data_8KHG # _model_server_result.job_id 181dTwsYKP60S_686pQf4w _model_server_result.datetime_utc '2024-12-27 02:08:27' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8khg # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":301}' # _entry.id 8KHG # _exptl.entry_id 8KHG _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 192.124 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CITRIC ACID' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8KHG _cell.length_a 46.326 _cell.length_b 103.653 _cell.length_c 109.277 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8KHG _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall 'P 2ac 2ab' _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # _chem_comp.formula 'C6 H8 O7' _chem_comp.formula_weight 192.124 _chem_comp.id CIT _chem_comp.mon_nstd_flag . _chem_comp.name 'CITRIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 CIT doub 70 n n C1 O2 CIT sing 71 n n C1 C2 CIT sing 72 n n O2 HO2 CIT sing 73 n n C2 C3 CIT sing 74 n n C2 H21 CIT sing 75 n n C2 H22 CIT sing 76 n n C3 O7 CIT sing 77 n n C3 C4 CIT sing 78 n n C3 C6 CIT sing 79 n n O7 HO7 CIT sing 80 n n C4 C5 CIT sing 81 n n C4 H41 CIT sing 82 n n C4 H42 CIT sing 83 n n C5 O3 CIT doub 84 n n C5 O4 CIT sing 85 n n O4 HO4 CIT sing 86 n n C6 O5 CIT doub 87 n n C6 O6 CIT sing 88 n n O6 HO6 CIT sing 89 n n # _atom_sites.entry_id 8KHG _atom_sites.fract_transf_matrix[1][1] 0.021586 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009648 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009151 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 CIT A 1 301 301 CIT CIT . D 2 CIT B 1 301 301 CIT CIT . E 3 HOH A 1 401 11 HOH HOH . E 3 HOH A 2 402 1 HOH HOH . E 3 HOH A 3 403 7 HOH HOH . E 3 HOH A 4 404 12 HOH HOH . E 3 HOH A 5 405 6 HOH HOH . E 3 HOH A 6 406 4 HOH HOH . E 3 HOH A 7 407 10 HOH HOH . E 3 HOH A 8 408 13 HOH HOH . F 3 HOH B 1 401 9 HOH HOH . F 3 HOH B 2 402 2 HOH HOH . F 3 HOH B 3 403 5 HOH HOH . F 3 HOH B 4 404 3 HOH HOH . F 3 HOH B 5 405 8 HOH HOH . F 3 HOH B 6 406 14 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 CIT . . . C 2 -13.804 -6.447 6.731 1 40.13 ? C1 CIT 301 A 1 HETATM 2 O O1 CIT . . . C 2 -13.976 -7.135 5.7 1 45.87 ? O1 CIT 301 A 1 HETATM 3 O O2 CIT . . . C 2 -14.813 -6.03 7.363 1 39 ? O2 CIT 301 A 1 HETATM 4 C C2 CIT . . . C 2 -12.382 -6.152 7.184 1 25.76 ? C2 CIT 301 A 1 HETATM 5 C C3 CIT . . . C 2 -11.977 -7.245 8.154 1 27.79 ? C3 CIT 301 A 1 HETATM 6 O O7 CIT . . . C 2 -11.85 -8.502 7.454 1 28.14 ? O7 CIT 301 A 1 HETATM 7 C C4 CIT . . . C 2 -10.651 -6.964 8.852 1 23.17 ? C4 CIT 301 A 1 HETATM 8 C C5 CIT . . . C 2 -10.176 -8.234 9.519 1 31.14 ? C5 CIT 301 A 1 HETATM 9 O O3 CIT . . . C 2 -9.028 -8.662 9.244 1 26.68 ? O3 CIT 301 A 1 HETATM 10 O O4 CIT . . . C 2 -10.908 -8.852 10.356 1 37.78 ? O4 CIT 301 A 1 HETATM 11 C C6 CIT . . . C 2 -13.074 -7.376 9.199 1 28.39 ? C6 CIT 301 A 1 HETATM 12 O O5 CIT . . . C 2 -13.821 -8.387 9.202 1 29.51 ? O5 CIT 301 A 1 HETATM 13 O O6 CIT . . . C 2 -13.246 -6.465 10.037 1 22.62 ? O6 CIT 301 A 1 HETATM 14 H H21 CIT . . . C 2 -12.333 -5.177 7.668 1 30.88 ? H21 CIT 301 A 1 HETATM 15 H H22 CIT . . . C 2 -11.707 -6.135 6.328 1 30.88 ? H22 CIT 301 A 1 HETATM 16 H HO7 CIT . . . C 2 -11.131 -8.435 6.791 1 33.74 ? HO7 CIT 301 A 1 HETATM 17 H H41 CIT . . . C 2 -10.779 -6.177 9.596 1 27.78 ? H41 CIT 301 A 1 HETATM 18 H H42 CIT . . . C 2 -9.912 -6.622 8.128 1 27.78 ? H42 CIT 301 A 1 # _model_server_stats.io_time_ms 43 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 218 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 18 #