data_8OFX # _model_server_result.job_id WO145BZ-FOa42WyeLhN7bg _model_server_result.datetime_utc '2024-12-21 17:53:12' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8ofx # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":401}' # _entry.id 8OFX # _exptl.entry_id 8OFX _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 398.339 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '[(2~{R},4~{S})-2-[4-[[4,6-bis(azanyl)-1,3,5-triazin-2-yl]amino]phenyl]-1,3,2-dithiarsolan-4-yl]methanol' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8OFX _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 8OFX _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B 1 1 A,B 1 2 A,B 1 3 A,B 1 4 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 ? 1 0 0 0 1 0 0 0 1 0 0 0 2 'point symmetry operation' ? ? 0 -1 0 1 0 0 0 0 1 333.44 0 0 3 'point symmetry operation' ? ? -1 0 0 0 -1 0 0 0 1 333.44 333.44 0 4 'point symmetry operation' ? ? 0 1 0 -1 0 0 0 0 1 0 333.44 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C12 H15 As N6 O S2' _chem_comp.formula_weight 398.339 _chem_comp.id VO6 _chem_comp.mon_nstd_flag . _chem_comp.name '[(2~{R},4~{S})-2-[4-[[4,6-bis(azanyl)-1,3,5-triazin-2-yl]amino]phenyl]-1,3,2-dithiarsolan-4-yl]methanol' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C12 VO6 sing 374 n n C12 C2 VO6 sing 375 n n C2 C1 VO6 sing 376 n n C2 S1 VO6 sing 377 n n C1 S2 VO6 sing 378 n n S1 AS VO6 sing 379 n n S2 AS VO6 sing 380 n n AS C3 VO6 sing 381 n n C3 C4 VO6 doub 382 n y C3 C8 VO6 sing 383 n y C4 C5 VO6 sing 384 n y C8 C7 VO6 doub 385 n y C5 C6 VO6 doub 386 n y C7 C6 VO6 sing 387 n y C6 N1 VO6 sing 388 n n N1 C9 VO6 sing 389 n n N2 C9 VO6 doub 390 n y N2 C10 VO6 sing 391 n y C9 N4 VO6 sing 392 n y C10 N6 VO6 sing 393 n n C10 N3 VO6 doub 394 n y N4 C11 VO6 doub 395 n y C11 N3 VO6 sing 396 n y C11 N5 VO6 sing 397 n n C8 H1 VO6 sing 398 n n C5 H2 VO6 sing 399 n n N6 H3 VO6 sing 400 n n N6 H4 VO6 sing 401 n n N1 H5 VO6 sing 402 n n C2 H6 VO6 sing 403 n n C4 H7 VO6 sing 404 n n O1 H8 VO6 sing 405 n n C1 H9 VO6 sing 406 n n C1 H10 VO6 sing 407 n n C7 H11 VO6 sing 408 n n N5 H12 VO6 sing 409 n n N5 H13 VO6 sing 410 n n C12 H14 VO6 sing 411 n n C12 H15 VO6 sing 412 n n # _atom_sites.entry_id 8OFX _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # _pdbx_nonpoly_scheme.asym_id B _pdbx_nonpoly_scheme.entity_id 2 _pdbx_nonpoly_scheme.mon_id VO6 _pdbx_nonpoly_scheme.pdb_strand_id A _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 401 _pdbx_nonpoly_scheme.auth_seq_num 401 _pdbx_nonpoly_scheme.pdb_mon_id VO6 _pdbx_nonpoly_scheme.auth_mon_id MSP _pdbx_nonpoly_scheme.pdb_ins_code . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N2 VO6 . . . B 2 164.837 185.299 164.429 1 178 ? N2 VO6 401 A 1 HETATM 2 C C9 VO6 . . . B 2 166.097 184.793 164.454 1 163.93 ? C9 VO6 401 A 1 HETATM 3 S S1 VO6 . . . B 2 167.582 184.052 155.285 1 171.32 ? S1 VO6 401 A 1 HETATM 4 C C8 VO6 . . . B 2 165.188 184.783 159.839 1 153.65 ? C8 VO6 401 A 1 HETATM 5 C C5 VO6 . . . B 2 167.618 184.525 161.194 1 178.9 ? C5 VO6 401 A 1 HETATM 6 C C6 VO6 . . . B 2 166.422 184.476 161.929 1 165.72 ? C6 VO6 401 A 1 HETATM 7 N N6 VO6 . . . B 2 163.094 186.287 165.617 1 239.62 ? N6 VO6 401 A 1 HETATM 8 N N1 VO6 . . . B 2 166.611 184.221 163.321 1 139.33 ? N1 VO6 401 A 1 HETATM 9 C C2 VO6 . . . B 2 166.74 185.169 153.948 1 168.29 ? C2 VO6 401 A 1 HETATM 10 N N3 VO6 . . . B 2 164.973 185.767 166.792 1 159.76 ? N3 VO6 401 A 1 HETATM 11 C C4 VO6 . . . B 2 167.613 184.728 159.821 1 144.49 ? C4 VO6 401 A 1 HETATM 12 O O1 VO6 . . . B 2 165.554 184.729 151.853 1 168.18 ? O1 VO6 401 A 1 HETATM 13 C C1 VO6 . . . B 2 165.296 185.582 154.325 1 137.46 ? C1 VO6 401 A 1 HETATM 14 AS AS VO6 . . . B 2 167.04 185.278 157.199 1 159.65 ? AS VO6 401 A 1 HETATM 15 S S2 VO6 . . . B 2 164.965 185.6 156.146 1 184.16 ? S2 VO6 401 A 1 HETATM 16 C C3 VO6 . . . B 2 166.402 184.859 159.133 1 180.52 ? C3 VO6 401 A 1 HETATM 17 C C7 VO6 . . . B 2 165.205 184.591 161.231 1 157.79 ? C7 VO6 401 A 1 HETATM 18 C C10 VO6 . . . B 2 164.325 185.761 165.61 1 208.36 ? C10 VO6 401 A 1 HETATM 19 C C11 VO6 . . . B 2 166.214 185.226 166.733 1 227.02 ? C11 VO6 401 A 1 HETATM 20 N N4 VO6 . . . B 2 166.817 184.725 165.61 1 167.59 ? N4 VO6 401 A 1 HETATM 21 N N5 VO6 . . . B 2 166.894 185.193 167.888 1 209.72 ? N5 VO6 401 A 1 HETATM 22 C C12 VO6 . . . B 2 166.775 184.511 152.575 1 185.58 ? C12 VO6 401 A 1 # _model_server_stats.io_time_ms 37 _model_server_stats.parse_time_ms 15 _model_server_stats.create_model_time_ms 12 _model_server_stats.query_time_ms 280 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 22 #