data_8OG5
#
_model_server_result.job_id            OxPVLHWtELCQgMmYETqqUA 
_model_server_result.datetime_utc      '2024-11-16 06:49:35' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8og5 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":1501}' 
#
_entry.id    8OG5 
#
_exptl.entry_id    8OG5 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              62.068 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-ETHANEDIOL 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            8OG5 
_cell.length_a            81.924 
_cell.length_b            81.924 
_cell.length_c            236.778 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8OG5 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        178 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 61 2 2' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C2 H6 O2' 
_chem_comp.formula_weight    62.068 
_chem_comp.id                EDO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,2-ETHANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'ETHYLENE GLYCOL' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 EDO sing 89 n n 
C1 C2 EDO sing 90 n n 
C1 H11 EDO sing 91 n n 
C1 H12 EDO sing 92 n n 
O1 HO1 EDO sing 93 n n 
C2 O2 EDO sing 94 n n 
C2 H21 EDO sing 95 n n 
C2 H22 EDO sing 96 n n 
O2 HO2 EDO sing 97 n n 
#
_atom_sites.entry_id                     8OG5 
_atom_sites.fract_transf_matrix[1][1]    0.012206 
_atom_sites.fract_transf_matrix[1][2]    0.007047 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.014095 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.004223 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 EDO A 1 1501 1 EDO EDO . 
C 3 ACT A 1 1502 2 ACT ACT . 
D 4 LQH A 1 1503 1 LQH LI1 . 
E 4 LQH A 1 1504 2 LQH LI1 . 
F 4 LQH A 1 1505 3 LQH LI1 . 
G 5 HOH A 1 1601 287 HOH HOH . 
G 5 HOH A 2 1602 300 HOH HOH . 
G 5 HOH A 3 1603 4 HOH HOH . 
G 5 HOH A 4 1604 122 HOH HOH . 
G 5 HOH A 5 1605 31 HOH HOH . 
G 5 HOH A 6 1606 28 HOH HOH . 
G 5 HOH A 7 1607 250 HOH HOH . 
G 5 HOH A 8 1608 218 HOH HOH . 
G 5 HOH A 9 1609 62 HOH HOH . 
G 5 HOH A 10 1610 40 HOH HOH . 
G 5 HOH A 11 1611 291 HOH HOH . 
G 5 HOH A 12 1612 149 HOH HOH . 
G 5 HOH A 13 1613 249 HOH HOH . 
G 5 HOH A 14 1614 296 HOH HOH . 
G 5 HOH A 15 1615 278 HOH HOH . 
G 5 HOH A 16 1616 293 HOH HOH . 
G 5 HOH A 17 1617 116 HOH HOH . 
G 5 HOH A 18 1618 7 HOH HOH . 
G 5 HOH A 19 1619 282 HOH HOH . 
G 5 HOH A 20 1620 147 HOH HOH . 
G 5 HOH A 21 1621 181 HOH HOH . 
G 5 HOH A 22 1622 221 HOH HOH . 
G 5 HOH A 23 1623 33 HOH HOH . 
G 5 HOH A 24 1624 202 HOH HOH . 
G 5 HOH A 25 1625 21 HOH HOH . 
G 5 HOH A 26 1626 18 HOH HOH . 
G 5 HOH A 27 1627 230 HOH HOH . 
G 5 HOH A 28 1628 30 HOH HOH . 
G 5 HOH A 29 1629 214 HOH HOH . 
G 5 HOH A 30 1630 268 HOH HOH . 
G 5 HOH A 31 1631 210 HOH HOH . 
G 5 HOH A 32 1632 1 HOH HOH . 
G 5 HOH A 33 1633 66 HOH HOH . 
G 5 HOH A 34 1634 12 HOH HOH . 
G 5 HOH A 35 1635 153 HOH HOH . 
G 5 HOH A 36 1636 276 HOH HOH . 
G 5 HOH A 37 1637 9 HOH HOH . 
G 5 HOH A 38 1638 130 HOH HOH . 
G 5 HOH A 39 1639 11 HOH HOH . 
G 5 HOH A 40 1640 215 HOH HOH . 
G 5 HOH A 41 1641 51 HOH HOH . 
G 5 HOH A 42 1642 8 HOH HOH . 
G 5 HOH A 43 1643 236 HOH HOH . 
G 5 HOH A 44 1644 301 HOH HOH . 
G 5 HOH A 45 1645 23 HOH HOH . 
G 5 HOH A 46 1646 64 HOH HOH . 
G 5 HOH A 47 1647 96 HOH HOH . 
G 5 HOH A 48 1648 137 HOH HOH . 
G 5 HOH A 49 1649 212 HOH HOH . 
G 5 HOH A 50 1650 302 HOH HOH . 
G 5 HOH A 51 1651 164 HOH HOH . 
G 5 HOH A 52 1652 5 HOH HOH . 
G 5 HOH A 53 1653 39 HOH HOH . 
G 5 HOH A 54 1654 127 HOH HOH . 
G 5 HOH A 55 1655 125 HOH HOH . 
G 5 HOH A 56 1656 72 HOH HOH . 
G 5 HOH A 57 1657 86 HOH HOH . 
G 5 HOH A 58 1658 61 HOH HOH . 
G 5 HOH A 59 1659 131 HOH HOH . 
G 5 HOH A 60 1660 14 HOH HOH . 
G 5 HOH A 61 1661 126 HOH HOH . 
G 5 HOH A 62 1662 299 HOH HOH . 
G 5 HOH A 63 1663 2 HOH HOH . 
G 5 HOH A 64 1664 3 HOH HOH . 
G 5 HOH A 65 1665 24 HOH HOH . 
G 5 HOH A 66 1666 32 HOH HOH . 
G 5 HOH A 67 1667 102 HOH HOH . 
G 5 HOH A 68 1668 26 HOH HOH . 
G 5 HOH A 69 1669 49 HOH HOH . 
G 5 HOH A 70 1670 15 HOH HOH . 
G 5 HOH A 71 1671 195 HOH HOH . 
G 5 HOH A 72 1672 17 HOH HOH . 
G 5 HOH A 73 1673 260 HOH HOH . 
G 5 HOH A 74 1674 45 HOH HOH . 
G 5 HOH A 75 1675 94 HOH HOH . 
G 5 HOH A 76 1676 71 HOH HOH . 
G 5 HOH A 77 1677 53 HOH HOH . 
G 5 HOH A 78 1678 234 HOH HOH . 
G 5 HOH A 79 1679 108 HOH HOH . 
G 5 HOH A 80 1680 139 HOH HOH . 
G 5 HOH A 81 1681 29 HOH HOH . 
G 5 HOH A 82 1682 123 HOH HOH . 
G 5 HOH A 83 1683 162 HOH HOH . 
G 5 HOH A 84 1684 78 HOH HOH . 
G 5 HOH A 85 1685 175 HOH HOH . 
G 5 HOH A 86 1686 264 HOH HOH . 
G 5 HOH A 87 1687 67 HOH HOH . 
G 5 HOH A 88 1688 63 HOH HOH . 
G 5 HOH A 89 1689 104 HOH HOH . 
G 5 HOH A 90 1690 185 HOH HOH . 
G 5 HOH A 91 1691 97 HOH HOH . 
G 5 HOH A 92 1692 27 HOH HOH . 
G 5 HOH A 93 1693 22 HOH HOH . 
G 5 HOH A 94 1694 13 HOH HOH . 
G 5 HOH A 95 1695 167 HOH HOH . 
G 5 HOH A 96 1696 57 HOH HOH . 
G 5 HOH A 97 1697 294 HOH HOH . 
G 5 HOH A 98 1698 34 HOH HOH . 
G 5 HOH A 99 1699 182 HOH HOH . 
G 5 HOH A 100 1700 16 HOH HOH . 
G 5 HOH A 101 1701 25 HOH HOH . 
G 5 HOH A 102 1702 59 HOH HOH . 
G 5 HOH A 103 1703 54 HOH HOH . 
G 5 HOH A 104 1704 176 HOH HOH . 
G 5 HOH A 105 1705 142 HOH HOH . 
G 5 HOH A 106 1706 274 HOH HOH . 
G 5 HOH A 107 1707 69 HOH HOH . 
G 5 HOH A 108 1708 286 HOH HOH . 
G 5 HOH A 109 1709 6 HOH HOH . 
G 5 HOH A 110 1710 200 HOH HOH . 
G 5 HOH A 111 1711 204 HOH HOH . 
G 5 HOH A 112 1712 68 HOH HOH . 
G 5 HOH A 113 1713 154 HOH HOH . 
G 5 HOH A 114 1714 84 HOH HOH . 
G 5 HOH A 115 1715 109 HOH HOH . 
G 5 HOH A 116 1716 47 HOH HOH . 
G 5 HOH A 117 1717 44 HOH HOH . 
G 5 HOH A 118 1718 283 HOH HOH . 
G 5 HOH A 119 1719 106 HOH HOH . 
G 5 HOH A 120 1720 156 HOH HOH . 
G 5 HOH A 121 1721 152 HOH HOH . 
G 5 HOH A 122 1722 43 HOH HOH . 
G 5 HOH A 123 1723 188 HOH HOH . 
G 5 HOH A 124 1724 132 HOH HOH . 
G 5 HOH A 125 1725 277 HOH HOH . 
G 5 HOH A 126 1726 48 HOH HOH . 
G 5 HOH A 127 1727 36 HOH HOH . 
G 5 HOH A 128 1728 133 HOH HOH . 
G 5 HOH A 129 1729 77 HOH HOH . 
G 5 HOH A 130 1730 37 HOH HOH . 
G 5 HOH A 131 1731 46 HOH HOH . 
G 5 HOH A 132 1732 222 HOH HOH . 
G 5 HOH A 133 1733 119 HOH HOH . 
G 5 HOH A 134 1734 103 HOH HOH . 
G 5 HOH A 135 1735 105 HOH HOH . 
G 5 HOH A 136 1736 146 HOH HOH . 
G 5 HOH A 137 1737 50 HOH HOH . 
G 5 HOH A 138 1738 138 HOH HOH . 
G 5 HOH A 139 1739 231 HOH HOH . 
G 5 HOH A 140 1740 295 HOH HOH . 
G 5 HOH A 141 1741 87 HOH HOH . 
G 5 HOH A 142 1742 83 HOH HOH . 
G 5 HOH A 143 1743 90 HOH HOH . 
G 5 HOH A 144 1744 65 HOH HOH . 
G 5 HOH A 145 1745 60 HOH HOH . 
G 5 HOH A 146 1746 226 HOH HOH . 
G 5 HOH A 147 1747 172 HOH HOH . 
G 5 HOH A 148 1748 10 HOH HOH . 
G 5 HOH A 149 1749 120 HOH HOH . 
G 5 HOH A 150 1750 168 HOH HOH . 
G 5 HOH A 151 1751 273 HOH HOH . 
G 5 HOH A 152 1752 284 HOH HOH . 
G 5 HOH A 153 1753 279 HOH HOH . 
G 5 HOH A 154 1754 95 HOH HOH . 
G 5 HOH A 155 1755 42 HOH HOH . 
G 5 HOH A 156 1756 101 HOH HOH . 
G 5 HOH A 157 1757 91 HOH HOH . 
G 5 HOH A 158 1758 281 HOH HOH . 
G 5 HOH A 159 1759 201 HOH HOH . 
G 5 HOH A 160 1760 235 HOH HOH . 
G 5 HOH A 161 1761 100 HOH HOH . 
G 5 HOH A 162 1762 92 HOH HOH . 
G 5 HOH A 163 1763 135 HOH HOH . 
G 5 HOH A 164 1764 35 HOH HOH . 
G 5 HOH A 165 1765 160 HOH HOH . 
G 5 HOH A 166 1766 258 HOH HOH . 
G 5 HOH A 167 1767 198 HOH HOH . 
G 5 HOH A 168 1768 136 HOH HOH . 
G 5 HOH A 169 1769 174 HOH HOH . 
G 5 HOH A 170 1770 148 HOH HOH . 
G 5 HOH A 171 1771 192 HOH HOH . 
G 5 HOH A 172 1772 255 HOH HOH . 
G 5 HOH A 173 1773 178 HOH HOH . 
G 5 HOH A 174 1774 159 HOH HOH . 
G 5 HOH A 175 1775 263 HOH HOH . 
G 5 HOH A 176 1776 74 HOH HOH . 
G 5 HOH A 177 1777 93 HOH HOH . 
G 5 HOH A 178 1778 238 HOH HOH . 
G 5 HOH A 179 1779 262 HOH HOH . 
G 5 HOH A 180 1780 99 HOH HOH . 
G 5 HOH A 181 1781 118 HOH HOH . 
G 5 HOH A 182 1782 196 HOH HOH . 
G 5 HOH A 183 1783 183 HOH HOH . 
G 5 HOH A 184 1784 144 HOH HOH . 
G 5 HOH A 185 1785 58 HOH HOH . 
G 5 HOH A 186 1786 117 HOH HOH . 
G 5 HOH A 187 1787 289 HOH HOH . 
G 5 HOH A 188 1788 161 HOH HOH . 
G 5 HOH A 189 1789 298 HOH HOH . 
G 5 HOH A 190 1790 19 HOH HOH . 
G 5 HOH A 191 1791 158 HOH HOH . 
G 5 HOH A 192 1792 155 HOH HOH . 
G 5 HOH A 193 1793 73 HOH HOH . 
G 5 HOH A 194 1794 206 HOH HOH . 
G 5 HOH A 195 1795 70 HOH HOH . 
G 5 HOH A 196 1796 259 HOH HOH . 
G 5 HOH A 197 1797 184 HOH HOH . 
G 5 HOH A 198 1798 223 HOH HOH . 
G 5 HOH A 199 1799 170 HOH HOH . 
G 5 HOH A 200 1800 114 HOH HOH . 
G 5 HOH A 201 1801 55 HOH HOH . 
G 5 HOH A 202 1802 113 HOH HOH . 
G 5 HOH A 203 1803 216 HOH HOH . 
G 5 HOH A 204 1804 179 HOH HOH . 
G 5 HOH A 205 1805 272 HOH HOH . 
G 5 HOH A 206 1806 140 HOH HOH . 
G 5 HOH A 207 1807 242 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 EDO . . . B 2 -21.147 -19.695 3.782 1 76.17 0 C1 EDO 1501 A 1 
HETATM 2 O O1 EDO . . . B 2 -21.821 -19.289 4.956 1 70.04 0 O1 EDO 1501 A 1 
HETATM 3 C C2 EDO . . . B 2 -20.721 -18.556 2.925 1 79.25 0 C2 EDO 1501 A 1 
HETATM 4 O O2 EDO . . . B 2 -21.526 -18.391 1.772 1 81.09 0 O2 EDO 1501 A 1 
HETATM 5 H H11 EDO . . . B 2 -21.74 -20.277 3.262 1 75.24 0 H11 EDO 1501 A 1 
HETATM 6 H H12 EDO . . . B 2 -20.356 -20.216 4.033 1 75.36 0 H12 EDO 1501 A 1 
HETATM 7 H HO1 EDO . . . B 2 -22.166 -19.902 5.388 0 43.41 0 HO1 EDO 1501 A 1 
HETATM 8 H H21 EDO . . . B 2 -19.792 -18.702 2.647 1 78.96 0 H21 EDO 1501 A 1 
HETATM 9 H H22 EDO . . . B 2 -20.752 -17.732 3.455 1 78.95 0 H22 EDO 1501 A 1 
HETATM 10 H HO2 EDO . . . B 2 -22.297 -18.13 2.004 1 80.55 0 HO2 EDO 1501 A 1 
#
_model_server_stats.io_time_ms              60 
_model_server_stats.parse_time_ms           16 
_model_server_stats.create_model_time_ms    6 
_model_server_stats.query_time_ms           288 
_model_server_stats.encode_time_ms          7 
_model_server_stats.element_count           10 
#