data_8OJX # _model_server_result.job_id puru5Vh1TZOEE1SjtQtZSA _model_server_result.datetime_utc '2024-11-14 10:49:01' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8ojx # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":204}' # _entry.id 8OJX # _exptl.entry_id 8OJX _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 192.217 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'IRIDIUM ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8OJX _cell.length_a 57.552 _cell.length_b 57.552 _cell.length_c 183.993 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8OJX _symmetry.cell_setting ? _symmetry.Int_Tables_number 98 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 41 2 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'point symmetry operation' ? ? 0 -1 0 -1 0 0 0 0 -1 57.552 57.552 0 3 'point symmetry operation' ? ? -1 0 0 0 -1 0 0 0 1 57.552 57.552 0 4 'point symmetry operation' ? ? 0 1 0 1 0 0 0 0 -1 0 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N ? 3 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 B RH 0OD . A 0OD 201 1_555 F O HOH . A HOH 383 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.952 ? metalc ? metalc2 E IR IR . A IR 204 1_555 F O HOH . A HOH 367 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.112 ? # _chem_comp.formula 'Ir 4' _chem_comp.formula_weight 192.217 _chem_comp.id IR _chem_comp.mon_nstd_flag . _chem_comp.name 'IRIDIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 8OJX _atom_sites.fract_transf_matrix[1][1] 0.017376 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017376 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005435 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 0OD A 1 201 201 0OD 0OD . C 3 IR A 1 202 1 IR IR . D 3 IR A 1 203 2 IR IR . E 3 IR A 1 204 3 IR IR . F 4 HOH A 1 301 79 HOH HOH . F 4 HOH A 2 302 31 HOH HOH . F 4 HOH A 3 303 48 HOH HOH . F 4 HOH A 4 304 58 HOH HOH . F 4 HOH A 5 305 61 HOH HOH . F 4 HOH A 6 306 59 HOH HOH . F 4 HOH A 7 307 43 HOH HOH . F 4 HOH A 8 308 80 HOH HOH . F 4 HOH A 9 309 30 HOH HOH . F 4 HOH A 10 310 14 HOH HOH . F 4 HOH A 11 311 78 HOH HOH . F 4 HOH A 12 312 12 HOH HOH . F 4 HOH A 13 313 3 HOH HOH . F 4 HOH A 14 314 34 HOH HOH . F 4 HOH A 15 315 67 HOH HOH . F 4 HOH A 16 316 73 HOH HOH . F 4 HOH A 17 317 9 HOH HOH . F 4 HOH A 18 318 10 HOH HOH . F 4 HOH A 19 319 7 HOH HOH . F 4 HOH A 20 320 16 HOH HOH . F 4 HOH A 21 321 35 HOH HOH . F 4 HOH A 22 322 27 HOH HOH . F 4 HOH A 23 323 63 HOH HOH . F 4 HOH A 24 324 11 HOH HOH . F 4 HOH A 25 325 13 HOH HOH . F 4 HOH A 26 326 15 HOH HOH . F 4 HOH A 27 327 23 HOH HOH . F 4 HOH A 28 328 8 HOH HOH . F 4 HOH A 29 329 22 HOH HOH . F 4 HOH A 30 330 6 HOH HOH . F 4 HOH A 31 331 64 HOH HOH . F 4 HOH A 32 332 77 HOH HOH . F 4 HOH A 33 333 21 HOH HOH . F 4 HOH A 34 334 32 HOH HOH . F 4 HOH A 35 335 20 HOH HOH . F 4 HOH A 36 336 72 HOH HOH . F 4 HOH A 37 337 4 HOH HOH . F 4 HOH A 38 338 28 HOH HOH . F 4 HOH A 39 339 29 HOH HOH . F 4 HOH A 40 340 19 HOH HOH . F 4 HOH A 41 341 2 HOH HOH . F 4 HOH A 42 342 39 HOH HOH . F 4 HOH A 43 343 26 HOH HOH . F 4 HOH A 44 344 24 HOH HOH . F 4 HOH A 45 345 37 HOH HOH . F 4 HOH A 46 346 45 HOH HOH . F 4 HOH A 47 347 62 HOH HOH . F 4 HOH A 48 348 49 HOH HOH . F 4 HOH A 49 349 75 HOH HOH . F 4 HOH A 50 350 47 HOH HOH . F 4 HOH A 51 351 53 HOH HOH . F 4 HOH A 52 352 40 HOH HOH . F 4 HOH A 53 353 17 HOH HOH . F 4 HOH A 54 354 60 HOH HOH . F 4 HOH A 55 355 69 HOH HOH . F 4 HOH A 56 356 84 HOH HOH . F 4 HOH A 57 357 18 HOH HOH . F 4 HOH A 58 358 42 HOH HOH . F 4 HOH A 59 359 50 HOH HOH . F 4 HOH A 60 360 44 HOH HOH . F 4 HOH A 61 361 71 HOH HOH . F 4 HOH A 62 362 56 HOH HOH . F 4 HOH A 63 363 25 HOH HOH . F 4 HOH A 64 364 76 HOH HOH . F 4 HOH A 65 365 46 HOH HOH . F 4 HOH A 66 366 85 HOH HOH . F 4 HOH A 67 367 1 HOH HOH . F 4 HOH A 68 368 41 HOH HOH . F 4 HOH A 69 369 5 HOH HOH . F 4 HOH A 70 370 57 HOH HOH . F 4 HOH A 71 371 81 HOH HOH . F 4 HOH A 72 372 82 HOH HOH . F 4 HOH A 73 373 33 HOH HOH . F 4 HOH A 74 374 74 HOH HOH . F 4 HOH A 75 375 38 HOH HOH . F 4 HOH A 76 376 70 HOH HOH . F 4 HOH A 77 377 36 HOH HOH . F 4 HOH A 78 378 68 HOH HOH . F 4 HOH A 79 379 66 HOH HOH . F 4 HOH A 80 380 51 HOH HOH . F 4 HOH A 81 381 65 HOH HOH . F 4 HOH A 82 382 52 HOH HOH . F 4 HOH A 83 383 83 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol IR _atom_site.label_atom_id IR _atom_site.label_comp_id IR _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id E _atom_site.label_entity_id 3 _atom_site.Cartn_x 19.181 _atom_site.Cartn_y 39.064 _atom_site.Cartn_z -1.268 _atom_site.occupancy 0.45 _atom_site.B_iso_or_equiv 37.03 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id IR _atom_site.auth_comp_id IR _atom_site.auth_seq_id 204 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 64 _model_server_stats.parse_time_ms 21 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 307 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #