data_8OGA # _model_server_result.job_id F9yxstzdNE_68K8wPiuu8Q _model_server_result.datetime_utc '2024-11-16 05:42:43' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8oga # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":1406}' # _entry.id 8OGA # _exptl.entry_id 8OGA _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 414.543 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 5-[1-(4-methoxyphenyl)cyclopropyl]-8-(4-methylpiperazin-1-yl)-2,3-dihydroimidazo[2,1-a]isoquinoline _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 8OGA _cell.length_a 81.581 _cell.length_b 81.581 _cell.length_c 234.805 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8OGA _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 61 2 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id G _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C26 H30 N4 O' _chem_comp.formula_weight 414.543 _chem_comp.id VLW _chem_comp.mon_nstd_flag . _chem_comp.name 5-[1-(4-methoxyphenyl)cyclopropyl]-8-(4-methylpiperazin-1-yl)-2,3-dihydroimidazo[2,1-a]isoquinoline _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C27 C26 VLW sing 394 n n C27 N28 VLW sing 395 n n C31 N28 VLW sing 396 n n C26 N14 VLW sing 397 n n N28 C29 VLW sing 398 n n N14 C2 VLW sing 399 n n N14 C30 VLW sing 400 n n C1 C2 VLW doub 401 n y C1 C6 VLW sing 402 n y C2 C3 VLW sing 403 n y C29 C30 VLW sing 404 n n C6 C5 VLW doub 405 n y C22 C23 VLW doub 406 n y C22 C21 VLW sing 407 n y C3 C4 VLW doub 408 n y C5 C4 VLW sing 409 n y C5 C10 VLW sing 410 n n O24 C21 VLW sing 411 n n O24 C25 VLW sing 412 n n C4 C7 VLW sing 413 n n C23 C16 VLW sing 414 n y N13 C10 VLW doub 415 n n N13 C12 VLW sing 416 n n C10 N9 VLW sing 417 n n C21 C20 VLW doub 418 n y C7 C8 VLW doub 419 n n N9 C11 VLW sing 420 n n N9 C8 VLW sing 421 n n C12 C11 VLW sing 422 n n C8 C15 VLW sing 423 n n C16 C15 VLW sing 424 n n C16 C19 VLW doub 425 n y C20 C19 VLW sing 426 n y C15 C17 VLW sing 427 n n C15 C18 VLW sing 428 n n C17 C18 VLW sing 429 n n C1 H1 VLW sing 430 n n C3 H2 VLW sing 431 n n C11 H3 VLW sing 432 n n C12 H5 VLW sing 433 n n C12 H6 VLW sing 434 n n C17 H7 VLW sing 435 n n C17 H8 VLW sing 436 n n C18 H9 VLW sing 437 n n C18 H10 VLW sing 438 n n C19 H11 VLW sing 439 n n C20 H12 VLW sing 440 n n C22 H13 VLW sing 441 n n C23 H14 VLW sing 442 n n C25 H15 VLW sing 443 n n C25 H16 VLW sing 444 n n C25 H17 VLW sing 445 n n C26 H18 VLW sing 446 n n C26 H19 VLW sing 447 n n C27 H20 VLW sing 448 n n C27 H21 VLW sing 449 n n C29 H22 VLW sing 450 n n C29 H23 VLW sing 451 n n C30 H24 VLW sing 452 n n C30 H25 VLW sing 453 n n C6 H26 VLW sing 454 n n C7 H27 VLW sing 455 n n C31 H30 VLW sing 456 n n C31 H31 VLW sing 457 n n C31 H32 VLW sing 458 n n C11 H4 VLW sing 459 n n # _atom_sites.entry_id 8OGA _atom_sites.fract_transf_matrix[1][1] 0.012258 _atom_sites.fract_transf_matrix[1][2] 0.007077 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014154 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004259 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 EDO P 1 1401 1401 EDO EDO . C 2 EDO P 1 1402 1402 EDO EDO . D 2 EDO P 1 1403 1404 EDO EDO . E 3 DMS P 1 1404 1405 DMS DMS . F 3 DMS P 1 1405 1406 DMS DMS . G 4 VLW P 1 1406 1403 VLW LI1 . H 5 HOH P 1 1501 42 HOH HOH . H 5 HOH P 2 1502 8 HOH HOH . H 5 HOH P 3 1503 43 HOH HOH . H 5 HOH P 4 1504 17 HOH HOH . H 5 HOH P 5 1505 13 HOH HOH . H 5 HOH P 6 1506 21 HOH HOH . H 5 HOH P 7 1507 60 HOH HOH . H 5 HOH P 8 1508 33 HOH HOH . H 5 HOH P 9 1509 10 HOH HOH . H 5 HOH P 10 1510 20 HOH HOH . H 5 HOH P 11 1511 19 HOH HOH . H 5 HOH P 12 1512 16 HOH HOH . H 5 HOH P 13 1513 30 HOH HOH . H 5 HOH P 14 1514 63 HOH HOH . H 5 HOH P 15 1515 65 HOH HOH . H 5 HOH P 16 1516 11 HOH HOH . H 5 HOH P 17 1517 57 HOH HOH . H 5 HOH P 18 1518 6 HOH HOH . H 5 HOH P 19 1519 22 HOH HOH . H 5 HOH P 20 1520 18 HOH HOH . H 5 HOH P 21 1521 28 HOH HOH . H 5 HOH P 22 1522 40 HOH HOH . H 5 HOH P 23 1523 12 HOH HOH . H 5 HOH P 24 1524 46 HOH HOH . H 5 HOH P 25 1525 32 HOH HOH . H 5 HOH P 26 1526 24 HOH HOH . H 5 HOH P 27 1527 25 HOH HOH . H 5 HOH P 28 1528 9 HOH HOH . H 5 HOH P 29 1529 7 HOH HOH . H 5 HOH P 30 1530 39 HOH HOH . H 5 HOH P 31 1531 36 HOH HOH . H 5 HOH P 32 1532 3 HOH HOH . H 5 HOH P 33 1533 38 HOH HOH . H 5 HOH P 34 1534 27 HOH HOH . H 5 HOH P 35 1535 34 HOH HOH . H 5 HOH P 36 1536 44 HOH HOH . H 5 HOH P 37 1537 26 HOH HOH . H 5 HOH P 38 1538 23 HOH HOH . H 5 HOH P 39 1539 59 HOH HOH . H 5 HOH P 40 1540 47 HOH HOH . H 5 HOH P 41 1541 62 HOH HOH . H 5 HOH P 42 1542 61 HOH HOH . H 5 HOH P 43 1543 14 HOH HOH . H 5 HOH P 44 1544 56 HOH HOH . H 5 HOH P 45 1545 45 HOH HOH . H 5 HOH P 46 1546 5 HOH HOH . H 5 HOH P 47 1547 31 HOH HOH . H 5 HOH P 48 1548 2 HOH HOH . H 5 HOH P 49 1549 52 HOH HOH . H 5 HOH P 50 1550 48 HOH HOH . H 5 HOH P 51 1551 29 HOH HOH . H 5 HOH P 52 1552 49 HOH HOH . H 5 HOH P 53 1553 35 HOH HOH . H 5 HOH P 54 1554 50 HOH HOH . H 5 HOH P 55 1555 1 HOH HOH . H 5 HOH P 56 1556 58 HOH HOH . H 5 HOH P 57 1557 64 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 VLW . . . G 4 -19.247 -23.011 5.475 1 95.58 0 C1 VLW 1406 P 1 HETATM 2 C C2 VLW . . . G 4 -18.438 -21.875 5.742 1 101.36 0 C2 VLW 1406 P 1 HETATM 3 C C3 VLW . . . G 4 -17.224 -22.071 6.465 1 84.48 0 C3 VLW 1406 P 1 HETATM 4 C C11 VLW . . . G 4 -15.884 -27.373 8.143 1 82.82 0 C11 VLW 1406 P 1 HETATM 5 C C12 VLW . . . G 4 -17.297 -28.004 7.853 1 71.18 0 C12 VLW 1406 P 1 HETATM 6 C C15 VLW . . . G 4 -14.063 -25.104 9.021 1 86.16 0 C15 VLW 1406 P 1 HETATM 7 C C16 VLW . . . G 4 -12.892 -25.838 8.308 1 94.35 0 C16 VLW 1406 P 1 HETATM 8 C C17 VLW . . . G 4 -13.791 -24.06 10.154 1 75.94 0 C17 VLW 1406 P 1 HETATM 9 C C18 VLW . . . G 4 -14.204 -25.489 10.536 1 73.6 0 C18 VLW 1406 P 1 HETATM 10 C C19 VLW . . . G 4 -12.183 -26.76 9.121 1 86.72 0 C19 VLW 1406 P 1 HETATM 11 C C20 VLW . . . G 4 -11.105 -27.474 8.572 1 99.02 0 C20 VLW 1406 P 1 HETATM 12 C C21 VLW . . . G 4 -10.712 -27.28 7.226 1 93.03 0 C21 VLW 1406 P 1 HETATM 13 C C22 VLW . . . G 4 -11.419 -26.351 6.405 1 83.27 0 C22 VLW 1406 P 1 HETATM 14 C C23 VLW . . . G 4 -12.519 -25.642 6.93 1 75.95 0 C23 VLW 1406 P 1 HETATM 15 C C25 VLW . . . G 4 -8.641 -28.563 7.689 1 77.77 0 C25 VLW 1406 P 1 HETATM 16 C C26 VLW . . . G 4 -19.483 -20.475 3.941 1 115.44 0 C26 VLW 1406 P 1 HETATM 17 C C27 VLW . . . G 4 -19.58 -19.016 3.393 1 115.24 0 C27 VLW 1406 P 1 HETATM 18 C C29 VLW . . . G 4 -19.679 -18.202 5.751 1 98.29 0 C29 VLW 1406 P 1 HETATM 19 C C30 VLW . . . G 4 -19.578 -19.689 6.231 1 97.08 0 C30 VLW 1406 P 1 HETATM 20 C C4 VLW . . . G 4 -16.865 -23.368 6.905 1 83.35 0 C4 VLW 1406 P 1 HETATM 21 C C5 VLW . . . G 4 -17.718 -24.496 6.645 1 82.76 0 C5 VLW 1406 P 1 HETATM 22 C C6 VLW . . . G 4 -18.908 -24.312 5.92 1 89.5 0 C6 VLW 1406 P 1 HETATM 23 C C7 VLW . . . G 4 -15.609 -23.613 7.71 1 74.79 0 C7 VLW 1406 P 1 HETATM 24 C C8 VLW . . . G 4 -15.321 -24.877 8.145 1 82.66 0 C8 VLW 1406 P 1 HETATM 25 N N9 VLW . . . G 4 -16.113 -25.939 7.82 1 84.87 0 N9 VLW 1406 P 1 HETATM 26 C C10 VLW . . . G 4 -17.277 -25.842 7.194 1 81.67 0 C10 VLW 1406 P 1 HETATM 27 N N13 VLW . . . G 4 -18.025 -26.901 7.181 1 78.81 0 N13 VLW 1406 P 1 HETATM 28 N N14 VLW . . . G 4 -18.847 -20.569 5.278 1 104.91 0 N14 VLW 1406 P 1 HETATM 29 O O24 VLW . . . G 4 -9.624 -28.05 6.782 1 88.6 0 O24 VLW 1406 P 1 HETATM 30 N N28 VLW . . . G 4 -20.183 -18.05 4.345 1 111.56 0 N28 VLW 1406 P 1 HETATM 31 C C31 VLW . . . G 4 -20.095 -16.688 3.734 1 93.54 0 C31 VLW 1406 P 1 # _model_server_stats.io_time_ms 51 _model_server_stats.parse_time_ms 22 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 310 _model_server_stats.encode_time_ms 13 _model_server_stats.element_count 31 #