data_8OHR # _model_server_result.job_id OORZQ_5ht8a29rfDqlDpTA _model_server_result.datetime_utc '2024-11-28 10:04:23' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8ohr # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":604}' # _entry.id 8OHR # _exptl.entry_id 8OHR _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 221.208 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-acetamido-2-deoxy-beta-D-glucopyranose _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 98.433 _cell.angle_gamma 90 _cell.entry_id 8OHR _cell.length_a 44.436 _cell.length_b 71.08 _cell.length_c 78.232 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8OHR _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id F _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 279 AAA CYS 437 1_555 A SG CYS 384 AAA CYS 542 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.961 ? covale ? covale1 A ND2 ASN 301 AAA ASN 459 1_555 F C1 NAG . AAA NAG 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.464 ? # _chem_comp.formula 'C8 H15 N O6' _chem_comp.formula_weight 221.208 _chem_comp.id NAG _chem_comp.mon_nstd_flag . _chem_comp.name 2-acetamido-2-deoxy-beta-D-glucopyranose _chem_comp.type 'd-saccharide, beta linking' _chem_comp.pdbx_synonyms N-acetyl-beta-D-glucosamine;2-acetamido-2-deoxy-beta-D-glucose;2-acetamido-2-deoxy-D-glucose;2-acetamido-2-deoxy-glucose;N-ACETYL-D-GLUCOSAMINE # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 NAG sing 246 n n C1 O1 NAG sing 247 n n C1 O5 NAG sing 248 n n C1 H1 NAG sing 249 n n C2 C3 NAG sing 250 n n C2 N2 NAG sing 251 n n C2 H2 NAG sing 252 n n C3 C4 NAG sing 253 n n C3 O3 NAG sing 254 n n C3 H3 NAG sing 255 n n C4 C5 NAG sing 256 n n C4 O4 NAG sing 257 n n C4 H4 NAG sing 258 n n C5 C6 NAG sing 259 n n C5 O5 NAG sing 260 n n C5 H5 NAG sing 261 n n C6 O6 NAG sing 262 n n C6 H61 NAG sing 263 n n C6 H62 NAG sing 264 n n C7 C8 NAG sing 265 n n C7 N2 NAG sing 266 n n C7 O7 NAG doub 267 n n C8 H81 NAG sing 268 n n C8 H82 NAG sing 269 n n C8 H83 NAG sing 270 n n N2 HN2 NAG sing 271 n n O1 HO1 NAG sing 272 n n O3 HO3 NAG sing 273 n n O4 HO4 NAG sing 274 n n O6 HO6 NAG sing 275 n n # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.identifier _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version NAG DGlcpNAcb 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1 NAG N-acetyl-b-D-glucopyranosamine 'COMMON NAME' GMML 1 NAG b-D-GlcpNAc 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1 NAG GlcNAc 'SNFG CARBOHYDRATE SYMBOL' GMML 1 # _atom_sites.entry_id 8OHR _atom_sites.fract_transf_matrix[1][1] 0.022504 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.003336 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014069 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012922 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 VP5 AAA 1 601 601 VP5 GMD . D 4 EDO AAA 1 602 701 EDO EDO . E 4 EDO AAA 1 603 801 EDO EDO . F 5 NAG AAA 1 604 901 NAG NAG . G 4 EDO AAA 1 605 1001 EDO EDO . H 6 CL AAA 1 606 1 CL CL . I 7 HOH AAA 1 701 115 HOH HOH . I 7 HOH AAA 2 702 164 HOH HOH . I 7 HOH AAA 3 703 150 HOH HOH . I 7 HOH AAA 4 704 168 HOH HOH . I 7 HOH AAA 5 705 143 HOH HOH . I 7 HOH AAA 6 706 110 HOH HOH . I 7 HOH AAA 7 707 157 HOH HOH . I 7 HOH AAA 8 708 174 HOH HOH . I 7 HOH AAA 9 709 159 HOH HOH . I 7 HOH AAA 10 710 80 HOH HOH . I 7 HOH AAA 11 711 35 HOH HOH . I 7 HOH AAA 12 712 40 HOH HOH . I 7 HOH AAA 13 713 4 HOH HOH . I 7 HOH AAA 14 714 178 HOH HOH . I 7 HOH AAA 15 715 165 HOH HOH . I 7 HOH AAA 16 716 118 HOH HOH . I 7 HOH AAA 17 717 141 HOH HOH . I 7 HOH AAA 18 718 172 HOH HOH . I 7 HOH AAA 19 719 173 HOH HOH . I 7 HOH AAA 20 720 108 HOH HOH . I 7 HOH AAA 21 721 163 HOH HOH . I 7 HOH AAA 22 722 43 HOH HOH . I 7 HOH AAA 23 723 6 HOH HOH . I 7 HOH AAA 24 724 120 HOH HOH . I 7 HOH AAA 25 725 55 HOH HOH . I 7 HOH AAA 26 726 94 HOH HOH . I 7 HOH AAA 27 727 14 HOH HOH . I 7 HOH AAA 28 728 56 HOH HOH . I 7 HOH AAA 29 729 171 HOH HOH . I 7 HOH AAA 30 730 131 HOH HOH . I 7 HOH AAA 31 731 144 HOH HOH . I 7 HOH AAA 32 732 74 HOH HOH . I 7 HOH AAA 33 733 10 HOH HOH . I 7 HOH AAA 34 734 42 HOH HOH . I 7 HOH AAA 35 735 126 HOH HOH . I 7 HOH AAA 36 736 87 HOH HOH . I 7 HOH AAA 37 737 41 HOH HOH . I 7 HOH AAA 38 738 82 HOH HOH . I 7 HOH AAA 39 739 19 HOH HOH . I 7 HOH AAA 40 740 45 HOH HOH . I 7 HOH AAA 41 741 63 HOH HOH . I 7 HOH AAA 42 742 28 HOH HOH . I 7 HOH AAA 43 743 129 HOH HOH . I 7 HOH AAA 44 744 23 HOH HOH . I 7 HOH AAA 45 745 17 HOH HOH . I 7 HOH AAA 46 746 34 HOH HOH . I 7 HOH AAA 47 747 75 HOH HOH . I 7 HOH AAA 48 748 191 HOH HOH . I 7 HOH AAA 49 749 133 HOH HOH . I 7 HOH AAA 50 750 111 HOH HOH . I 7 HOH AAA 51 751 124 HOH HOH . I 7 HOH AAA 52 752 152 HOH HOH . I 7 HOH AAA 53 753 88 HOH HOH . I 7 HOH AAA 54 754 160 HOH HOH . I 7 HOH AAA 55 755 30 HOH HOH . I 7 HOH AAA 56 756 109 HOH HOH . I 7 HOH AAA 57 757 3 HOH HOH . I 7 HOH AAA 58 758 142 HOH HOH . I 7 HOH AAA 59 759 134 HOH HOH . I 7 HOH AAA 60 760 37 HOH HOH . I 7 HOH AAA 61 761 188 HOH HOH . I 7 HOH AAA 62 762 73 HOH HOH . I 7 HOH AAA 63 763 53 HOH HOH . I 7 HOH AAA 64 764 132 HOH HOH . I 7 HOH AAA 65 765 66 HOH HOH . I 7 HOH AAA 66 766 103 HOH HOH . I 7 HOH AAA 67 767 85 HOH HOH . I 7 HOH AAA 68 768 60 HOH HOH . I 7 HOH AAA 69 769 127 HOH HOH . I 7 HOH AAA 70 770 145 HOH HOH . I 7 HOH AAA 71 771 112 HOH HOH . I 7 HOH AAA 72 772 98 HOH HOH . I 7 HOH AAA 73 773 151 HOH HOH . I 7 HOH AAA 74 774 156 HOH HOH . I 7 HOH AAA 75 775 176 HOH HOH . I 7 HOH AAA 76 776 22 HOH HOH . I 7 HOH AAA 77 777 123 HOH HOH . I 7 HOH AAA 78 778 11 HOH HOH . I 7 HOH AAA 79 779 8 HOH HOH . I 7 HOH AAA 80 780 2 HOH HOH . I 7 HOH AAA 81 781 59 HOH HOH . I 7 HOH AAA 82 782 46 HOH HOH . I 7 HOH AAA 83 783 79 HOH HOH . I 7 HOH AAA 84 784 5 HOH HOH . I 7 HOH AAA 85 785 167 HOH HOH . I 7 HOH AAA 86 786 192 HOH HOH . I 7 HOH AAA 87 787 155 HOH HOH . I 7 HOH AAA 88 788 175 HOH HOH . I 7 HOH AAA 89 789 26 HOH HOH . I 7 HOH AAA 90 790 166 HOH HOH . I 7 HOH AAA 91 791 21 HOH HOH . I 7 HOH AAA 92 792 39 HOH HOH . I 7 HOH AAA 93 793 102 HOH HOH . I 7 HOH AAA 94 794 91 HOH HOH . I 7 HOH AAA 95 795 114 HOH HOH . I 7 HOH AAA 96 796 162 HOH HOH . I 7 HOH AAA 97 797 78 HOH HOH . I 7 HOH AAA 98 798 92 HOH HOH . I 7 HOH AAA 99 799 29 HOH HOH . I 7 HOH AAA 100 800 71 HOH HOH . I 7 HOH AAA 101 801 33 HOH HOH . I 7 HOH AAA 102 802 139 HOH HOH . I 7 HOH AAA 103 803 122 HOH HOH . I 7 HOH AAA 104 804 147 HOH HOH . I 7 HOH AAA 105 805 149 HOH HOH . I 7 HOH AAA 106 806 89 HOH HOH . I 7 HOH AAA 107 807 50 HOH HOH . I 7 HOH AAA 108 808 113 HOH HOH . I 7 HOH AAA 109 809 9 HOH HOH . I 7 HOH AAA 110 810 135 HOH HOH . I 7 HOH AAA 111 811 93 HOH HOH . I 7 HOH AAA 112 812 128 HOH HOH . I 7 HOH AAA 113 813 24 HOH HOH . I 7 HOH AAA 114 814 161 HOH HOH . I 7 HOH AAA 115 815 1 HOH HOH . I 7 HOH AAA 116 816 100 HOH HOH . I 7 HOH AAA 117 817 64 HOH HOH . I 7 HOH AAA 118 818 90 HOH HOH . I 7 HOH AAA 119 819 61 HOH HOH . I 7 HOH AAA 120 820 101 HOH HOH . I 7 HOH AAA 121 821 117 HOH HOH . I 7 HOH AAA 122 822 116 HOH HOH . I 7 HOH AAA 123 823 68 HOH HOH . I 7 HOH AAA 124 824 67 HOH HOH . I 7 HOH AAA 125 825 77 HOH HOH . I 7 HOH AAA 126 826 148 HOH HOH . I 7 HOH AAA 127 827 16 HOH HOH . I 7 HOH AAA 128 828 84 HOH HOH . I 7 HOH AAA 129 829 38 HOH HOH . I 7 HOH AAA 130 830 72 HOH HOH . I 7 HOH AAA 131 831 181 HOH HOH . I 7 HOH AAA 132 832 65 HOH HOH . I 7 HOH AAA 133 833 7 HOH HOH . I 7 HOH AAA 134 834 106 HOH HOH . I 7 HOH AAA 135 835 25 HOH HOH . I 7 HOH AAA 136 836 99 HOH HOH . I 7 HOH AAA 137 837 62 HOH HOH . I 7 HOH AAA 138 838 95 HOH HOH . I 7 HOH AAA 139 839 15 HOH HOH . I 7 HOH AAA 140 840 57 HOH HOH . I 7 HOH AAA 141 841 54 HOH HOH . I 7 HOH AAA 142 842 104 HOH HOH . I 7 HOH AAA 143 843 27 HOH HOH . I 7 HOH AAA 144 844 52 HOH HOH . I 7 HOH AAA 145 845 190 HOH HOH . I 7 HOH AAA 146 846 177 HOH HOH . I 7 HOH AAA 147 847 44 HOH HOH . I 7 HOH AAA 148 848 193 HOH HOH . I 7 HOH AAA 149 849 182 HOH HOH . I 7 HOH AAA 150 850 158 HOH HOH . I 7 HOH AAA 151 851 189 HOH HOH . I 7 HOH AAA 152 852 179 HOH HOH . I 7 HOH AAA 153 853 153 HOH HOH . I 7 HOH AAA 154 854 186 HOH HOH . I 7 HOH AAA 155 855 185 HOH HOH . I 7 HOH AAA 156 856 184 HOH HOH . I 7 HOH AAA 157 857 187 HOH HOH . I 7 HOH AAA 158 858 136 HOH HOH . J 7 HOH BBB 1 101 119 HOH HOH . J 7 HOH BBB 2 102 154 HOH HOH . J 7 HOH BBB 3 103 138 HOH HOH . J 7 HOH BBB 4 104 130 HOH HOH . J 7 HOH BBB 5 105 107 HOH HOH . J 7 HOH BBB 6 106 146 HOH HOH . J 7 HOH BBB 7 107 140 HOH HOH . J 7 HOH BBB 8 108 86 HOH HOH . J 7 HOH BBB 9 109 58 HOH HOH . J 7 HOH BBB 10 110 97 HOH HOH . J 7 HOH BBB 11 111 13 HOH HOH . J 7 HOH BBB 12 112 83 HOH HOH . J 7 HOH BBB 13 113 180 HOH HOH . J 7 HOH BBB 14 114 137 HOH HOH . J 7 HOH BBB 15 115 194 HOH HOH . J 7 HOH BBB 16 116 183 HOH HOH . J 7 HOH BBB 17 117 105 HOH HOH . J 7 HOH BBB 18 118 96 HOH HOH . J 7 HOH BBB 19 119 169 HOH HOH . J 7 HOH BBB 20 120 48 HOH HOH . J 7 HOH BBB 21 121 81 HOH HOH . J 7 HOH BBB 22 122 32 HOH HOH . J 7 HOH BBB 23 123 69 HOH HOH . J 7 HOH BBB 24 124 125 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 NAG . . . F 5 -12.061 19.601 52.962 1 48.59 ? C1 NAG 604 AAA 1 HETATM 2 C C2 NAG . . . F 5 -12.139 20.946 53.751 1 53.13 ? C2 NAG 604 AAA 1 HETATM 3 C C3 NAG . . . F 5 -13.141 20.928 54.918 1 57.92 ? C3 NAG 604 AAA 1 HETATM 4 C C4 NAG . . . F 5 -14.497 20.438 54.43 1 62.05 ? C4 NAG 604 AAA 1 HETATM 5 C C5 NAG . . . F 5 -14.246 19.06 53.823 1 59.09 ? C5 NAG 604 AAA 1 HETATM 6 C C6 NAG . . . F 5 -15.543 18.384 53.448 1 56.28 ? C6 NAG 604 AAA 1 HETATM 7 C C7 NAG . . . F 5 -10.001 22.248 53.728 1 51.18 ? C7 NAG 604 AAA 1 HETATM 8 C C8 NAG . . . F 5 -8.595 22.24 54.242 1 49.49 ? C8 NAG 604 AAA 1 HETATM 9 N N2 NAG . . . F 5 -10.812 21.319 54.267 1 54.28 ? N2 NAG 604 AAA 1 HETATM 10 O O3 NAG . . . F 5 -13.266 22.236 55.503 1 64.6 ? O3 NAG 604 AAA 1 HETATM 11 O O4 NAG . . . F 5 -15.494 20.412 55.479 1 66.72 ? O4 NAG 604 AAA 1 HETATM 12 O O5 NAG . . . F 5 -13.395 19.168 52.67 1 54.73 ? O5 NAG 604 AAA 1 HETATM 13 O O6 NAG . . . F 5 -15.411 17.049 53.939 1 63.28 ? O6 NAG 604 AAA 1 HETATM 14 O O7 NAG . . . F 5 -10.312 23.006 52.811 1 52.04 ? O7 NAG 604 AAA 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 21 _model_server_stats.create_model_time_ms 14 _model_server_stats.query_time_ms 341 _model_server_stats.encode_time_ms 21 _model_server_stats.element_count 14 #