data_8OGP
#
_model_server_result.job_id            EYs5rrYPYKAijwfKIoo1dQ 
_model_server_result.datetime_utc      '2024-11-22 23:10:57' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8ogp 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":301}' 
#
_entry.id    8OGP 
#
_exptl.entry_id    8OGP 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              151.206 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            2-[(1~{S})-1-azanylpropyl]phenol 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          95.22 
_cell.angle_gamma         90 
_cell.entry_id            8OGP 
_cell.length_a            118.79 
_cell.length_b            39.08 
_cell.length_c            68.1 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8OGP 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    'C 2y' 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C9 H13 N O' 
_chem_comp.formula_weight    151.206 
_chem_comp.id                SYG 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              2-[(1~{S})-1-azanylpropyl]phenol 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C6 C7 SYG doub 290 n y 
C6 C5 SYG sing 291 n y 
C7 C8 SYG sing 292 n y 
C5 C4 SYG doub 293 n y 
C8 O SYG sing 294 n n 
C8 C3 SYG doub 295 n y 
N C2 SYG sing 296 n n 
C4 C3 SYG sing 297 n y 
C3 C2 SYG sing 298 n n 
C2 C1 SYG sing 299 n n 
C1 C SYG sing 300 n n 
C4 H1 SYG sing 301 n n 
C5 H2 SYG sing 302 n n 
C6 H3 SYG sing 303 n n 
C7 H4 SYG sing 304 n n 
O H5 SYG sing 305 n n 
C2 H6 SYG sing 306 n n 
N H7 SYG sing 307 n n 
N H8 SYG sing 308 n n 
C1 H10 SYG sing 309 n n 
C1 H11 SYG sing 310 n n 
C H12 SYG sing 311 n n 
C H13 SYG sing 312 n n 
C H14 SYG sing 313 n n 
#
_atom_sites.entry_id                     8OGP 
_atom_sites.fract_transf_matrix[1][1]    0.008418 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.000769 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.025589 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.014745 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 SYG A 1 301 301 SYG LIG . 
D 3 MG B 1 301 1 MG MG . 
E 4 HOH A 1 401 255 HOH HOH . 
E 4 HOH A 2 402 38 HOH HOH . 
E 4 HOH A 3 403 104 HOH HOH . 
E 4 HOH A 4 404 190 HOH HOH . 
E 4 HOH A 5 405 215 HOH HOH . 
E 4 HOH A 6 406 86 HOH HOH . 
E 4 HOH A 7 407 152 HOH HOH . 
E 4 HOH A 8 408 132 HOH HOH . 
E 4 HOH A 9 409 87 HOH HOH . 
E 4 HOH A 10 410 203 HOH HOH . 
E 4 HOH A 11 411 115 HOH HOH . 
E 4 HOH A 12 412 241 HOH HOH . 
E 4 HOH A 13 413 168 HOH HOH . 
E 4 HOH A 14 414 238 HOH HOH . 
E 4 HOH A 15 415 40 HOH HOH . 
E 4 HOH A 16 416 22 HOH HOH . 
E 4 HOH A 17 417 154 HOH HOH . 
E 4 HOH A 18 418 89 HOH HOH . 
E 4 HOH A 19 419 227 HOH HOH . 
E 4 HOH A 20 420 125 HOH HOH . 
E 4 HOH A 21 421 70 HOH HOH . 
E 4 HOH A 22 422 35 HOH HOH . 
E 4 HOH A 23 423 196 HOH HOH . 
E 4 HOH A 24 424 48 HOH HOH . 
E 4 HOH A 25 425 9 HOH HOH . 
E 4 HOH A 26 426 3 HOH HOH . 
E 4 HOH A 27 427 12 HOH HOH . 
E 4 HOH A 28 428 207 HOH HOH . 
E 4 HOH A 29 429 11 HOH HOH . 
E 4 HOH A 30 430 183 HOH HOH . 
E 4 HOH A 31 431 193 HOH HOH . 
E 4 HOH A 32 432 172 HOH HOH . 
E 4 HOH A 33 433 10 HOH HOH . 
E 4 HOH A 34 434 236 HOH HOH . 
E 4 HOH A 35 435 7 HOH HOH . 
E 4 HOH A 36 436 127 HOH HOH . 
E 4 HOH A 37 437 1 HOH HOH . 
E 4 HOH A 38 438 26 HOH HOH . 
E 4 HOH A 39 439 46 HOH HOH . 
E 4 HOH A 40 440 63 HOH HOH . 
E 4 HOH A 41 441 85 HOH HOH . 
E 4 HOH A 42 442 36 HOH HOH . 
E 4 HOH A 43 443 105 HOH HOH . 
E 4 HOH A 44 444 151 HOH HOH . 
E 4 HOH A 45 445 65 HOH HOH . 
E 4 HOH A 46 446 32 HOH HOH . 
E 4 HOH A 47 447 56 HOH HOH . 
E 4 HOH A 48 448 106 HOH HOH . 
E 4 HOH A 49 449 64 HOH HOH . 
E 4 HOH A 50 450 27 HOH HOH . 
E 4 HOH A 51 451 108 HOH HOH . 
E 4 HOH A 52 452 134 HOH HOH . 
E 4 HOH A 53 453 16 HOH HOH . 
E 4 HOH A 54 454 186 HOH HOH . 
E 4 HOH A 55 455 198 HOH HOH . 
E 4 HOH A 56 456 189 HOH HOH . 
E 4 HOH A 57 457 165 HOH HOH . 
E 4 HOH A 58 458 100 HOH HOH . 
E 4 HOH A 59 459 157 HOH HOH . 
E 4 HOH A 60 460 174 HOH HOH . 
E 4 HOH A 61 461 43 HOH HOH . 
E 4 HOH A 62 462 28 HOH HOH . 
E 4 HOH A 63 463 45 HOH HOH . 
E 4 HOH A 64 464 52 HOH HOH . 
E 4 HOH A 65 465 83 HOH HOH . 
E 4 HOH A 66 466 234 HOH HOH . 
E 4 HOH A 67 467 98 HOH HOH . 
E 4 HOH A 68 468 13 HOH HOH . 
E 4 HOH A 69 469 195 HOH HOH . 
E 4 HOH A 70 470 161 HOH HOH . 
E 4 HOH A 71 471 128 HOH HOH . 
E 4 HOH A 72 472 145 HOH HOH . 
E 4 HOH A 73 473 50 HOH HOH . 
E 4 HOH A 74 474 34 HOH HOH . 
E 4 HOH A 75 475 150 HOH HOH . 
E 4 HOH A 76 476 41 HOH HOH . 
E 4 HOH A 77 477 76 HOH HOH . 
E 4 HOH A 78 478 156 HOH HOH . 
E 4 HOH A 79 479 24 HOH HOH . 
E 4 HOH A 80 480 137 HOH HOH . 
E 4 HOH A 81 481 176 HOH HOH . 
E 4 HOH A 82 482 155 HOH HOH . 
E 4 HOH A 83 483 60 HOH HOH . 
E 4 HOH A 84 484 200 HOH HOH . 
E 4 HOH A 85 485 25 HOH HOH . 
E 4 HOH A 86 486 202 HOH HOH . 
E 4 HOH A 87 487 103 HOH HOH . 
E 4 HOH A 88 488 110 HOH HOH . 
E 4 HOH A 89 489 102 HOH HOH . 
E 4 HOH A 90 490 124 HOH HOH . 
E 4 HOH A 91 491 75 HOH HOH . 
E 4 HOH A 92 492 93 HOH HOH . 
E 4 HOH A 93 493 49 HOH HOH . 
E 4 HOH A 94 494 199 HOH HOH . 
E 4 HOH A 95 495 113 HOH HOH . 
E 4 HOH A 96 496 224 HOH HOH . 
E 4 HOH A 97 497 81 HOH HOH . 
E 4 HOH A 98 498 178 HOH HOH . 
E 4 HOH A 99 499 160 HOH HOH . 
E 4 HOH A 100 500 131 HOH HOH . 
E 4 HOH A 101 501 221 HOH HOH . 
E 4 HOH A 102 502 243 HOH HOH . 
E 4 HOH A 103 503 117 HOH HOH . 
E 4 HOH A 104 504 121 HOH HOH . 
E 4 HOH A 105 505 223 HOH HOH . 
E 4 HOH A 106 506 212 HOH HOH . 
E 4 HOH A 107 507 141 HOH HOH . 
E 4 HOH A 108 508 206 HOH HOH . 
E 4 HOH A 109 509 170 HOH HOH . 
E 4 HOH A 110 510 230 HOH HOH . 
E 4 HOH A 111 511 244 HOH HOH . 
E 4 HOH A 112 512 133 HOH HOH . 
F 4 HOH B 1 401 112 HOH HOH . 
F 4 HOH B 2 402 84 HOH HOH . 
F 4 HOH B 3 403 68 HOH HOH . 
F 4 HOH B 4 404 254 HOH HOH . 
F 4 HOH B 5 405 138 HOH HOH . 
F 4 HOH B 6 406 62 HOH HOH . 
F 4 HOH B 7 407 21 HOH HOH . 
F 4 HOH B 8 408 143 HOH HOH . 
F 4 HOH B 9 409 123 HOH HOH . 
F 4 HOH B 10 410 162 HOH HOH . 
F 4 HOH B 11 411 147 HOH HOH . 
F 4 HOH B 12 412 23 HOH HOH . 
F 4 HOH B 13 413 114 HOH HOH . 
F 4 HOH B 14 414 139 HOH HOH . 
F 4 HOH B 15 415 44 HOH HOH . 
F 4 HOH B 16 416 99 HOH HOH . 
F 4 HOH B 17 417 31 HOH HOH . 
F 4 HOH B 18 418 30 HOH HOH . 
F 4 HOH B 19 419 240 HOH HOH . 
F 4 HOH B 20 420 135 HOH HOH . 
F 4 HOH B 21 421 153 HOH HOH . 
F 4 HOH B 22 422 6 HOH HOH . 
F 4 HOH B 23 423 175 HOH HOH . 
F 4 HOH B 24 424 209 HOH HOH . 
F 4 HOH B 25 425 248 HOH HOH . 
F 4 HOH B 26 426 74 HOH HOH . 
F 4 HOH B 27 427 29 HOH HOH . 
F 4 HOH B 28 428 5 HOH HOH . 
F 4 HOH B 29 429 111 HOH HOH . 
F 4 HOH B 30 430 4 HOH HOH . 
F 4 HOH B 31 431 187 HOH HOH . 
F 4 HOH B 32 432 252 HOH HOH . 
F 4 HOH B 33 433 101 HOH HOH . 
F 4 HOH B 34 434 72 HOH HOH . 
F 4 HOH B 35 435 82 HOH HOH . 
F 4 HOH B 36 436 167 HOH HOH . 
F 4 HOH B 37 437 8 HOH HOH . 
F 4 HOH B 38 438 57 HOH HOH . 
F 4 HOH B 39 439 122 HOH HOH . 
F 4 HOH B 40 440 214 HOH HOH . 
F 4 HOH B 41 441 59 HOH HOH . 
F 4 HOH B 42 442 226 HOH HOH . 
F 4 HOH B 43 443 20 HOH HOH . 
F 4 HOH B 44 444 97 HOH HOH . 
F 4 HOH B 45 445 164 HOH HOH . 
F 4 HOH B 46 446 54 HOH HOH . 
F 4 HOH B 47 447 2 HOH HOH . 
F 4 HOH B 48 448 14 HOH HOH . 
F 4 HOH B 49 449 53 HOH HOH . 
F 4 HOH B 50 450 180 HOH HOH . 
F 4 HOH B 51 451 235 HOH HOH . 
F 4 HOH B 52 452 33 HOH HOH . 
F 4 HOH B 53 453 140 HOH HOH . 
F 4 HOH B 54 454 42 HOH HOH . 
F 4 HOH B 55 455 66 HOH HOH . 
F 4 HOH B 56 456 142 HOH HOH . 
F 4 HOH B 57 457 88 HOH HOH . 
F 4 HOH B 58 458 67 HOH HOH . 
F 4 HOH B 59 459 17 HOH HOH . 
F 4 HOH B 60 460 51 HOH HOH . 
F 4 HOH B 61 461 204 HOH HOH . 
F 4 HOH B 62 462 96 HOH HOH . 
F 4 HOH B 63 463 15 HOH HOH . 
F 4 HOH B 64 464 208 HOH HOH . 
F 4 HOH B 65 465 166 HOH HOH . 
F 4 HOH B 66 466 39 HOH HOH . 
F 4 HOH B 67 467 216 HOH HOH . 
F 4 HOH B 68 468 250 HOH HOH . 
F 4 HOH B 69 469 120 HOH HOH . 
F 4 HOH B 70 470 73 HOH HOH . 
F 4 HOH B 71 471 229 HOH HOH . 
F 4 HOH B 72 472 78 HOH HOH . 
F 4 HOH B 73 473 47 HOH HOH . 
F 4 HOH B 74 474 197 HOH HOH . 
F 4 HOH B 75 475 179 HOH HOH . 
F 4 HOH B 76 476 219 HOH HOH . 
F 4 HOH B 77 477 181 HOH HOH . 
F 4 HOH B 78 478 80 HOH HOH . 
F 4 HOH B 79 479 95 HOH HOH . 
F 4 HOH B 80 480 158 HOH HOH . 
F 4 HOH B 81 481 107 HOH HOH . 
F 4 HOH B 82 482 55 HOH HOH . 
F 4 HOH B 83 483 69 HOH HOH . 
F 4 HOH B 84 484 37 HOH HOH . 
F 4 HOH B 85 485 232 HOH HOH . 
F 4 HOH B 86 486 245 HOH HOH . 
F 4 HOH B 87 487 19 HOH HOH . 
F 4 HOH B 88 488 239 HOH HOH . 
F 4 HOH B 89 489 182 HOH HOH . 
F 4 HOH B 90 490 90 HOH HOH . 
F 4 HOH B 91 491 61 HOH HOH . 
F 4 HOH B 92 492 210 HOH HOH . 
F 4 HOH B 93 493 58 HOH HOH . 
F 4 HOH B 94 494 79 HOH HOH . 
F 4 HOH B 95 495 109 HOH HOH . 
F 4 HOH B 96 496 218 HOH HOH . 
F 4 HOH B 97 497 191 HOH HOH . 
F 4 HOH B 98 498 146 HOH HOH . 
F 4 HOH B 99 499 92 HOH HOH . 
F 4 HOH B 100 500 91 HOH HOH . 
F 4 HOH B 101 501 201 HOH HOH . 
F 4 HOH B 102 502 130 HOH HOH . 
F 4 HOH B 103 503 220 HOH HOH . 
F 4 HOH B 104 504 233 HOH HOH . 
F 4 HOH B 105 505 222 HOH HOH . 
F 4 HOH B 106 506 171 HOH HOH . 
F 4 HOH B 107 507 119 HOH HOH . 
F 4 HOH B 108 508 211 HOH HOH . 
F 4 HOH B 109 509 253 HOH HOH . 
F 4 HOH B 110 510 71 HOH HOH . 
F 4 HOH B 111 511 188 HOH HOH . 
F 4 HOH B 112 512 256 HOH HOH . 
F 4 HOH B 113 513 184 HOH HOH . 
F 4 HOH B 114 514 148 HOH HOH . 
F 4 HOH B 115 515 192 HOH HOH . 
F 4 HOH B 116 516 144 HOH HOH . 
F 4 HOH B 117 517 177 HOH HOH . 
F 4 HOH B 118 518 173 HOH HOH . 
F 4 HOH B 119 519 116 HOH HOH . 
F 4 HOH B 120 520 231 HOH HOH . 
F 4 HOH B 121 521 126 HOH HOH . 
F 4 HOH B 122 522 246 HOH HOH . 
F 4 HOH B 123 523 217 HOH HOH . 
F 4 HOH B 124 524 94 HOH HOH . 
F 4 HOH B 125 525 237 HOH HOH . 
F 4 HOH B 126 526 225 HOH HOH . 
F 4 HOH B 127 527 163 HOH HOH . 
F 4 HOH B 128 528 136 HOH HOH . 
F 4 HOH B 129 529 251 HOH HOH . 
F 4 HOH B 130 530 149 HOH HOH . 
F 4 HOH B 131 531 18 HOH HOH . 
F 4 HOH B 132 532 118 HOH HOH . 
F 4 HOH B 133 533 228 HOH HOH . 
F 4 HOH B 134 534 169 HOH HOH . 
F 4 HOH B 135 535 185 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C4 SYG . B . C 2 23.313 -19.385 7.026 0.17 18.8 ? C4 SYG 301 A 1 
HETATM 2 C C5 SYG . B . C 2 23.392 -18.953 8.339 0.17 18.78 ? C5 SYG 301 A 1 
HETATM 3 C C6 SYG . B . C 2 24.495 -18.234 8.767 0.17 18.78 ? C6 SYG 301 A 1 
HETATM 4 C C7 SYG . B . C 2 25.52 -17.946 7.882 0.17 18.81 ? C7 SYG 301 A 1 
HETATM 5 C C8 SYG . B . C 2 25.442 -18.379 6.569 0.17 18.84 ? C8 SYG 301 A 1 
HETATM 6 O O SYG . B . C 2 26.478 -18.087 5.673 0.17 18.88 ? O SYG 301 A 1 
HETATM 7 C C3 SYG . B . C 2 24.339 -19.097 6.141 0.17 18.83 ? C3 SYG 301 A 1 
HETATM 8 C C2 SYG . B . C 2 24.253 -19.574 4.693 0.17 18.84 ? C2 SYG 301 A 1 
HETATM 9 N N SYG . B . C 2 25.099 -20.74 4.526 0.17 18.86 ? N SYG 301 A 1 
HETATM 10 C C1 SYG . B . C 2 22.821 -19.913 4.292 0.17 18.84 ? C1 SYG 301 A 1 
HETATM 11 C C SYG . B . C 2 22.699 -20.285 2.816 0.17 18.83 ? C SYG 301 A 1 
#
_model_server_stats.io_time_ms              108 
_model_server_stats.parse_time_ms           33 
_model_server_stats.create_model_time_ms    6 
_model_server_stats.query_time_ms           283 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           11 
#