data_8OGQ # _model_server_result.job_id q0pMPp8R_gRz1E4WnShtjA _model_server_result.datetime_utc '2024-11-25 20:47:18' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8ogq # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":301}' # _entry.id 8OGQ # _exptl.entry_id 8OGQ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 167.162 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (1S)-1-(4-nitrophenyl)ethan-1-ol _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 95.37 _cell.angle_gamma 90 _cell.entry_id 8OGQ _cell.length_a 119.27 _cell.length_b 38.93 _cell.length_c 68.12 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8OGQ _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall 'C 2y' _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 E O HOH . A HOH 414 3_445 D MG MG . B MG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.105 ? metalc ? metalc2 E O HOH . A HOH 433 3_445 D MG MG . B MG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? metalc ? metalc3 E O HOH . A HOH 452 3_445 D MG MG . B MG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.111 ? metalc ? metalc4 E O HOH . A HOH 455 3_445 D MG MG . B MG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.086 ? metalc ? metalc5 D MG MG . B MG 301 1_555 F O HOH . B HOH 427 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.106 ? metalc ? metalc6 D MG MG . B MG 301 1_555 F O HOH . B HOH 449 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.155 ? # _chem_comp.formula 'C8 H9 N O3' _chem_comp.formula_weight 167.162 _chem_comp.id R8P _chem_comp.mon_nstd_flag . _chem_comp.name (1S)-1-(4-nitrophenyl)ethan-1-ol _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O2 C1 R8P sing 277 n n O N R8P doub 278 n n O1 N R8P sing 279 n n N C5 R8P sing 280 n n C6 C7 R8P doub 281 n y C6 C5 R8P sing 282 n y C7 C2 R8P sing 283 n y C1 C2 R8P sing 284 n n C1 C R8P sing 285 n n C5 C4 R8P doub 286 n y C2 C3 R8P doub 287 n y C4 C3 R8P sing 288 n y C4 H1 R8P sing 289 n n C6 H2 R8P sing 290 n n C7 H3 R8P sing 291 n n C3 H4 R8P sing 292 n n C1 H5 R8P sing 293 n n O2 H6 R8P sing 294 n n C H7 R8P sing 295 n n C H8 R8P sing 296 n n C H9 R8P sing 297 n n # _atom_sites.entry_id 8OGQ _atom_sites.fract_transf_matrix[1][1] 0.008384 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000788 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.025687 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014745 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 R8P A 1 301 301 R8P LIG . D 3 MG B 1 301 1 MG MG . E 4 HOH A 1 401 17 HOH HOH . E 4 HOH A 2 402 53 HOH HOH . E 4 HOH A 3 403 97 HOH HOH . E 4 HOH A 4 404 25 HOH HOH . E 4 HOH A 5 405 101 HOH HOH . E 4 HOH A 6 406 83 HOH HOH . E 4 HOH A 7 407 8 HOH HOH . E 4 HOH A 8 408 28 HOH HOH . E 4 HOH A 9 409 103 HOH HOH . E 4 HOH A 10 410 4 HOH HOH . E 4 HOH A 11 411 98 HOH HOH . E 4 HOH A 12 412 96 HOH HOH . E 4 HOH A 13 413 59 HOH HOH . E 4 HOH A 14 414 91 HOH HOH . E 4 HOH A 15 415 9 HOH HOH . E 4 HOH A 16 416 27 HOH HOH . E 4 HOH A 17 417 11 HOH HOH . E 4 HOH A 18 418 47 HOH HOH . E 4 HOH A 19 419 39 HOH HOH . E 4 HOH A 20 420 60 HOH HOH . E 4 HOH A 21 421 3 HOH HOH . E 4 HOH A 22 422 14 HOH HOH . E 4 HOH A 23 423 33 HOH HOH . E 4 HOH A 24 424 38 HOH HOH . E 4 HOH A 25 425 70 HOH HOH . E 4 HOH A 26 426 58 HOH HOH . E 4 HOH A 27 427 52 HOH HOH . E 4 HOH A 28 428 54 HOH HOH . E 4 HOH A 29 429 16 HOH HOH . E 4 HOH A 30 430 56 HOH HOH . E 4 HOH A 31 431 100 HOH HOH . E 4 HOH A 32 432 85 HOH HOH . E 4 HOH A 33 433 92 HOH HOH . E 4 HOH A 34 434 35 HOH HOH . E 4 HOH A 35 435 23 HOH HOH . E 4 HOH A 36 436 57 HOH HOH . E 4 HOH A 37 437 50 HOH HOH . E 4 HOH A 38 438 78 HOH HOH . E 4 HOH A 39 439 84 HOH HOH . E 4 HOH A 40 440 65 HOH HOH . E 4 HOH A 41 441 55 HOH HOH . E 4 HOH A 42 442 108 HOH HOH . E 4 HOH A 43 443 61 HOH HOH . E 4 HOH A 44 444 29 HOH HOH . E 4 HOH A 45 445 106 HOH HOH . E 4 HOH A 46 446 24 HOH HOH . E 4 HOH A 47 447 109 HOH HOH . E 4 HOH A 48 448 102 HOH HOH . E 4 HOH A 49 449 104 HOH HOH . E 4 HOH A 50 450 87 HOH HOH . E 4 HOH A 51 451 94 HOH HOH . E 4 HOH A 52 452 93 HOH HOH . E 4 HOH A 53 453 72 HOH HOH . E 4 HOH A 54 454 90 HOH HOH . E 4 HOH A 55 455 41 HOH HOH . E 4 HOH A 56 456 107 HOH HOH . F 4 HOH B 1 401 67 HOH HOH . F 4 HOH B 2 402 81 HOH HOH . F 4 HOH B 3 403 22 HOH HOH . F 4 HOH B 4 404 42 HOH HOH . F 4 HOH B 5 405 44 HOH HOH . F 4 HOH B 6 406 71 HOH HOH . F 4 HOH B 7 407 64 HOH HOH . F 4 HOH B 8 408 32 HOH HOH . F 4 HOH B 9 409 95 HOH HOH . F 4 HOH B 10 410 46 HOH HOH . F 4 HOH B 11 411 34 HOH HOH . F 4 HOH B 12 412 31 HOH HOH . F 4 HOH B 13 413 2 HOH HOH . F 4 HOH B 14 414 7 HOH HOH . F 4 HOH B 15 415 48 HOH HOH . F 4 HOH B 16 416 62 HOH HOH . F 4 HOH B 17 417 82 HOH HOH . F 4 HOH B 18 418 6 HOH HOH . F 4 HOH B 19 419 12 HOH HOH . F 4 HOH B 20 420 49 HOH HOH . F 4 HOH B 21 421 73 HOH HOH . F 4 HOH B 22 422 36 HOH HOH . F 4 HOH B 23 423 30 HOH HOH . F 4 HOH B 24 424 10 HOH HOH . F 4 HOH B 25 425 66 HOH HOH . F 4 HOH B 26 426 20 HOH HOH . F 4 HOH B 27 427 26 HOH HOH . F 4 HOH B 28 428 51 HOH HOH . F 4 HOH B 29 429 75 HOH HOH . F 4 HOH B 30 430 13 HOH HOH . F 4 HOH B 31 431 79 HOH HOH . F 4 HOH B 32 432 69 HOH HOH . F 4 HOH B 33 433 18 HOH HOH . F 4 HOH B 34 434 15 HOH HOH . F 4 HOH B 35 435 40 HOH HOH . F 4 HOH B 36 436 43 HOH HOH . F 4 HOH B 37 437 63 HOH HOH . F 4 HOH B 38 438 37 HOH HOH . F 4 HOH B 39 439 76 HOH HOH . F 4 HOH B 40 440 88 HOH HOH . F 4 HOH B 41 441 80 HOH HOH . F 4 HOH B 42 442 45 HOH HOH . F 4 HOH B 43 443 86 HOH HOH . F 4 HOH B 44 444 74 HOH HOH . F 4 HOH B 45 445 111 HOH HOH . F 4 HOH B 46 446 19 HOH HOH . F 4 HOH B 47 447 110 HOH HOH . F 4 HOH B 48 448 68 HOH HOH . F 4 HOH B 49 449 21 HOH HOH . F 4 HOH B 50 450 89 HOH HOH . F 4 HOH B 51 451 99 HOH HOH . F 4 HOH B 52 452 77 HOH HOH . F 4 HOH B 53 453 5 HOH HOH . F 4 HOH B 54 454 105 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C4 R8P . B . C 2 23.249 -19.98 5.498 0.48 22.43 ? C4 R8P 301 A 1 HETATM 2 C C5 R8P . B . C 2 23.957 -19.222 4.575 0.48 23.09 ? C5 R8P 301 A 1 HETATM 3 C C6 R8P . B . C 2 24.872 -18.282 5.023 0.48 22.59 ? C6 R8P 301 A 1 HETATM 4 C C7 R8P . B . C 2 25.074 -18.099 6.382 0.48 21.32 ? C7 R8P 301 A 1 HETATM 5 O O1 R8P . B . C 2 24.501 -18.951 2.374 0.48 27.87 ? O1 R8P 301 A 1 HETATM 6 N N R8P . B . C 2 23.746 -19.413 3.149 0.48 24.19 ? N R8P 301 A 1 HETATM 7 O O R8P . B . C 2 22.649 -20.153 2.686 0.48 28.82 -1 O R8P 301 A 1 HETATM 8 C C3 R8P . B . C 2 23.454 -19.799 6.857 0.48 22.99 ? C3 R8P 301 A 1 HETATM 9 C C2 R8P . B . C 2 24.364 -18.854 7.304 0.48 21.22 ? C2 R8P 301 A 1 HETATM 10 C C1 R8P . B . C 2 24.599 -18.653 8.803 0.48 22.35 ? C1 R8P 301 A 1 HETATM 11 O O2 R8P . B . C 2 24.983 -17.323 9.025 0.48 28.46 ? O2 R8P 301 A 1 HETATM 12 C C R8P . B . C 2 23.381 -18.95 9.676 0.48 24.83 ? C R8P 301 A 1 # _model_server_stats.io_time_ms 16 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 264 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 12 #