data_8OGV # _model_server_result.job_id -Nyxtb_2C5coPS0u4R3hEg _model_server_result.datetime_utc '2025-03-13 08:18:29' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8ogv # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":301}' # _entry.id 8OGV # _exptl.entry_id 8OGV _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 95.36 _cell.angle_gamma 90 _cell.entry_id 8OGV _cell.length_a 118.87 _cell.length_b 39.06 _cell.length_c 68.15 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8OGV _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall 'C 2y' _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 D MG MG . B MG 301 1_555 F O HOH . B HOH 429 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.09 ? metalc ? metalc2 D MG MG . B MG 301 1_555 F O HOH . B HOH 462 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? metalc ? metalc3 D MG MG . B MG 301 1_555 F O HOH . B HOH 467 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.062 ? metalc ? metalc4 D MG MG . B MG 301 1_555 F O HOH . B HOH 470 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.074 ? metalc ? metalc5 D MG MG . B MG 301 1_555 F O HOH . B HOH 473 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.096 ? metalc ? metalc6 D MG MG . B MG 301 1_555 F O HOH . B HOH 474 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.115 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 8OGV _atom_sites.fract_transf_matrix[1][1] 0.008413 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000789 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.025602 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014738 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 R8V A 1 301 301 R8V LIG . D 3 MG B 1 301 1 MG MG . E 4 HOH A 1 401 87 HOH HOH . E 4 HOH A 2 402 122 HOH HOH . E 4 HOH A 3 403 130 HOH HOH . E 4 HOH A 4 404 51 HOH HOH . E 4 HOH A 5 405 44 HOH HOH . E 4 HOH A 6 406 112 HOH HOH . E 4 HOH A 7 407 98 HOH HOH . E 4 HOH A 8 408 104 HOH HOH . E 4 HOH A 9 409 95 HOH HOH . E 4 HOH A 10 410 34 HOH HOH . E 4 HOH A 11 411 70 HOH HOH . E 4 HOH A 12 412 96 HOH HOH . E 4 HOH A 13 413 106 HOH HOH . E 4 HOH A 14 414 8 HOH HOH . E 4 HOH A 15 415 137 HOH HOH . E 4 HOH A 16 416 26 HOH HOH . E 4 HOH A 17 417 13 HOH HOH . E 4 HOH A 18 418 9 HOH HOH . E 4 HOH A 19 419 45 HOH HOH . E 4 HOH A 20 420 72 HOH HOH . E 4 HOH A 21 421 10 HOH HOH . E 4 HOH A 22 422 4 HOH HOH . E 4 HOH A 23 423 107 HOH HOH . E 4 HOH A 24 424 29 HOH HOH . E 4 HOH A 25 425 7 HOH HOH . E 4 HOH A 26 426 55 HOH HOH . E 4 HOH A 27 427 39 HOH HOH . E 4 HOH A 28 428 100 HOH HOH . E 4 HOH A 29 429 57 HOH HOH . E 4 HOH A 30 430 16 HOH HOH . E 4 HOH A 31 431 148 HOH HOH . E 4 HOH A 32 432 93 HOH HOH . E 4 HOH A 33 433 114 HOH HOH . E 4 HOH A 34 434 63 HOH HOH . E 4 HOH A 35 435 117 HOH HOH . E 4 HOH A 36 436 83 HOH HOH . E 4 HOH A 37 437 21 HOH HOH . E 4 HOH A 38 438 77 HOH HOH . E 4 HOH A 39 439 103 HOH HOH . E 4 HOH A 40 440 59 HOH HOH . E 4 HOH A 41 441 81 HOH HOH . E 4 HOH A 42 442 143 HOH HOH . E 4 HOH A 43 443 37 HOH HOH . E 4 HOH A 44 444 115 HOH HOH . E 4 HOH A 45 445 92 HOH HOH . E 4 HOH A 46 446 49 HOH HOH . E 4 HOH A 47 447 73 HOH HOH . E 4 HOH A 48 448 40 HOH HOH . E 4 HOH A 49 449 139 HOH HOH . E 4 HOH A 50 450 67 HOH HOH . E 4 HOH A 51 451 102 HOH HOH . E 4 HOH A 52 452 19 HOH HOH . E 4 HOH A 53 453 121 HOH HOH . E 4 HOH A 54 454 94 HOH HOH . E 4 HOH A 55 455 46 HOH HOH . E 4 HOH A 56 456 85 HOH HOH . E 4 HOH A 57 457 82 HOH HOH . E 4 HOH A 58 458 129 HOH HOH . E 4 HOH A 59 459 97 HOH HOH . E 4 HOH A 60 460 33 HOH HOH . E 4 HOH A 61 461 146 HOH HOH . E 4 HOH A 62 462 69 HOH HOH . E 4 HOH A 63 463 22 HOH HOH . E 4 HOH A 64 464 127 HOH HOH . E 4 HOH A 65 465 71 HOH HOH . E 4 HOH A 66 466 125 HOH HOH . E 4 HOH A 67 467 76 HOH HOH . E 4 HOH A 68 468 145 HOH HOH . F 4 HOH B 1 401 50 HOH HOH . F 4 HOH B 2 402 108 HOH HOH . F 4 HOH B 3 403 99 HOH HOH . F 4 HOH B 4 404 138 HOH HOH . F 4 HOH B 5 405 133 HOH HOH . F 4 HOH B 6 406 60 HOH HOH . F 4 HOH B 7 407 118 HOH HOH . F 4 HOH B 8 408 42 HOH HOH . F 4 HOH B 9 409 38 HOH HOH . F 4 HOH B 10 410 88 HOH HOH . F 4 HOH B 11 411 27 HOH HOH . F 4 HOH B 12 412 30 HOH HOH . F 4 HOH B 13 413 47 HOH HOH . F 4 HOH B 14 414 2 HOH HOH . F 4 HOH B 15 415 144 HOH HOH . F 4 HOH B 16 416 43 HOH HOH . F 4 HOH B 17 417 74 HOH HOH . F 4 HOH B 18 418 11 HOH HOH . F 4 HOH B 19 419 3 HOH HOH . F 4 HOH B 20 420 90 HOH HOH . F 4 HOH B 21 421 119 HOH HOH . F 4 HOH B 22 422 6 HOH HOH . F 4 HOH B 23 423 14 HOH HOH . F 4 HOH B 24 424 64 HOH HOH . F 4 HOH B 25 425 17 HOH HOH . F 4 HOH B 26 426 61 HOH HOH . F 4 HOH B 27 427 54 HOH HOH . F 4 HOH B 28 428 109 HOH HOH . F 4 HOH B 29 429 20 HOH HOH . F 4 HOH B 30 430 5 HOH HOH . F 4 HOH B 31 431 150 HOH HOH . F 4 HOH B 32 432 140 HOH HOH . F 4 HOH B 33 433 132 HOH HOH . F 4 HOH B 34 434 66 HOH HOH . F 4 HOH B 35 435 105 HOH HOH . F 4 HOH B 36 436 111 HOH HOH . F 4 HOH B 37 437 91 HOH HOH . F 4 HOH B 38 438 149 HOH HOH . F 4 HOH B 39 439 113 HOH HOH . F 4 HOH B 40 440 79 HOH HOH . F 4 HOH B 41 441 48 HOH HOH . F 4 HOH B 42 442 128 HOH HOH . F 4 HOH B 43 443 116 HOH HOH . F 4 HOH B 44 444 84 HOH HOH . F 4 HOH B 45 445 18 HOH HOH . F 4 HOH B 46 446 65 HOH HOH . F 4 HOH B 47 447 52 HOH HOH . F 4 HOH B 48 448 12 HOH HOH . F 4 HOH B 49 449 62 HOH HOH . F 4 HOH B 50 450 89 HOH HOH . F 4 HOH B 51 451 136 HOH HOH . F 4 HOH B 52 452 101 HOH HOH . F 4 HOH B 53 453 53 HOH HOH . F 4 HOH B 54 454 134 HOH HOH . F 4 HOH B 55 455 41 HOH HOH . F 4 HOH B 56 456 28 HOH HOH . F 4 HOH B 57 457 86 HOH HOH . F 4 HOH B 58 458 135 HOH HOH . F 4 HOH B 59 459 56 HOH HOH . F 4 HOH B 60 460 80 HOH HOH . F 4 HOH B 61 461 58 HOH HOH . F 4 HOH B 62 462 23 HOH HOH . F 4 HOH B 63 463 123 HOH HOH . F 4 HOH B 64 464 124 HOH HOH . F 4 HOH B 65 465 78 HOH HOH . F 4 HOH B 66 466 141 HOH HOH . F 4 HOH B 67 467 36 HOH HOH . F 4 HOH B 68 468 120 HOH HOH . F 4 HOH B 69 469 32 HOH HOH . F 4 HOH B 70 470 24 HOH HOH . F 4 HOH B 71 471 15 HOH HOH . F 4 HOH B 72 472 142 HOH HOH . F 4 HOH B 73 473 35 HOH HOH . F 4 HOH B 74 474 126 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 3 _atom_site.Cartn_x -25.918 _atom_site.Cartn_y -15.58 _atom_site.Cartn_z 12.053 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 20.52 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 301 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 45 _model_server_stats.parse_time_ms 17 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 428 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #