sing 215 n n 
C11 H11 JW0 sing 216 n n 
C13 H12 JW0 sing 217 n n 
C14 H13 JW0 sing 218 n n 
C14 H14 JW0 sing 219 n n 
C15 H15 JW0 sing 220 n n 
C15 H16 JW0 sing 221 n n 
C16 H17 JW0 sing 222 n n 
C16 H18 JW0 sing 223 n n 
C17 H19 JW0 sing 224 n n 
C18 H20 JW0 sing 225 n n 
C19 H21 JW0 sing 226 n n 
C19 H22 JW0 sing 227 n n 
C20 H23 JW0 sing 228 n n 
C20 H24 JW0 sing 229 n n 
C21 H25 JW0 sing 230 n n 
C21 H26 JW0 sing 231 n n 
C21 H27 JW0 sing 232 n n 
C22 H28 JW0 sing 233 n n 
C22 H29 JW0 sing 234 n n 
C22 H30 JW0 sing 235 n n 
C23 H31 JW0 sing 236 n n 
C23 H32 JW0 sing 237 n n 
C23 H33 JW0 sing 238 n n 
C7 H34 JW0 sing 239 n n 
C7 H35 JW0 sing 240 n n 
C8 H36 JW0 sing 241 n n 
C8 H37 JW0 sing 242 n n 
C9 H38 JW0 sing 243 n n 
O1 H39 JW0 sing 244 n n 
O6 H40 JW0 sing 245 n n 
O7 H41 JW0 sing 246 n n 
#
_atom_sites.entry_id                     8KEX 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
_pdbx_nonpoly_scheme.asym_id          B 
_pdbx_nonpoly_scheme.entity_id        2 
_pdbx_nonpoly_scheme.mon_id           JW0 
_pdbx_nonpoly_scheme.pdb_strand_id    E 
_pdbx_nonpoly_scheme.ndb_seq_num      1 
_pdbx_nonpoly_scheme.pdb_seq_num      601 
_pdbx_nonpoly_scheme.auth_seq_num     301 
_pdbx_nonpoly_scheme.pdb_mon_id       JW0 
_pdbx_nonpoly_scheme.auth_mon_id      D3P 
_pdbx_nonpoly_scheme.pdb_ins_code     . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 JW0 . . . B 2 95.67 144.211 135.671 1 103.79 ? C1 JW0 601 E 1 
HETATM 2 C C2 JW0 . . . B 2 94.792 144.272 136.918 1 106.33 ? C2 JW0 601 E 1 
HETATM 3 C C3 JW0 . . . B 2 95.104 145.568 137.697 1 106.67 ? C3 JW0 601 E 1 
HETATM 4 O O3 JW0 . . . B 2 106.629 150.107 140.577 1 104.53 ? O3 JW0 601 E 1 
HETATM 5 C C4 JW0 . . . B 2 96.595 145.823 137.975 1 108.18 ? C4 JW0 601 E 1 
HETATM 6 C C5 JW0 . . . B 2 97.478 145.538 136.776 1 107.28 ? C5 JW0 601 E 1 
HETATM 7 O O5 JW0 . . . B 2 94.119 141.761 135.704 1 106.79 ? O5 JW0 601 E 1 
HETATM 8 C C6 JW0 . . . B 2 97.148 144.233 136.193 1 104.09 ? C6 JW0 601 E 1 
HETATM 9 C C10 JW0 . . . B 2 99.017 145.474 137.158 1 107.13 ? C10 JW0 601 E 1 
HETATM 10 C C11 JW0 . . . B 2 100.64 145.485 138.762 1 107.35 ? C11 JW0 601 E 1 
HETATM 11 C C12 JW0 . . . B 2 101.449 146.569 138.113 1 108.87 ? C12 JW0 601 E 1 
HETATM 12 C C13 JW0 . . . B 2 101.236 146.592 136.596 1 106.91 ? C13 JW0 601 E 1 
HETATM 13 C C14 JW0 . . . B 2 99.756 146.348 136.246 1 105.89 ? C14 JW0 601 E 1 
HETATM 14 C C15 JW0 . . . B 2 101.081 145.611 140.24 1 105.82 ? C15 JW0 601 E 1 
HETATM 15 C C16 JW0 . . . B 2 102.569 146.185 140.041 1 107.05 ? C16 JW0 601 E 1 
HETATM 16 C C17 JW0 . . . B 2 102.795 146.186 138.528 1 107.35 ? C17 JW0 601 E 1 
HETATM 17 C C18 JW0 . . . B 2 103.815 147.254 138.099 1 107.5 ? C18 JW0 601 E 1 
HETATM 18 C C19 JW0 . . . B 2 104.446 147.853 139.343 1 106.23 ? C19 JW0 601 E 1 
HETATM 19 C C20 JW0 . . . B 2 105.779 148.529 139.007 1 105.46 ? C20 JW0 601 E 1 
HETATM 20 C C21 JW0 . . . B 2 104.885 146.578 137.246 1 107.28 ? C21 JW0 601 E 1 
HETATM 21 C C22 JW0 . . . B 2 101 147.833 138.865 1 106.6 ? C22 JW0 601 E 1 
HETATM 22 C C23 JW0 . . . B 2 97.301 146.644 135.717 1 107.49 ? C23 JW0 601 E 1 
HETATM 23 C C24 JW0 . . . B 2 105.786 149.872 139.699 1 105.23 ? C24 JW0 601 E 1 
HETATM 24 C C7 JW0 . . . B 2 97.018 144.929 139.137 1 106.35 ? C7 JW0 601 E 1 
HETATM 25 C C8 JW0 . . . B 2 98.367 145.273 139.621 1 105.75 ? C8 JW0 601 E 1 
HETATM 26 C C9 JW0 . . . B 2 99.247 145.949 138.551 1 107.69 ? C9 JW0 601 E 1 
HETATM 27 O O1 JW0 . . . B 2 101.949 145.541 136.115 1 107.86 ? O1 JW0 601 E 1 
HETATM 28 O O2 JW0 . . . B 2 104.924 150.737 139.388 1 106.9 ? O2 JW0 601 E 1 
HETATM 29 O O4 JW0 . . . B 2 95.13 143.16 137.667 1 108.86 ? O4 JW0 601 E 1 
HETATM 30 O O6 JW0 . . . B 2 93.388 141.264 137.953 1 109.25 -1 O6 JW0 601 E 1 
HETATM 31 O O7 JW0 . . . B 2 95.729 140.667 137.23 1 106.79 ? O7 JW0 601 E 1 
HETATM 32 P P1 JW0 . . . B 2 94.588 141.658 137.128 1 115.09 ? P1 JW0 601 E 1 
#
_model_server_stats.io_time_ms              7 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           310 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           32 
#