data_8KGS # _model_server_result.job_id fbfa-YNj2ezq6S3QRjIlJA _model_server_result.datetime_utc '2024-12-28 14:02:36' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8kgs # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":501}' # _entry.id 8KGS # _exptl.entry_id 8KGS _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 8KGS _cell.length_a 85.077 _cell.length_b 85.077 _cell.length_c 210.18 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8KGS _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 61 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 8_555 x-y,-y,-z 1 0 0 0 -1 0 0 0 -1 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASN 64 A ASN 64 1_555 B MG MG . A MG 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.057 ? metalc ? metalc2 B MG MG . A MG 501 1_555 C O1G ANP . A ANP 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.075 ? metalc ? metalc3 B MG MG . A MG 501 1_555 C O1B ANP . A ANP 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.152 ? metalc ? metalc4 B MG MG . A MG 501 1_555 C O2A ANP . A ANP 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.138 ? metalc ? metalc5 B MG MG . A MG 501 1_555 D O HOH . A HOH 612 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.06 ? metalc ? metalc6 B MG MG . A MG 501 1_555 D O HOH . A HOH 636 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.106 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 8KGS _atom_sites.fract_transf_matrix[1][1] 0.011754 _atom_sites.fract_transf_matrix[1][2] 0.006786 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013572 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004758 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MG A 1 501 1 MG MG . C 3 ANP A 1 502 1 ANP ANP . D 4 HOH A 1 601 83 HOH HOH . D 4 HOH A 2 602 32 HOH HOH . D 4 HOH A 3 603 18 HOH HOH . D 4 HOH A 4 604 106 HOH HOH . D 4 HOH A 5 605 60 HOH HOH . D 4 HOH A 6 606 95 HOH HOH . D 4 HOH A 7 607 81 HOH HOH . D 4 HOH A 8 608 56 HOH HOH . D 4 HOH A 9 609 12 HOH HOH . D 4 HOH A 10 610 75 HOH HOH . D 4 HOH A 11 611 4 HOH HOH . D 4 HOH A 12 612 121 HOH HOH . D 4 HOH A 13 613 54 HOH HOH . D 4 HOH A 14 614 64 HOH HOH . D 4 HOH A 15 615 77 HOH HOH . D 4 HOH A 16 616 63 HOH HOH . D 4 HOH A 17 617 37 HOH HOH . D 4 HOH A 18 618 38 HOH HOH . D 4 HOH A 19 619 35 HOH HOH . D 4 HOH A 20 620 111 HOH HOH . D 4 HOH A 21 621 67 HOH HOH . D 4 HOH A 22 622 36 HOH HOH . D 4 HOH A 23 623 43 HOH HOH . D 4 HOH A 24 624 13 HOH HOH . D 4 HOH A 25 625 1 HOH HOH . D 4 HOH A 26 626 11 HOH HOH . D 4 HOH A 27 627 48 HOH HOH . D 4 HOH A 28 628 34 HOH HOH . D 4 HOH A 29 629 25 HOH HOH . D 4 HOH A 30 630 42 HOH HOH . D 4 HOH A 31 631 108 HOH HOH . D 4 HOH A 32 632 40 HOH HOH . D 4 HOH A 33 633 89 HOH HOH . D 4 HOH A 34 634 72 HOH HOH . D 4 HOH A 35 635 59 HOH HOH . D 4 HOH A 36 636 29 HOH HOH . D 4 HOH A 37 637 20 HOH HOH . D 4 HOH A 38 638 31 HOH HOH . D 4 HOH A 39 639 50 HOH HOH . D 4 HOH A 40 640 5 HOH HOH . D 4 HOH A 41 641 90 HOH HOH . D 4 HOH A 42 642 96 HOH HOH . D 4 HOH A 43 643 23 HOH HOH . D 4 HOH A 44 644 24 HOH HOH . D 4 HOH A 45 645 16 HOH HOH . D 4 HOH A 46 646 79 HOH HOH . D 4 HOH A 47 647 9 HOH HOH . D 4 HOH A 48 648 51 HOH HOH . D 4 HOH A 49 649 14 HOH HOH . D 4 HOH A 50 650 47 HOH HOH . D 4 HOH A 51 651 21 HOH HOH . D 4 HOH A 52 652 7 HOH HOH . D 4 HOH A 53 653 98 HOH HOH . D 4 HOH A 54 654 102 HOH HOH . D 4 HOH A 55 655 107 HOH HOH . D 4 HOH A 56 656 19 HOH HOH . D 4 HOH A 57 657 99 HOH HOH . D 4 HOH A 58 658 39 HOH HOH . D 4 HOH A 59 659 97 HOH HOH . D 4 HOH A 60 660 10 HOH HOH . D 4 HOH A 61 661 17 HOH HOH . D 4 HOH A 62 662 82 HOH HOH . D 4 HOH A 63 663 94 HOH HOH . D 4 HOH A 64 664 66 HOH HOH . D 4 HOH A 65 665 70 HOH HOH . D 4 HOH A 66 666 26 HOH HOH . D 4 HOH A 67 667 68 HOH HOH . D 4 HOH A 68 668 74 HOH HOH . D 4 HOH A 69 669 46 HOH HOH . D 4 HOH A 70 670 8 HOH HOH . D 4 HOH A 71 671 100 HOH HOH . D 4 HOH A 72 672 116 HOH HOH . D 4 HOH A 73 673 6 HOH HOH . D 4 HOH A 74 674 105 HOH HOH . D 4 HOH A 75 675 114 HOH HOH . D 4 HOH A 76 676 27 HOH HOH . D 4 HOH A 77 677 65 HOH HOH . D 4 HOH A 78 678 73 HOH HOH . D 4 HOH A 79 679 76 HOH HOH . D 4 HOH A 80 680 2 HOH HOH . D 4 HOH A 81 681 45 HOH HOH . D 4 HOH A 82 682 103 HOH HOH . D 4 HOH A 83 683 61 HOH HOH . D 4 HOH A 84 684 117 HOH HOH . D 4 HOH A 85 685 55 HOH HOH . D 4 HOH A 86 686 57 HOH HOH . D 4 HOH A 87 687 22 HOH HOH . D 4 HOH A 88 688 33 HOH HOH . D 4 HOH A 89 689 118 HOH HOH . D 4 HOH A 90 690 115 HOH HOH . D 4 HOH A 91 691 112 HOH HOH . D 4 HOH A 92 692 49 HOH HOH . D 4 HOH A 93 693 53 HOH HOH . D 4 HOH A 94 694 120 HOH HOH . D 4 HOH A 95 695 15 HOH HOH . D 4 HOH A 96 696 3 HOH HOH . D 4 HOH A 97 697 28 HOH HOH . D 4 HOH A 98 698 62 HOH HOH . D 4 HOH A 99 699 30 HOH HOH . D 4 HOH A 100 700 52 HOH HOH . D 4 HOH A 101 701 44 HOH HOH . D 4 HOH A 102 702 88 HOH HOH . D 4 HOH A 103 703 58 HOH HOH . D 4 HOH A 104 704 110 HOH HOH . D 4 HOH A 105 705 71 HOH HOH . D 4 HOH A 106 706 41 HOH HOH . D 4 HOH A 107 707 93 HOH HOH . D 4 HOH A 108 708 85 HOH HOH . D 4 HOH A 109 709 78 HOH HOH . D 4 HOH A 110 710 113 HOH HOH . D 4 HOH A 111 711 101 HOH HOH . D 4 HOH A 112 712 109 HOH HOH . D 4 HOH A 113 713 86 HOH HOH . D 4 HOH A 114 714 84 HOH HOH . D 4 HOH A 115 715 69 HOH HOH . D 4 HOH A 116 716 91 HOH HOH . D 4 HOH A 117 717 104 HOH HOH . D 4 HOH A 118 718 80 HOH HOH . D 4 HOH A 119 719 92 HOH HOH . D 4 HOH A 120 720 119 HOH HOH . D 4 HOH A 121 721 87 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id B _atom_site.label_entity_id 2 _atom_site.Cartn_x 23.028 _atom_site.Cartn_y 10.388 _atom_site.Cartn_z -8.421 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 21.38 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 501 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 285 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #