data_8OHB
#
_model_server_result.job_id            J5fPKDeIY4SfFPM9jRAdAw 
_model_server_result.datetime_utc      '2025-07-06 12:12:50' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8ohb 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":301}' 
#
_entry.id    8OHB 
#
_exptl.entry_id    8OHB 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              143.144 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            5-(2-methoxyethyl)-1,3,4-oxadiazol-2-amine 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          95.41 
_cell.angle_gamma         90 
_cell.entry_id            8OHB 
_cell.length_a            118.88 
_cell.length_b            38.95 
_cell.length_c            68.32 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8OHB 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    'C 2y' 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 D MG MG . B MG 302 1_555 F O HOH . B HOH 441 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.099 ? 
metalc ? metalc2 D MG MG . B MG 302 1_555 F O HOH . B HOH 480 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.052 ? 
metalc ? metalc3 D MG MG . B MG 302 1_555 F O HOH . B HOH 486 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.121 ? 
metalc ? metalc4 D MG MG . B MG 302 1_555 F O HOH . B HOH 492 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.086 ? 
metalc ? metalc5 D MG MG . B MG 302 1_555 F O HOH . B HOH 493 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.059 ? 
metalc ? metalc6 D MG MG . B MG 302 1_555 F O HOH . B HOH 494 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.023 ? 
#
_chem_comp.formula           'C5 H9 N3 O2' 
_chem_comp.formula_weight    143.144 
_chem_comp.id                UHL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              5-(2-methoxyethyl)-1,3,4-oxadiazol-2-amine 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N09 C08 UHL sing 330 n n 
N07 C08 UHL doub 331 n y 
N07 N06 UHL sing 332 n y 
C08 O10 UHL sing 333 n y 
N06 C05 UHL doub 334 n y 
O10 C05 UHL sing 335 n y 
C05 C04 UHL sing 336 n n 
O02 C01 UHL sing 337 n n 
O02 C03 UHL sing 338 n n 
C04 C03 UHL sing 339 n n 
C01 H1 UHL sing 340 n n 
C01 H2 UHL sing 341 n n 
C01 H3 UHL sing 342 n n 
C03 H4 UHL sing 343 n n 
C03 H5 UHL sing 344 n n 
C04 H6 UHL sing 345 n n 
C04 H7 UHL sing 346 n n 
N09 H8 UHL sing 347 n n 
N09 H9 UHL sing 348 n n 
#
_atom_sites.entry_id                     8OHB 
_atom_sites.fract_transf_matrix[1][1]    0.008412 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.000797 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.025674 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.014702 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 UHL B 1 301 301 UHL LIG . 
D 3 MG B 1 302 1 MG MG . 
E 4 HOH A 1 301 168 HOH HOH . 
E 4 HOH A 2 302 92 HOH HOH . 
E 4 HOH A 3 303 82 HOH HOH . 
E 4 HOH A 4 304 69 HOH HOH . 
E 4 HOH A 5 305 115 HOH HOH . 
E 4 HOH A 6 306 89 HOH HOH . 
E 4 HOH A 7 307 27 HOH HOH . 
E 4 HOH A 8 308 112 HOH HOH . 
E 4 HOH A 9 309 152 HOH HOH . 
E 4 HOH A 10 310 119 HOH HOH . 
E 4 HOH A 11 311 59 HOH HOH . 
E 4 HOH A 12 312 90 HOH HOH . 
E 4 HOH A 13 313 173 HOH HOH . 
E 4 HOH A 14 314 6 HOH HOH . 
E 4 HOH A 15 315 111 HOH HOH . 
E 4 HOH A 16 316 39 HOH HOH . 
E 4 HOH A 17 317 121 HOH HOH . 
E 4 HOH A 18 318 149 HOH HOH . 
E 4 HOH A 19 319 20 HOH HOH . 
E 4 HOH A 20 320 5 HOH HOH . 
E 4 HOH A 21 321 84 HOH HOH . 
E 4 HOH A 22 322 13 HOH HOH . 
E 4 HOH A 23 323 57 HOH HOH . 
E 4 HOH A 24 324 4 HOH HOH . 
E 4 HOH A 25 325 2 HOH HOH . 
E 4 HOH A 26 326 10 HOH HOH . 
E 4 HOH A 27 327 64 HOH HOH . 
E 4 HOH A 28 328 23 HOH HOH . 
E 4 HOH A 29 329 65 HOH HOH . 
E 4 HOH A 30 330 16 HOH HOH . 
E 4 HOH A 31 331 34 HOH HOH . 
E 4 HOH A 32 332 114 HOH HOH . 
E 4 HOH A 33 333 125 HOH HOH . 
E 4 HOH A 34 334 58 HOH HOH . 
E 4 HOH A 35 335 165 HOH HOH . 
E 4 HOH A 36 336 99 HOH HOH . 
E 4 HOH A 37 337 19 HOH HOH . 
E 4 HOH A 38 338 85 HOH HOH . 
E 4 HOH A 39 339 171 HOH HOH . 
E 4 HOH A 40 340 78 HOH HOH . 
E 4 HOH A 41 341 44 HOH HOH . 
E 4 HOH A 42 342 161 HOH HOH . 
E 4 HOH A 43 343 164 HOH HOH . 
E 4 HOH A 44 344 29 HOH HOH . 
E 4 HOH A 45 345 50 HOH HOH . 
E 4 HOH A 46 346 51 HOH HOH . 
E 4 HOH A 47 347 97 HOH HOH . 
E 4 HOH A 48 348 110 HOH HOH . 
E 4 HOH A 49 349 122 HOH HOH . 
E 4 HOH A 50 350 24 HOH HOH . 
E 4 HOH A 51 351 106 HOH HOH . 
E 4 HOH A 52 352 66 HOH HOH . 
E 4 HOH A 53 353 147 HOH HOH . 
E 4 HOH A 54 354 170 HOH HOH . 
E 4 HOH A 55 355 166 HOH HOH . 
E 4 HOH A 56 356 177 HOH HOH . 
E 4 HOH A 57 357 142 HOH HOH . 
E 4 HOH A 58 358 83 HOH HOH . 
E 4 HOH A 59 359 26 HOH HOH . 
E 4 HOH A 60 360 48 HOH HOH . 
E 4 HOH A 61 361 63 HOH HOH . 
E 4 HOH A 62 362 141 HOH HOH . 
E 4 HOH A 63 363 172 HOH HOH . 
E 4 HOH A 64 364 145 HOH HOH . 
E 4 HOH A 65 365 30 HOH HOH . 
E 4 HOH A 66 366 60 HOH HOH . 
E 4 HOH A 67 367 36 HOH HOH . 
E 4 HOH A 68 368 120 HOH HOH . 
E 4 HOH A 69 369 72 HOH HOH . 
E 4 HOH A 70 370 37 HOH HOH . 
E 4 HOH A 71 371 137 HOH HOH . 
E 4 HOH A 72 372 96 HOH HOH . 
E 4 HOH A 73 373 53 HOH HOH . 
E 4 HOH A 74 374 132 HOH HOH . 
E 4 HOH A 75 375 178 HOH HOH . 
E 4 HOH A 76 376 49 HOH HOH . 
E 4 HOH A 77 377 134 HOH HOH . 
E 4 HOH A 78 378 176 HOH HOH . 
E 4 HOH A 79 379 163 HOH HOH . 
E 4 HOH A 80 380 113 HOH HOH . 
F 4 HOH B 1 401 138 HOH HOH . 
F 4 HOH B 2 402 124 HOH HOH . 
F 4 HOH B 3 403 150 HOH HOH . 
F 4 HOH B 4 404 155 HOH HOH . 
F 4 HOH B 5 405 81 HOH HOH . 
F 4 HOH B 6 406 128 HOH HOH . 
F 4 HOH B 7 407 175 HOH HOH . 
F 4 HOH B 8 408 146 HOH HOH . 
F 4 HOH B 9 409 139 HOH HOH . 
F 4 HOH B 10 410 38 HOH HOH . 
F 4 HOH B 11 411 73 HOH HOH . 
F 4 HOH B 12 412 18 HOH HOH . 
F 4 HOH B 13 413 25 HOH HOH . 
F 4 HOH B 14 414 154 HOH HOH . 
F 4 HOH B 15 415 167 HOH HOH . 
F 4 HOH B 16 416 42 HOH HOH . 
F 4 HOH B 17 417 95 HOH HOH . 
F 4 HOH B 18 418 40 HOH HOH . 
F 4 HOH B 19 419 45 HOH HOH . 
F 4 HOH B 20 420 11 HOH HOH . 
F 4 HOH B 21 421 153 HOH HOH . 
F 4 HOH B 22 422 7 HOH HOH . 
F 4 HOH B 23 423 162 HOH HOH . 
F 4 HOH B 24 424 107 HOH HOH . 
F 4 HOH B 25 425 9 HOH HOH . 
F 4 HOH B 26 426 55 HOH HOH . 
F 4 HOH B 27 427 103 HOH HOH . 
F 4 HOH B 28 428 100 HOH HOH . 
F 4 HOH B 29 429 104 HOH HOH . 
F 4 HOH B 30 430 3 HOH HOH . 
F 4 HOH B 31 431 93 HOH HOH . 
F 4 HOH B 32 432 12 HOH HOH . 
F 4 HOH B 33 433 8 HOH HOH . 
F 4 HOH B 34 434 87 HOH HOH . 
F 4 HOH B 35 435 118 HOH HOH . 
F 4 HOH B 36 436 32 HOH HOH . 
F 4 HOH B 37 437 76 HOH HOH . 
F 4 HOH B 38 438 71 HOH HOH . 
F 4 HOH B 39 439 62 HOH HOH . 
F 4 HOH B 40 440 15 HOH HOH . 
F 4 HOH B 41 441 17 HOH HOH . 
F 4 HOH B 42 442 61 HOH HOH . 
F 4 HOH B 43 443 46 HOH HOH . 
F 4 HOH B 44 444 79 HOH HOH . 
F 4 HOH B 45 445 109 HOH HOH . 
F 4 HOH B 46 446 108 HOH HOH . 
F 4 HOH B 47 447 91 HOH HOH . 
F 4 HOH B 48 448 117 HOH HOH . 
F 4 HOH B 49 449 43 HOH HOH . 
F 4 HOH B 50 450 47 HOH HOH . 
F 4 HOH B 51 451 70 HOH HOH . 
F 4 HOH B 52 452 86 HOH HOH . 
F 4 HOH B 53 453 105 HOH HOH . 
F 4 HOH B 54 454 123 HOH HOH . 
F 4 HOH B 55 455 41 HOH HOH . 
F 4 HOH B 56 456 14 HOH HOH . 
F 4 HOH B 57 457 88 HOH HOH . 
F 4 HOH B 58 458 126 HOH HOH . 
F 4 HOH B 59 459 54 HOH HOH . 
F 4 HOH B 60 460 140 HOH HOH . 
F 4 HOH B 61 461 67 HOH HOH . 
F 4 HOH B 62 462 174 HOH HOH . 
F 4 HOH B 63 463 98 HOH HOH . 
F 4 HOH B 64 464 102 HOH HOH . 
F 4 HOH B 65 465 151 HOH HOH . 
F 4 HOH B 66 466 116 HOH HOH . 
F 4 HOH B 67 467 31 HOH HOH . 
F 4 HOH B 68 468 148 HOH HOH . 
F 4 HOH B 69 469 75 HOH HOH . 
F 4 HOH B 70 470 169 HOH HOH . 
F 4 HOH B 71 471 74 HOH HOH . 
F 4 HOH B 72 472 77 HOH HOH . 
F 4 HOH B 73 473 22 HOH HOH . 
F 4 HOH B 74 474 56 HOH HOH . 
F 4 HOH B 75 475 52 HOH HOH . 
F 4 HOH B 76 476 21 HOH HOH . 
F 4 HOH B 77 477 129 HOH HOH . 
F 4 HOH B 78 478 157 HOH HOH . 
F 4 HOH B 79 479 160 HOH HOH . 
F 4 HOH B 80 480 28 HOH HOH . 
F 4 HOH B 81 481 130 HOH HOH . 
F 4 HOH B 82 482 131 HOH HOH . 
F 4 HOH B 83 483 144 HOH HOH . 
F 4 HOH B 84 484 68 HOH HOH . 
F 4 HOH B 85 485 158 HOH HOH . 
F 4 HOH B 86 486 35 HOH HOH . 
F 4 HOH B 87 487 179 HOH HOH . 
F 4 HOH B 88 488 127 HOH HOH . 
F 4 HOH B 89 489 101 HOH HOH . 
F 4 HOH B 90 490 159 HOH HOH . 
F 4 HOH B 91 491 136 HOH HOH . 
F 4 HOH B 92 492 135 HOH HOH . 
F 4 HOH B 93 493 33 HOH HOH . 
F 4 HOH B 94 494 133 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C01 UHL . B . C 2 -0.022 -2.165 9.271 0.32 19.71 ? C01 UHL 301 B 1 
HETATM 2 C C03 UHL . B . C 2 -1.759 -3.607 8.549 0.32 19.71 ? C03 UHL 301 B 1 
HETATM 3 C C04 UHL . B . C 2 -2.075 -4.411 9.796 0.32 19.71 ? C04 UHL 301 B 1 
HETATM 4 C C05 UHL . B . C 2 -0.981 -5.432 10.107 0.32 19.71 ? C05 UHL 301 B 1 
HETATM 5 C C08 UHL . B . C 2 0.401 -7.123 9.935 0.32 19.71 ? C08 UHL 301 B 1 
HETATM 6 N N06 UHL . B . C 2 -0.303 -5.52 11.229 0.32 19.71 ? N06 UHL 301 B 1 
HETATM 7 N N07 UHL . B . C 2 0.57 -6.578 11.116 0.32 19.71 ? N07 UHL 301 B 1 
HETATM 8 N N09 UHL . B . C 2 1.088 -8.253 9.351 0.32 19.71 ? N09 UHL 301 B 1 
HETATM 9 O O02 UHL . B . C 2 -0.394 -3.34 8.616 0.32 19.71 ? O02 UHL 301 B 1 
HETATM 10 O O10 UHL . B . C 2 -0.555 -6.418 9.3 0.32 19.71 ? O10 UHL 301 B 1 
#
_model_server_stats.io_time_ms              25 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           229 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           10 
#