data_8KIH # _model_server_result.job_id vOpCPzysNQwK4LiFhWnDow _model_server_result.datetime_utc '2024-12-01 06:03:54' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8kih # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":403}' # _entry.id 8KIH # _exptl.entry_id 8KIH _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 3 _entity.src_method nat _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 8KIH _cell.length_a 106.549 _cell.length_b 106.549 _cell.length_c 55.36 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8KIH _symmetry.cell_setting ? _symmetry.Int_Tables_number 172 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 64' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD2 ASP 93 A ASP 93 1_555 D MG MG . A MG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.287 ? metalc ? metalc2 A OD2 ASP 97 A ASP 97 1_555 C MG MG . A MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.306 ? metalc ? metalc3 A OD2 ASP 97 A ASP 97 1_555 D MG MG . A MG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.745 ? metalc ? metalc4 B O03 FGG . A FGG 401 1_555 C MG MG . A MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.681 ? metalc ? metalc5 B O09 FGG . A FGG 401 1_555 C MG MG . A MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.929 ? metalc ? metalc6 B O09 FGG . A FGG 401 1_555 D MG MG . A MG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.413 ? metalc ? metalc7 D MG MG . A MG 403 1_555 E O HOH . A HOH 541 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.791 ? metalc ? metalc8 D MG MG . A MG 403 1_555 E O HOH . A HOH 544 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.226 ? metalc ? metalc9 D MG MG . A MG 403 1_555 E O HOH . A HOH 547 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.543 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 8KIH _atom_sites.fract_transf_matrix[1][1] 0.009385 _atom_sites.fract_transf_matrix[1][2] 0.005419 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010837 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.018063 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 FGG A 1 401 401 FGG FGG . C 3 MG A 1 402 1 MG MG . D 3 MG A 1 403 2 MG MG . E 4 HOH A 1 501 192 HOH HOH . E 4 HOH A 2 502 80 HOH HOH . E 4 HOH A 3 503 203 HOH HOH . E 4 HOH A 4 504 161 HOH HOH . E 4 HOH A 5 505 88 HOH HOH . E 4 HOH A 6 506 62 HOH HOH . E 4 HOH A 7 507 61 HOH HOH . E 4 HOH A 8 508 32 HOH HOH . E 4 HOH A 9 509 50 HOH HOH . E 4 HOH A 10 510 200 HOH HOH . E 4 HOH A 11 511 58 HOH HOH . E 4 HOH A 12 512 137 HOH HOH . E 4 HOH A 13 513 72 HOH HOH . E 4 HOH A 14 514 127 HOH HOH . E 4 HOH A 15 515 36 HOH HOH . E 4 HOH A 16 516 145 HOH HOH . E 4 HOH A 17 517 160 HOH HOH . E 4 HOH A 18 518 48 HOH HOH . E 4 HOH A 19 519 174 HOH HOH . E 4 HOH A 20 520 42 HOH HOH . E 4 HOH A 21 521 121 HOH HOH . E 4 HOH A 22 522 60 HOH HOH . E 4 HOH A 23 523 84 HOH HOH . E 4 HOH A 24 524 149 HOH HOH . E 4 HOH A 25 525 140 HOH HOH . E 4 HOH A 26 526 86 HOH HOH . E 4 HOH A 27 527 97 HOH HOH . E 4 HOH A 28 528 185 HOH HOH . E 4 HOH A 29 529 94 HOH HOH . E 4 HOH A 30 530 89 HOH HOH . E 4 HOH A 31 531 103 HOH HOH . E 4 HOH A 32 532 85 HOH HOH . E 4 HOH A 33 533 106 HOH HOH . E 4 HOH A 34 534 2 HOH HOH . E 4 HOH A 35 535 37 HOH HOH . E 4 HOH A 36 536 31 HOH HOH . E 4 HOH A 37 537 9 HOH HOH . E 4 HOH A 38 538 5 HOH HOH . E 4 HOH A 39 539 178 HOH HOH . E 4 HOH A 40 540 65 HOH HOH . E 4 HOH A 41 541 230 HOH HOH . E 4 HOH A 42 542 126 HOH HOH . E 4 HOH A 43 543 46 HOH HOH . E 4 HOH A 44 544 44 HOH HOH . E 4 HOH A 45 545 217 HOH HOH . E 4 HOH A 46 546 79 HOH HOH . E 4 HOH A 47 547 59 HOH HOH . E 4 HOH A 48 548 163 HOH HOH . E 4 HOH A 49 549 6 HOH HOH . E 4 HOH A 50 550 143 HOH HOH . E 4 HOH A 51 551 10 HOH HOH . E 4 HOH A 52 552 183 HOH HOH . E 4 HOH A 53 553 109 HOH HOH . E 4 HOH A 54 554 13 HOH HOH . E 4 HOH A 55 555 69 HOH HOH . E 4 HOH A 56 556 41 HOH HOH . E 4 HOH A 57 557 209 HOH HOH . E 4 HOH A 58 558 92 HOH HOH . E 4 HOH A 59 559 15 HOH HOH . E 4 HOH A 60 560 102 HOH HOH . E 4 HOH A 61 561 54 HOH HOH . E 4 HOH A 62 562 53 HOH HOH . E 4 HOH A 63 563 22 HOH HOH . E 4 HOH A 64 564 204 HOH HOH . E 4 HOH A 65 565 8 HOH HOH . E 4 HOH A 66 566 16 HOH HOH . E 4 HOH A 67 567 38 HOH HOH . E 4 HOH A 68 568 136 HOH HOH . E 4 HOH A 69 569 206 HOH HOH . E 4 HOH A 70 570 98 HOH HOH . E 4 HOH A 71 571 7 HOH HOH . E 4 HOH A 72 572 214 HOH HOH . E 4 HOH A 73 573 211 HOH HOH . E 4 HOH A 74 574 73 HOH HOH . E 4 HOH A 75 575 29 HOH HOH . E 4 HOH A 76 576 43 HOH HOH . E 4 HOH A 77 577 182 HOH HOH . E 4 HOH A 78 578 229 HOH HOH . E 4 HOH A 79 579 47 HOH HOH . E 4 HOH A 80 580 12 HOH HOH . E 4 HOH A 81 581 188 HOH HOH . E 4 HOH A 82 582 33 HOH HOH . E 4 HOH A 83 583 18 HOH HOH . E 4 HOH A 84 584 66 HOH HOH . E 4 HOH A 85 585 67 HOH HOH . E 4 HOH A 86 586 30 HOH HOH . E 4 HOH A 87 587 125 HOH HOH . E 4 HOH A 88 588 186 HOH HOH . E 4 HOH A 89 589 24 HOH HOH . E 4 HOH A 90 590 20 HOH HOH . E 4 HOH A 91 591 108 HOH HOH . E 4 HOH A 92 592 91 HOH HOH . E 4 HOH A 93 593 187 HOH HOH . E 4 HOH A 94 594 90 HOH HOH . E 4 HOH A 95 595 155 HOH HOH . E 4 HOH A 96 596 130 HOH HOH . E 4 HOH A 97 597 35 HOH HOH . E 4 HOH A 98 598 81 HOH HOH . E 4 HOH A 99 599 1 HOH HOH . E 4 HOH A 100 600 11 HOH HOH . E 4 HOH A 101 601 157 HOH HOH . E 4 HOH A 102 602 77 HOH HOH . E 4 HOH A 103 603 184 HOH HOH . E 4 HOH A 104 604 95 HOH HOH . E 4 HOH A 105 605 171 HOH HOH . E 4 HOH A 106 606 27 HOH HOH . E 4 HOH A 107 607 55 HOH HOH . E 4 HOH A 108 608 14 HOH HOH . E 4 HOH A 109 609 100 HOH HOH . E 4 HOH A 110 610 70 HOH HOH . E 4 HOH A 111 611 166 HOH HOH . E 4 HOH A 112 612 39 HOH HOH . E 4 HOH A 113 613 19 HOH HOH . E 4 HOH A 114 614 222 HOH HOH . E 4 HOH A 115 615 74 HOH HOH . E 4 HOH A 116 616 68 HOH HOH . E 4 HOH A 117 617 45 HOH HOH . E 4 HOH A 118 618 21 HOH HOH . E 4 HOH A 119 619 96 HOH HOH . E 4 HOH A 120 620 176 HOH HOH . E 4 HOH A 121 621 34 HOH HOH . E 4 HOH A 122 622 4 HOH HOH . E 4 HOH A 123 623 194 HOH HOH . E 4 HOH A 124 624 56 HOH HOH . E 4 HOH A 125 625 113 HOH HOH . E 4 HOH A 126 626 115 HOH HOH . E 4 HOH A 127 627 17 HOH HOH . E 4 HOH A 128 628 76 HOH HOH . E 4 HOH A 129 629 25 HOH HOH . E 4 HOH A 130 630 110 HOH HOH . E 4 HOH A 131 631 122 HOH HOH . E 4 HOH A 132 632 199 HOH HOH . E 4 HOH A 133 633 213 HOH HOH . E 4 HOH A 134 634 177 HOH HOH . E 4 HOH A 135 635 153 HOH HOH . E 4 HOH A 136 636 119 HOH HOH . E 4 HOH A 137 637 169 HOH HOH . E 4 HOH A 138 638 208 HOH HOH . E 4 HOH A 139 639 71 HOH HOH . E 4 HOH A 140 640 141 HOH HOH . E 4 HOH A 141 641 64 HOH HOH . E 4 HOH A 142 642 154 HOH HOH . E 4 HOH A 143 643 107 HOH HOH . E 4 HOH A 144 644 225 HOH HOH . E 4 HOH A 145 645 51 HOH HOH . E 4 HOH A 146 646 57 HOH HOH . E 4 HOH A 147 647 87 HOH HOH . E 4 HOH A 148 648 116 HOH HOH . E 4 HOH A 149 649 131 HOH HOH . E 4 HOH A 150 650 202 HOH HOH . E 4 HOH A 151 651 227 HOH HOH . E 4 HOH A 152 652 124 HOH HOH . E 4 HOH A 153 653 3 HOH HOH . E 4 HOH A 154 654 49 HOH HOH . E 4 HOH A 155 655 134 HOH HOH . E 4 HOH A 156 656 193 HOH HOH . E 4 HOH A 157 657 159 HOH HOH . E 4 HOH A 158 658 112 HOH HOH . E 4 HOH A 159 659 223 HOH HOH . E 4 HOH A 160 660 151 HOH HOH . E 4 HOH A 161 661 197 HOH HOH . E 4 HOH A 162 662 207 HOH HOH . E 4 HOH A 163 663 156 HOH HOH . E 4 HOH A 164 664 228 HOH HOH . E 4 HOH A 165 665 63 HOH HOH . E 4 HOH A 166 666 210 HOH HOH . E 4 HOH A 167 667 82 HOH HOH . E 4 HOH A 168 668 189 HOH HOH . E 4 HOH A 169 669 152 HOH HOH . E 4 HOH A 170 670 83 HOH HOH . E 4 HOH A 171 671 114 HOH HOH . E 4 HOH A 172 672 170 HOH HOH . E 4 HOH A 173 673 172 HOH HOH . E 4 HOH A 174 674 135 HOH HOH . E 4 HOH A 175 675 138 HOH HOH . E 4 HOH A 176 676 179 HOH HOH . E 4 HOH A 177 677 104 HOH HOH . E 4 HOH A 178 678 120 HOH HOH . E 4 HOH A 179 679 191 HOH HOH . E 4 HOH A 180 680 133 HOH HOH . E 4 HOH A 181 681 162 HOH HOH . E 4 HOH A 182 682 78 HOH HOH . E 4 HOH A 183 683 111 HOH HOH . E 4 HOH A 184 684 93 HOH HOH . E 4 HOH A 185 685 129 HOH HOH . E 4 HOH A 186 686 175 HOH HOH . E 4 HOH A 187 687 40 HOH HOH . E 4 HOH A 188 688 52 HOH HOH . E 4 HOH A 189 689 164 HOH HOH . E 4 HOH A 190 690 128 HOH HOH . E 4 HOH A 191 691 195 HOH HOH . E 4 HOH A 192 692 215 HOH HOH . E 4 HOH A 193 693 180 HOH HOH . E 4 HOH A 194 694 75 HOH HOH . E 4 HOH A 195 695 101 HOH HOH . E 4 HOH A 196 696 148 HOH HOH . E 4 HOH A 197 697 165 HOH HOH . E 4 HOH A 198 698 224 HOH HOH . E 4 HOH A 199 699 147 HOH HOH . E 4 HOH A 200 700 181 HOH HOH . E 4 HOH A 201 701 201 HOH HOH . E 4 HOH A 202 702 26 HOH HOH . E 4 HOH A 203 703 23 HOH HOH . E 4 HOH A 204 704 144 HOH HOH . E 4 HOH A 205 705 196 HOH HOH . E 4 HOH A 206 706 142 HOH HOH . E 4 HOH A 207 707 132 HOH HOH . E 4 HOH A 208 708 118 HOH HOH . E 4 HOH A 209 709 139 HOH HOH . E 4 HOH A 210 710 123 HOH HOH . E 4 HOH A 211 711 205 HOH HOH . E 4 HOH A 212 712 198 HOH HOH . E 4 HOH A 213 713 105 HOH HOH . E 4 HOH A 214 714 167 HOH HOH . E 4 HOH A 215 715 220 HOH HOH . E 4 HOH A 216 716 158 HOH HOH . E 4 HOH A 217 717 221 HOH HOH . E 4 HOH A 218 718 168 HOH HOH . E 4 HOH A 219 719 117 HOH HOH . E 4 HOH A 220 720 99 HOH HOH . E 4 HOH A 221 721 216 HOH HOH . E 4 HOH A 222 722 146 HOH HOH . E 4 HOH A 223 723 173 HOH HOH . E 4 HOH A 224 724 28 HOH HOH . E 4 HOH A 225 725 150 HOH HOH . E 4 HOH A 226 726 190 HOH HOH . E 4 HOH A 227 727 219 HOH HOH . E 4 HOH A 228 728 212 HOH HOH . E 4 HOH A 229 729 226 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 3 _atom_site.Cartn_x -32.981 _atom_site.Cartn_y -7.492 _atom_site.Cartn_z -2.259 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 32.52 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 403 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 15 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 475 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #