data_8OFI # _model_server_result.job_id UWK77l3K7icMmQWDcI7RLA _model_server_result.datetime_utc '2024-10-13 16:24:32' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8ofi # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":901}' # _entry.id 8OFI # _exptl.entry_id 8OFI _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 468.585 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description Ivabradine _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8OFI _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 8OFI _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C27 H36 N2 O5' _chem_comp.formula_weight 468.585 _chem_comp.id VNZ _chem_comp.mon_nstd_flag . _chem_comp.name Ivabradine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 3-[3-[[(7S)-3,4-dimethoxy-7-bicyclo[4.2.0]octa-1,3,5-trienyl]methyl-methyl-amino]propyl]-7,8-dimethoxy-2,5-dihydro-1H-3-benzazepin-4-one;3-[3-[[(7S)-3,4-dimethoxy-7-bicyclo[4.2.0]octa-1(6),2,4-trienyl]methyl-methyl-amino]propyl]-7,8-dimethoxy-2,5-dihydro-1H-3-benzazepin-4-one # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C13 C14 VNZ sing 374 n n C13 C12 VNZ sing 375 n n C15 C14 VNZ sing 376 n y C15 C16 VNZ doub 377 n y C14 C21 VNZ doub 378 n y C11 C12 VNZ sing 379 n n C11 N1 VNZ sing 380 n n C16 O2 VNZ sing 381 n n C16 C18 VNZ sing 382 n y C21 C20 VNZ sing 383 n y C21 C12 VNZ sing 384 n n O2 C17 VNZ sing 385 n n C18 C20 VNZ doub 386 n y C18 O3 VNZ sing 387 n n O3 C19 VNZ sing 388 n n N1 C9 VNZ sing 389 n n N1 C10 VNZ sing 390 n n C9 C8 VNZ sing 391 n n C7 C8 VNZ sing 392 n n C7 N VNZ sing 393 n n O1 C6 VNZ doub 394 n n C6 N VNZ sing 395 n n C6 C5 VNZ sing 396 n n N C22 VNZ sing 397 n n C5 C4 VNZ sing 398 n n C22 C23 VNZ sing 399 n n C23 C3 VNZ sing 400 n n C4 C3 VNZ doub 401 n y C4 C24 VNZ sing 402 n y C3 C2 VNZ sing 403 n y C24 C25 VNZ doub 404 n y C2 C1 VNZ doub 405 n y C25 C1 VNZ sing 406 n y C25 O4 VNZ sing 407 n n C26 O4 VNZ sing 408 n n C1 O VNZ sing 409 n n O C VNZ sing 410 n n C5 H1 VNZ sing 411 n n C5 H2 VNZ sing 412 n n C24 H3 VNZ sing 413 n n C26 H4 VNZ sing 414 n n C26 H5 VNZ sing 415 n n C26 H6 VNZ sing 416 n n C H7 VNZ sing 417 n n C H8 VNZ sing 418 n n C H9 VNZ sing 419 n n C22 H10 VNZ sing 420 n n C22 H11 VNZ sing 421 n n C23 H12 VNZ sing 422 n n C23 H13 VNZ sing 423 n n C2 H14 VNZ sing 424 n n C7 H15 VNZ sing 425 n n C7 H16 VNZ sing 426 n n C8 H17 VNZ sing 427 n n C8 H18 VNZ sing 428 n n C9 H19 VNZ sing 429 n n C9 H20 VNZ sing 430 n n C10 H22 VNZ sing 431 n n C10 H23 VNZ sing 432 n n C10 H24 VNZ sing 433 n n C11 H25 VNZ sing 434 n n C11 H26 VNZ sing 435 n n C12 H27 VNZ sing 436 n n C13 H28 VNZ sing 437 n n C13 H29 VNZ sing 438 n n C20 H30 VNZ sing 439 n n C19 H31 VNZ sing 440 n n C19 H32 VNZ sing 441 n n C19 H33 VNZ sing 442 n n C15 H34 VNZ sing 443 n n C17 H35 VNZ sing 444 n n C17 H36 VNZ sing 445 n n C17 H37 VNZ sing 446 n n # _atom_sites.entry_id 8OFI _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # _pdbx_nonpoly_scheme.asym_id E _pdbx_nonpoly_scheme.entity_id 2 _pdbx_nonpoly_scheme.mon_id VNZ _pdbx_nonpoly_scheme.pdb_strand_id C _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 901 _pdbx_nonpoly_scheme.auth_seq_num 801 _pdbx_nonpoly_scheme.pdb_mon_id VNZ _pdbx_nonpoly_scheme.auth_mon_id IVR _pdbx_nonpoly_scheme.pdb_ins_code . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 VNZ . A . E 2 171.463 167.674 157.959 0.5 22.52 ? O1 VNZ 901 C 1 HETATM 2 O O1 VNZ . B . E 2 172.872 170.531 154.347 0.5 22.52 ? O1 VNZ 901 C 1 HETATM 3 C C6 VNZ . A . E 2 171.467 168.61 157.199 0.5 22.52 ? C6 VNZ 901 C 1 HETATM 4 C C6 VNZ . B . E 2 171.879 170.061 154.873 0.5 22.52 ? C6 VNZ 901 C 1 HETATM 5 C C5 VNZ . A . E 2 171.025 169.967 157.664 0.5 22.52 ? C5 VNZ 901 C 1 HETATM 6 C C5 VNZ . B . E 2 170.613 170.883 154.959 0.5 22.52 ? C5 VNZ 901 C 1 HETATM 7 C C4 VNZ . A . E 2 170.374 170.402 156.382 0.5 22.52 ? C4 VNZ 901 C 1 HETATM 8 C C4 VNZ . B . E 2 169.478 170.338 155.787 0.5 22.52 ? C4 VNZ 901 C 1 HETATM 9 C C24 VNZ . A . E 2 168.992 170.494 156.387 0.5 22.52 ? C24 VNZ 901 C 1 HETATM 10 C C24 VNZ . B . E 2 168.181 170.453 155.295 0.5 22.52 ? C24 VNZ 901 C 1 HETATM 11 C C25 VNZ . A . E 2 168.313 170.75 155.236 0.5 22.52 ? C25 VNZ 901 C 1 HETATM 12 C C25 VNZ . B . E 2 167.115 169.893 155.962 0.5 22.52 ? C25 VNZ 901 C 1 HETATM 13 O O4 VNZ . A . E 2 166.985 170.491 155.097 0.5 22.52 ? O4 VNZ 901 C 1 HETATM 14 O O4 VNZ . B . E 2 165.825 169.901 155.516 0.5 22.52 ? O4 VNZ 901 C 1 HETATM 15 C C26 VNZ . A . E 2 166.412 169.581 156.031 0.5 22.52 ? C26 VNZ 901 C 1 HETATM 16 C C26 VNZ . B . E 2 165.592 170.367 154.189 0.5 22.52 ? C26 VNZ 901 C 1 HETATM 17 C C1 VNZ . A . E 2 169.024 171.032 154.057 0.5 22.52 ? C1 VNZ 901 C 1 HETATM 18 C C1 VNZ . B . E 2 167.332 169.228 157.172 0.5 22.52 ? C1 VNZ 901 C 1 HETATM 19 O O VNZ . A . E 2 168.34 171.578 153.024 0.5 22.52 ? O VNZ 901 C 1 HETATM 20 O O VNZ . B . E 2 166.239 168.634 157.731 0.5 22.52 ? O VNZ 901 C 1 HETATM 21 C C VNZ . A . E 2 169.134 172.19 152.049 0.5 22.52 ? C VNZ 901 C 1 HETATM 22 C C VNZ . B . E 2 166.252 168.444 159.144 0.5 22.52 ? C VNZ 901 C 1 HETATM 23 N N VNZ . A . E 2 171.824 168.486 155.915 0.5 22.52 ? N VNZ 901 C 1 HETATM 24 N N VNZ . B . E 2 171.897 168.831 155.413 0.5 22.52 ? N VNZ 901 C 1 HETATM 25 C C22 VNZ . A . E 2 172.972 169.187 155.359 0.5 22.52 ? C22 VNZ 901 C 1 HETATM 26 C C22 VNZ . B . E 2 171.966 168.607 156.86 0.5 22.52 ? C22 VNZ 901 C 1 HETATM 27 C C23 VNZ . A . E 2 172.572 170.59 154.995 0.5 22.52 ? C23 VNZ 901 C 1 HETATM 28 C C23 VNZ . B . E 2 171.047 169.533 157.64 0.5 22.52 ? C23 VNZ 901 C 1 HETATM 29 C C3 VNZ . A . E 2 171.079 170.614 155.184 0.5 22.52 ? C3 VNZ 901 C 1 HETATM 30 C C3 VNZ . B . E 2 169.689 169.69 157.01 0.5 22.52 ? C3 VNZ 901 C 1 HETATM 31 C C2 VNZ . A . E 2 170.379 170.926 154.038 0.5 22.52 ? C2 VNZ 901 C 1 HETATM 32 C C2 VNZ . B . E 2 168.602 169.156 157.689 0.5 22.52 ? C2 VNZ 901 C 1 HETATM 33 C C7 VNZ . A . E 2 171.199 167.477 155.076 0.5 22.52 ? C7 VNZ 901 C 1 HETATM 34 C C7 VNZ . B . E 2 172.005 167.671 154.529 0.5 22.52 ? C7 VNZ 901 C 1 HETATM 35 C C8 VNZ . A . E 2 171.935 167.309 153.784 0.5 22.52 ? C8 VNZ 901 C 1 HETATM 36 C C8 VNZ . B . E 2 172.679 168.037 153.219 0.5 22.52 ? C8 VNZ 901 C 1 HETATM 37 C C9 VNZ . A . E 2 171.346 166.159 153.03 0.5 22.52 ? C9 VNZ 901 C 1 HETATM 38 C C9 VNZ . B . E 2 173.301 166.917 152.413 0.5 22.52 ? C9 VNZ 901 C 1 HETATM 39 N N1 VNZ . A . E 2 171.127 166.462 151.63 0.5 22.52 ? N1 VNZ 901 C 1 HETATM 40 N N1 VNZ . B . E 2 172.336 166.167 151.612 0.5 22.52 ? N1 VNZ 901 C 1 HETATM 41 C C10 VNZ . A . E 2 172.151 165.76 150.899 0.5 22.52 ? C10 VNZ 901 C 1 HETATM 42 C C10 VNZ . B . E 2 172.722 164.771 151.46 0.5 22.52 ? C10 VNZ 901 C 1 HETATM 43 C C11 VNZ . A . E 2 171.07 167.902 151.379 0.5 22.52 ? C11 VNZ 901 C 1 HETATM 44 C C11 VNZ . B . E 2 170.927 166.382 151.923 0.5 22.52 ? C11 VNZ 901 C 1 HETATM 45 C C12 VNZ . A . E 2 170.012 168.312 150.353 0.5 22.52 ? C12 VNZ 901 C 1 HETATM 46 C C12 VNZ . B . E 2 170.29 165.226 152.696 0.5 22.52 ? C12 VNZ 901 C 1 HETATM 47 C C21 VNZ . A . E 2 168.616 168.605 150.863 0.5 22.52 ? C21 VNZ 901 C 1 HETATM 48 C C21 VNZ . B . E 2 169.297 165.649 153.765 0.5 22.52 ? C21 VNZ 901 C 1 HETATM 49 C C14 VNZ . A . E 2 168.339 167.322 150.988 0.5 22.52 ? C14 VNZ 901 C 1 HETATM 50 C C14 VNZ . B . E 2 170.048 165.199 154.792 0.5 22.52 ? C14 VNZ 901 C 1 HETATM 51 C C13 VNZ . A . E 2 169.263 167.061 149.827 0.5 22.52 ? C13 VNZ 901 C 1 HETATM 52 C C13 VNZ . B . E 2 171.107 164.609 153.886 0.5 22.52 ? C13 VNZ 901 C 1 HETATM 53 C C20 VNZ . A . E 2 167.787 169.597 151.343 0.5 22.52 ? C20 VNZ 901 C 1 HETATM 54 C C20 VNZ . B . E 2 168.078 166.277 153.955 0.5 22.52 ? C20 VNZ 901 C 1 HETATM 55 C C18 VNZ . A . E 2 166.674 169.185 152.057 0.5 22.52 ? C18 VNZ 901 C 1 HETATM 56 C C18 VNZ . B . E 2 167.648 166.448 155.259 0.5 22.52 ? C18 VNZ 901 C 1 HETATM 57 O O3 VNZ . A . E 2 165.644 170.009 152.409 0.5 22.52 ? O3 VNZ 901 C 1 HETATM 58 O O3 VNZ . B . E 2 166.476 167.057 155.595 0.5 22.52 ? O3 VNZ 901 C 1 HETATM 59 C C19 VNZ . A . E 2 165.498 171.207 151.665 0.5 22.52 ? C19 VNZ 901 C 1 HETATM 60 C C19 VNZ . B . E 2 165.506 167.196 154.565 0.5 22.52 ? C19 VNZ 901 C 1 HETATM 61 C C16 VNZ . A . E 2 166.473 167.811 152.336 0.5 22.52 ? C16 VNZ 901 C 1 HETATM 62 C C16 VNZ . B . E 2 168.44 165.985 156.344 0.5 22.52 ? C16 VNZ 901 C 1 HETATM 63 C C15 VNZ . A . E 2 167.291 166.86 151.759 0.5 22.52 ? C15 VNZ 901 C 1 HETATM 64 C C15 VNZ . B . E 2 169.646 165.356 156.106 0.5 22.52 ? C15 VNZ 901 C 1 HETATM 65 O O2 VNZ . A . E 2 165.567 167.547 153.32 0.5 22.52 ? O2 VNZ 901 C 1 HETATM 66 O O2 VNZ . B . E 2 167.932 166.218 157.588 0.5 22.52 ? O2 VNZ 901 C 1 HETATM 67 C C17 VNZ . A . E 2 166.082 167.039 154.545 0.5 22.52 ? C17 VNZ 901 C 1 HETATM 68 C C17 VNZ . B . E 2 168.709 165.784 158.701 0.5 22.52 ? C17 VNZ 901 C 1 # _model_server_stats.io_time_ms 124 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 27 _model_server_stats.query_time_ms 264 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 68 #