data_8OIJ # _model_server_result.job_id MCR-3yKjCYmHPAswpyAMIw _model_server_result.datetime_utc '2024-11-28 12:25:32' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8oij # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":301}' # _entry.id 8OIJ # _exptl.entry_id 8OIJ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 106.12 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description DI(HYDROXYETHYL)ETHER _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 8OIJ _cell.length_a 76.59 _cell.length_b 76.59 _cell.length_c 268.47 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8OIJ _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 _symmetry.space_group_name_Hall 'P 61 2 (x,y,z+5/12)' _symmetry.space_group_name_H-M 'P 61 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id F _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C4 H10 O3' _chem_comp.formula_weight 106.12 _chem_comp.id PEG _chem_comp.mon_nstd_flag . _chem_comp.name DI(HYDROXYETHYL)ETHER _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 PEG sing 246 n n C1 C2 PEG sing 247 n n C1 H11 PEG sing 248 n n C1 H12 PEG sing 249 n n O1 HO1 PEG sing 250 n n C2 O2 PEG sing 251 n n C2 H21 PEG sing 252 n n C2 H22 PEG sing 253 n n O2 C3 PEG sing 254 n n C3 C4 PEG sing 255 n n C3 H31 PEG sing 256 n n C3 H32 PEG sing 257 n n C4 O4 PEG sing 258 n n C4 H41 PEG sing 259 n n C4 H42 PEG sing 260 n n O4 HO4 PEG sing 261 n n # _atom_sites.entry_id 8OIJ _atom_sites.fract_transf_matrix[1][1] 0.013057 _atom_sites.fract_transf_matrix[1][2] 0.007538 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015076 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.003725 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 EDO A 1 301 276 EDO EDO . F 4 PEG B 1 301 275 PEG PEG . G 3 EDO D 1 1101 277 EDO EDO . H 5 HOH A 1 401 44 HOH HOH . H 5 HOH A 2 402 36 HOH HOH . H 5 HOH A 3 403 33 HOH HOH . H 5 HOH A 4 404 15 HOH HOH . H 5 HOH A 5 405 83 HOH HOH . H 5 HOH A 6 406 73 HOH HOH . H 5 HOH A 7 407 59 HOH HOH . H 5 HOH A 8 408 40 HOH HOH . H 5 HOH A 9 409 4 HOH HOH . H 5 HOH A 10 410 7 HOH HOH . H 5 HOH A 11 411 13 HOH HOH . H 5 HOH A 12 412 88 HOH HOH . H 5 HOH A 13 413 55 HOH HOH . H 5 HOH A 14 414 5 HOH HOH . H 5 HOH A 15 415 18 HOH HOH . H 5 HOH A 16 416 93 HOH HOH . H 5 HOH A 17 417 32 HOH HOH . H 5 HOH A 18 418 6 HOH HOH . H 5 HOH A 19 419 24 HOH HOH . H 5 HOH A 20 420 72 HOH HOH . H 5 HOH A 21 421 28 HOH HOH . H 5 HOH A 22 422 9 HOH HOH . H 5 HOH A 23 423 76 HOH HOH . H 5 HOH A 24 424 77 HOH HOH . H 5 HOH A 25 425 68 HOH HOH . H 5 HOH A 26 426 17 HOH HOH . H 5 HOH A 27 427 20 HOH HOH . H 5 HOH A 28 428 69 HOH HOH . H 5 HOH A 29 429 30 HOH HOH . H 5 HOH A 30 430 50 HOH HOH . H 5 HOH A 31 431 31 HOH HOH . H 5 HOH A 32 432 22 HOH HOH . H 5 HOH A 33 433 64 HOH HOH . H 5 HOH A 34 434 48 HOH HOH . H 5 HOH A 35 435 95 HOH HOH . H 5 HOH A 36 436 60 HOH HOH . H 5 HOH A 37 437 29 HOH HOH . H 5 HOH A 38 438 71 HOH HOH . H 5 HOH A 39 439 92 HOH HOH . H 5 HOH A 40 440 41 HOH HOH . H 5 HOH A 41 441 65 HOH HOH . I 5 HOH B 1 401 39 HOH HOH . I 5 HOH B 2 402 97 HOH HOH . I 5 HOH B 3 403 61 HOH HOH . I 5 HOH B 4 404 27 HOH HOH . I 5 HOH B 5 405 26 HOH HOH . I 5 HOH B 6 406 3 HOH HOH . I 5 HOH B 7 407 81 HOH HOH . I 5 HOH B 8 408 12 HOH HOH . I 5 HOH B 9 409 74 HOH HOH . I 5 HOH B 10 410 14 HOH HOH . I 5 HOH B 11 411 16 HOH HOH . I 5 HOH B 12 412 2 HOH HOH . I 5 HOH B 13 413 1 HOH HOH . I 5 HOH B 14 414 37 HOH HOH . I 5 HOH B 15 415 62 HOH HOH . I 5 HOH B 16 416 35 HOH HOH . I 5 HOH B 17 417 8 HOH HOH . I 5 HOH B 18 418 11 HOH HOH . I 5 HOH B 19 419 10 HOH HOH . I 5 HOH B 20 420 47 HOH HOH . I 5 HOH B 21 421 46 HOH HOH . I 5 HOH B 22 422 52 HOH HOH . I 5 HOH B 23 423 84 HOH HOH . I 5 HOH B 24 424 34 HOH HOH . I 5 HOH B 25 425 25 HOH HOH . I 5 HOH B 26 426 75 HOH HOH . I 5 HOH B 27 427 42 HOH HOH . I 5 HOH B 28 428 53 HOH HOH . I 5 HOH B 29 429 38 HOH HOH . I 5 HOH B 30 430 49 HOH HOH . I 5 HOH B 31 431 19 HOH HOH . I 5 HOH B 32 432 78 HOH HOH . I 5 HOH B 33 433 94 HOH HOH . I 5 HOH B 34 434 70 HOH HOH . I 5 HOH B 35 435 21 HOH HOH . I 5 HOH B 36 436 89 HOH HOH . I 5 HOH B 37 437 79 HOH HOH . I 5 HOH B 38 438 91 HOH HOH . I 5 HOH B 39 439 45 HOH HOH . I 5 HOH B 40 440 57 HOH HOH . I 5 HOH B 41 441 63 HOH HOH . I 5 HOH B 42 442 43 HOH HOH . I 5 HOH B 43 443 58 HOH HOH . I 5 HOH B 44 444 54 HOH HOH . I 5 HOH B 45 445 86 HOH HOH . I 5 HOH B 46 446 56 HOH HOH . I 5 HOH B 47 447 82 HOH HOH . I 5 HOH B 48 448 90 HOH HOH . I 5 HOH B 49 449 85 HOH HOH . I 5 HOH B 50 450 67 HOH HOH . I 5 HOH B 51 451 66 HOH HOH . J 5 HOH C 1 1101 23 HOH HOH . K 5 HOH D 1 1201 96 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PEG . . . F 4 -13.045 -13.943 -6.017 1 46.94 ? C1 PEG 301 B 1 HETATM 2 O O1 PEG . . . F 4 -13.839 -13.421 -7.059 1 46.94 ? O1 PEG 301 B 1 HETATM 3 C C2 PEG . . . F 4 -13.715 -13.842 -4.693 1 46.94 ? C2 PEG 301 B 1 HETATM 4 O O2 PEG . . . F 4 -12.735 -13.817 -3.663 1 46.94 ? O2 PEG 301 B 1 HETATM 5 C C3 PEG . . . F 4 -12.286 -12.503 -3.351 1 46.94 ? C3 PEG 301 B 1 HETATM 6 C C4 PEG . . . F 4 -10.801 -12.463 -3.391 1 46.94 ? C4 PEG 301 B 1 HETATM 7 O O4 PEG . . . F 4 -10.286 -11.212 -2.995 1 46.94 ? O4 PEG 301 B 1 HETATM 8 H H11 PEG . . . F 4 -12.825 -14.988 -6.228 1 2 ? H11 PEG 301 B 1 HETATM 9 H H12 PEG . . . F 4 -12.102 -13.402 -5.98 1 2 ? H12 PEG 301 B 1 HETATM 10 H HO1 PEG . . . F 4 -14.774 -13.495 -6.813 1 2 ? HO1 PEG 301 B 1 HETATM 11 H H21 PEG . . . F 4 -14.318 -12.937 -4.653 1 2 ? H21 PEG 301 B 1 HETATM 12 H H22 PEG . . . F 4 -14.374 -14.697 -4.551 1 2 ? H22 PEG 301 B 1 HETATM 13 H H31 PEG . . . F 4 -12.691 -11.793 -4.07 1 2 ? H31 PEG 301 B 1 HETATM 14 H H32 PEG . . . F 4 -12.636 -12.222 -2.359 1 2 ? H32 PEG 301 B 1 HETATM 15 H H41 PEG . . . F 4 -10.408 -13.233 -2.731 1 2 ? H41 PEG 301 B 1 HETATM 16 H H42 PEG . . . F 4 -10.468 -12.681 -4.404 1 2 ? H42 PEG 301 B 1 HETATM 17 H HO4 PEG . . . F 4 -10.039 -10.703 -3.783 1 2 ? HO4 PEG 301 B 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 270 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 17 #