data_8OL9 # _model_server_result.job_id UbvGlytiYwnMH3i-6nqXnw _model_server_result.datetime_utc '2024-11-13 16:04:29' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8ol9 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":302}' # _entry.id 8OL9 # _exptl.entry_id 8OL9 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 7 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8OL9 _cell.length_a 61.44 _cell.length_b 97.27 _cell.length_c 366.47 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8OL9 _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall 'I 2 2' _symmetry.space_group_name_H-M 'I 2 2 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 7 _struct_asym.id H _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 23 A CYS 23 1_555 A SG CYS 88 A CYS 88 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? disulf ? disulf2 A SG CYS 134 A CYS 134 1_555 A SG CYS 194 A CYS 194 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf3 A SG CYS 214 A CYS 214 1_555 B SG CYS 225 B CYS 225 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf4 B SG CYS 22 B CYS 22 1_555 B SG CYS 96 B CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf5 B SG CYS 149 B CYS 149 1_555 B SG CYS 205 B CYS 205 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf6 C SG CYS 26 H CYS 80 1_555 C SG CYS 42 H CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf7 C SG CYS 109 H CYS 163 1_555 D SG CYS 49 L CYS 49 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf8 C SG CYS 156 H CYS 210 1_555 C SG CYS 170 H CYS 224 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? disulf ? disulf9 C SG CYS 181 H CYS 235 1_555 C SG CYS 209 H CYS 263 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf10 D SG CYS 5 L CYS 5 1_555 D SG CYS 16 L CYS 16 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf11 D SG CYS 12 L CYS 12 1_555 D SG CYS 26 L CYS 26 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf12 D SG CYS 28 L CYS 28 1_555 D SG CYS 41 L CYS 41 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? metalc ? metalc1 C OE2 GLU 55 H GLU 109 1_555 H CA CA . H CA 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.226 ? metalc ? metalc2 C O ASN 57 H ASN 111 1_555 H CA CA . H CA 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.263 ? metalc ? metalc3 C O GLU 60 H GLU 114 1_555 H CA CA . H CA 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.251 ? metalc ? metalc4 C OE1 GLU 62 H GLU 116 1_555 H CA CA . H CA 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.631 ? metalc ? metalc5 C OE2 GLU 62 H GLU 116 1_555 H CA CA . H CA 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.585 ? metalc ? metalc6 C OE2 GLU 65 H GLU 119 1_555 H CA CA . H CA 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.04 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 8OL9 _atom_sites.fract_transf_matrix[1][1] 0.016276 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010281 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.002729 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 5 SO4 A 1 301 302 SO4 SO4 . F 6 TRS A 1 302 303 TRS TRS . G 5 SO4 B 1 301 301 SO4 SO4 . H 7 CA H 1 302 302 CA CA . I 8 0GJ H 1 303 501 0GJ 0GJ . J 9 HOH A 1 401 16 HOH HOH . J 9 HOH A 2 402 11 HOH HOH . J 9 HOH A 3 403 49 HOH HOH . J 9 HOH A 4 404 21 HOH HOH . J 9 HOH A 5 405 12 HOH HOH . J 9 HOH A 6 406 25 HOH HOH . J 9 HOH A 7 407 8 HOH HOH . J 9 HOH A 8 408 5 HOH HOH . J 9 HOH A 9 409 32 HOH HOH . J 9 HOH A 10 410 14 HOH HOH . J 9 HOH A 11 411 27 HOH HOH . K 9 HOH B 1 401 33 HOH HOH . K 9 HOH B 2 402 6 HOH HOH . K 9 HOH B 3 403 23 HOH HOH . K 9 HOH B 4 404 26 HOH HOH . K 9 HOH B 5 405 10 HOH HOH . K 9 HOH B 6 406 38 HOH HOH . K 9 HOH B 7 407 9 HOH HOH . K 9 HOH B 8 408 15 HOH HOH . K 9 HOH B 9 409 18 HOH HOH . K 9 HOH B 10 410 3 HOH HOH . K 9 HOH B 11 411 66 HOH HOH . K 9 HOH B 12 412 41 HOH HOH . K 9 HOH B 13 413 7 HOH HOH . K 9 HOH B 14 414 24 HOH HOH . K 9 HOH B 15 415 36 HOH HOH . K 9 HOH B 16 416 19 HOH HOH . K 9 HOH B 17 417 17 HOH HOH . K 9 HOH B 18 418 39 HOH HOH . K 9 HOH B 19 419 67 HOH HOH . K 9 HOH B 20 420 54 HOH HOH . K 9 HOH B 21 421 51 HOH HOH . L 9 HOH H 1 401 55 HOH HOH . L 9 HOH H 2 402 68 HOH HOH . L 9 HOH H 3 403 48 HOH HOH . L 9 HOH H 4 404 64 HOH HOH . M 9 HOH L 1 101 44 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id H _atom_site.label_entity_id 7 _atom_site.Cartn_x -16.668 _atom_site.Cartn_y -29.625 _atom_site.Cartn_z -7.061 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 133.87 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 302 _atom_site.auth_asym_id H _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 23 _model_server_stats.parse_time_ms 133 _model_server_stats.create_model_time_ms 96 _model_server_stats.query_time_ms 430 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #