data_8KHG
#
_model_server_result.job_id            HdVep3Y99qSRPbGSTvJFDQ 
_model_server_result.datetime_utc      '2024-12-27 02:37:46' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8khg 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":301}' 
#
_entry.id    8KHG 
#
_exptl.entry_id    8KHG 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              192.124 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'CITRIC ACID' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            8KHG 
_cell.length_a            46.326 
_cell.length_b            103.653 
_cell.length_c            109.277 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8KHG 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    'P 2ac 2ab' 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
#
_chem_comp.formula           'C6 H8 O7' 
_chem_comp.formula_weight    192.124 
_chem_comp.id                CIT 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'CITRIC ACID' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 CIT doub 70 n n 
C1 O2 CIT sing 71 n n 
C1 C2 CIT sing 72 n n 
O2 HO2 CIT sing 73 n n 
C2 C3 CIT sing 74 n n 
C2 H21 CIT sing 75 n n 
C2 H22 CIT sing 76 n n 
C3 O7 CIT sing 77 n n 
C3 C4 CIT sing 78 n n 
C3 C6 CIT sing 79 n n 
O7 HO7 CIT sing 80 n n 
C4 C5 CIT sing 81 n n 
C4 H41 CIT sing 82 n n 
C4 H42 CIT sing 83 n n 
C5 O3 CIT doub 84 n n 
C5 O4 CIT sing 85 n n 
O4 HO4 CIT sing 86 n n 
C6 O5 CIT doub 87 n n 
C6 O6 CIT sing 88 n n 
O6 HO6 CIT sing 89 n n 
#
_atom_sites.entry_id                     8KHG 
_atom_sites.fract_transf_matrix[1][1]    0.021586 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.009648 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.009151 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 CIT A 1 301 301 CIT CIT . 
D 2 CIT B 1 301 301 CIT CIT . 
E 3 HOH A 1 401 11 HOH HOH . 
E 3 HOH A 2 402 1 HOH HOH . 
E 3 HOH A 3 403 7 HOH HOH . 
E 3 HOH A 4 404 12 HOH HOH . 
E 3 HOH A 5 405 6 HOH HOH . 
E 3 HOH A 6 406 4 HOH HOH . 
E 3 HOH A 7 407 10 HOH HOH . 
E 3 HOH A 8 408 13 HOH HOH . 
F 3 HOH B 1 401 9 HOH HOH . 
F 3 HOH B 2 402 2 HOH HOH . 
F 3 HOH B 3 403 5 HOH HOH . 
F 3 HOH B 4 404 3 HOH HOH . 
F 3 HOH B 5 405 8 HOH HOH . 
F 3 HOH B 6 406 14 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 CIT . . . D 2 -12.518 16.536 20.74 1 33.77 ? C1 CIT 301 B 1 
HETATM 2 O O1 CIT . . . D 2 -11.418 16.097 20.31 1 37.11 ? O1 CIT 301 B 1 
HETATM 3 O O2 CIT . . . D 2 -12.707 17.767 20.84 1 39.92 ? O2 CIT 301 B 1 
HETATM 4 C C2 CIT . . . D 2 -13.627 15.612 21.169 1 30.64 ? C2 CIT 301 B 1 
HETATM 5 C C3 CIT . . . D 2 -13.521 15.475 22.685 1 34.55 ? C3 CIT 301 B 1 
HETATM 6 O O7 CIT . . . D 2 -13.616 16.776 23.327 1 35.89 ? O7 CIT 301 B 1 
HETATM 7 C C4 CIT . . . D 2 -14.558 14.471 23.188 1 27.92 ? C4 CIT 301 B 1 
HETATM 8 C C5 CIT . . . D 2 -15.022 14.825 24.584 1 31.02 ? C5 CIT 301 B 1 
HETATM 9 O O3 CIT . . . D 2 -14.938 16.003 24.976 1 33.33 ? O3 CIT 301 B 1 
HETATM 10 O O4 CIT . . . D 2 -15.487 13.956 25.361 1 31.37 ? O4 CIT 301 B 1 
HETATM 11 C C6 CIT . . . D 2 -12.148 14.917 22.991 1 28.32 ? C6 CIT 301 B 1 
HETATM 12 O O5 CIT . . . D 2 -11.918 13.726 22.713 1 26.19 ? O5 CIT 301 B 1 
HETATM 13 O O6 CIT . . . D 2 -11.257 15.632 23.49 1 24.16 ? O6 CIT 301 B 1 
HETATM 14 H H21 CIT . . . D 2 -13.523 14.639 20.688 1 36.75 ? H21 CIT 301 B 1 
HETATM 15 H H22 CIT . . . D 2 -14.598 16.021 20.888 1 36.75 ? H22 CIT 301 B 1 
HETATM 16 H HO7 CIT . . . D 2 -14.478 17.187 23.106 1 43.04 ? HO7 CIT 301 B 1 
HETATM 17 H H41 CIT . . . D 2 -14.124 13.471 23.193 1 33.47 ? H41 CIT 301 B 1 
HETATM 18 H H42 CIT . . . D 2 -15.413 14.462 22.513 1 33.47 ? H42 CIT 301 B 1 
#
_model_server_stats.io_time_ms              13 
_model_server_stats.parse_time_ms           24 
_model_server_stats.create_model_time_ms    6 
_model_server_stats.query_time_ms           277 
_model_server_stats.encode_time_ms          10 
_model_server_stats.element_count           18 
#