data_8OMZ
#
_model_server_result.job_id            ANzS6cO1FSwCMjXlQOBvNw 
_model_server_result.datetime_utc      '2024-10-15 11:25:01' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8omz 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"N","auth_seq_id":510}' 
#
_entry.id    8OMZ 
#
_exptl.entry_id    8OMZ 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              482.562 
_entity.id                          6 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            DECYL-BETA-D-MALTOPYRANOSIDE 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          100.424 
_cell.angle_gamma         90 
_cell.entry_id            8OMZ 
_cell.length_a            87.14 
_cell.length_b            118.11 
_cell.length_c            94.93 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8OMZ 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    'P 2yb' 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 6 N N N 
? 6 O N N 
? 6 V N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 B SG CYS 26 B CYS 22 1_555 B SG CYS 100 B CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? 
disulf ? disulf2 D SG CYS 26 D CYS 22 1_555 D SG CYS 100 D CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? 
#
_chem_comp.formula           'C22 H42 O11' 
_chem_comp.formula_weight    482.562 
_chem_comp.id                DMU 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              DECYL-BETA-D-MALTOPYRANOSIDE 
_chem_comp.type              d-saccharide 
_chem_comp.pdbx_synonyms     DECYLMALTOSIDE 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C40 C37 DMU sing 171 n n 
C40 C43 DMU sing 172 n n 
C37 C34 DMU sing 173 n n 
C34 C31 DMU sing 174 n n 
C31 C28 DMU sing 175 n n 
C28 C25 DMU sing 176 n n 
C22 C25 DMU sing 177 n n 
C22 C19 DMU sing 178 n n 
O61 C57 DMU sing 179 n n 
O4 C7 DMU sing 180 n n 
C18 C19 DMU sing 181 n n 
C18 O16 DMU sing 182 n n 
O5 C6 DMU sing 183 n n 
O5 C4 DMU sing 184 n n 
C57 C4 DMU sing 185 n n 
C6 O16 DMU sing 186 n n 
C6 C1 DMU sing 187 n n 
C7 C5 DMU sing 188 n n 
C7 C8 DMU sing 189 n n 
C4 C3 DMU sing 190 n n 
O1 C10 DMU sing 191 n n 
O1 C9 DMU sing 192 n n 
C10 C5 DMU sing 193 n n 
C10 O7 DMU sing 194 n n 
C5 O3 DMU sing 195 n n 
O49 C1 DMU sing 196 n n 
C8 C9 DMU sing 197 n n 
C8 O2 DMU sing 198 n n 
C1 C2 DMU sing 199 n n 
C11 C9 DMU sing 200 n n 
C11 O6 DMU sing 201 n n 
C3 O7 DMU sing 202 n n 
C3 C2 DMU sing 203 n n 
C2 O55 DMU sing 204 n n 
C1 H1 DMU sing 205 n n 
C2 H2 DMU sing 206 n n 
C3 H3 DMU sing 207 n n 
C4 H4 DMU sing 208 n n 
C6 H5 DMU sing 209 n n 
C18 H6 DMU sing 210 n n 
C18 H7 DMU sing 211 n n 
C19 H8 DMU sing 212 n n 
C19 H9 DMU sing 213 n n 
C22 H10 DMU sing 214 n n 
C22 H11 DMU sing 215 n n 
C25 H12 DMU sing 216 n n 
C25 H13 DMU sing 217 n n 
C28 H14 DMU sing 218 n n 
C28 H15 DMU sing 219 n n 
C31 H16 DMU sing 220 n n 
C31 H17 DMU sing 221 n n 
C34 H18 DMU sing 222 n n 
C34 H19 DMU sing 223 n n 
C37 H20 DMU sing 224 n n 
C37 H21 DMU sing 225 n n 
C40 H22 DMU sing 226 n n 
C40 H23 DMU sing 227 n n 
C43 H24 DMU sing 228 n n 
C43 H25 DMU sing 229 n n 
C43 H26 DMU sing 230 n n 
O49 H27 DMU sing 231 n n 
O55 H28 DMU sing 232 n n 
C57 H29 DMU sing 233 n n 
C57 H30 DMU sing 234 n n 
O61 H31 DMU sing 235 n n 
C5 H32 DMU sing 236 n n 
C7 H33 DMU sing 237 n n 
C8 H34 DMU sing 238 n n 
C9 H35 DMU sing 239 n n 
C10 H36 DMU sing 240 n n 
O2 H37 DMU sing 241 n n 
O3 H38 DMU sing 242 n n 
O4 H39 DMU sing 243 n n 
C11 H40 DMU sing 244 n n 
C11 H41 DMU sing 245 n n 
O6 H42 DMU sing 246 n n 
#
_atom_sites.entry_id                     8OMZ 
_atom_sites.fract_transf_matrix[1][1]    0.011476 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.002111 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.008467 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.010711 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 3 TRS A 1 501 450 TRS TRS . 
F 4 BNG A 1 502 455 BNG BNG . 
G 4 BNG A 1 503 456 BNG BNG . 
H 4 BNG A 1 504 457 BNG BNG . 
I 4 BNG A 1 505 458 BNG BNG . 
J 4 BNG A 1 506 459 BNG BNG . 
K 4 BNG A 1 507 460 BNG BNG . 
L 5 1PE A 1 508 703 1PE 1PE . 
M 4 BNG A 1 509 809 BNG BNG . 
N 6 DMU A 1 510 851 DMU DMU . 
O 6 DMU B 1 201 470 DMU DMU . 
P 3 TRS C 1 501 450 TRS TRS . 
Q 4 BNG C 1 502 455 BNG BNG . 
R 4 BNG C 1 503 456 BNG BNG . 
S 4 BNG C 1 504 461 BNG BNG . 
T 5 1PE C 1 505 702 1PE 1PE . 
U 4 BNG C 1 506 801 BNG BNG . 
V 6 DMU D 1 201 471 DMU DMU . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 DMU . . . N 6 10.995 33.262 -3.478 1 97.41 ? C1 DMU 510 A 1 
HETATM 2 C C2 DMU . . . N 6 11.998 33.792 -2.448 1 98.07 ? C2 DMU 510 A 1 
HETATM 3 C C3 DMU . . . N 6 11.272 34.624 -1.377 1 97.93 ? C3 DMU 510 A 1 
HETATM 4 C C4 DMU . . . N 6 10.108 33.826 -0.775 1 98.75 ? C4 DMU 510 A 1 
HETATM 5 O O5 DMU . . . N 6 9.263 33.32 -1.811 1 98.06 ? O5 DMU 510 A 1 
HETATM 6 C C6 DMU . . . N 6 9.921 32.459 -2.742 1 98.42 ? C6 DMU 510 A 1 
HETATM 7 O O7 DMU . . . N 6 12.185 35.002 -0.336 1 98.94 ? O7 DMU 510 A 1 
HETATM 8 O O16 DMU . . . N 6 8.97 31.947 -3.676 1 97.94 ? O16 DMU 510 A 1 
HETATM 9 C C18 DMU . . . N 6 7.681 31.719 -3.104 1 96.18 ? C18 DMU 510 A 1 
HETATM 10 C C19 DMU . . . N 6 6.947 30.632 -3.893 1 95.88 ? C19 DMU 510 A 1 
HETATM 11 C C22 DMU . . . N 6 5.75 30.12 -3.089 1 94.83 ? C22 DMU 510 A 1 
HETATM 12 C C25 DMU . . . N 6 6.135 29.927 -1.62 1 95.4 ? C25 DMU 510 A 1 
HETATM 13 C C28 DMU . . . N 6 5.1 30.608 -0.722 1 94.06 ? C28 DMU 510 A 1 
HETATM 14 C C31 DMU . . . N 6 4.804 29.716 0.485 1 94.79 ? C31 DMU 510 A 1 
HETATM 15 C C34 DMU . . . N 6 3.663 30.335 1.294 1 93.57 ? C34 DMU 510 A 1 
HETATM 16 C C37 DMU . . . N 6 2.587 29.28 1.554 1 94.57 ? C37 DMU 510 A 1 
HETATM 17 C C40 DMU . . . N 6 1.293 29.976 1.98 1 93.48 ? C40 DMU 510 A 1 
HETATM 18 C C43 DMU . . . N 6 0.099 29.065 1.688 1 94.64 ? C43 DMU 510 A 1 
HETATM 19 O O49 DMU . . . N 6 11.668 32.417 -4.413 1 97.78 ? O49 DMU 510 A 1 
HETATM 20 O O55 DMU . . . N 6 12.97 34.609 -3.108 1 97.11 ? O55 DMU 510 A 1 
HETATM 21 C C57 DMU . . . N 6 9.281 34.744 0.129 1 98.43 ? C57 DMU 510 A 1 
HETATM 22 O O61 DMU . . . N 6 9.094 34.121 1.402 1 97.42 ? O61 DMU 510 A 1 
HETATM 23 C C5 DMU . . . N 6 12.967 33.951 1.723 1 97.09 ? C5 DMU 510 A 1 
HETATM 24 C C7 DMU . . . N 6 13.665 35.211 2.253 1 97.25 ? C7 DMU 510 A 1 
HETATM 25 C C8 DMU . . . N 6 15.08 35.293 1.669 1 97.28 ? C8 DMU 510 A 1 
HETATM 26 C C9 DMU . . . N 6 14.985 35.281 0.141 1 98.91 ? C9 DMU 510 A 1 
HETATM 27 O O1 DMU . . . N 6 14.336 34.077 -0.274 1 99.46 ? O1 DMU 510 A 1 
HETATM 28 C C10 DMU . . . N 6 12.989 33.938 0.188 1 98.09 ? C10 DMU 510 A 1 
HETATM 29 O O2 DMU . . . N 6 15.708 36.502 2.102 1 97.41 ? O2 DMU 510 A 1 
HETATM 30 O O3 DMU . . . N 6 11.618 33.927 2.193 1 97.86 ? O3 DMU 510 A 1 
HETATM 31 O O4 DMU . . . N 6 13.742 35.146 3.678 1 95.86 ? O4 DMU 510 A 1 
HETATM 32 C C11 DMU . . . N 6 16.389 35.341 -0.462 1 98.56 ? C11 DMU 510 A 1 
HETATM 33 O O6 DMU . . . N 6 16.856 36.693 -0.442 1 99.8 ? O6 DMU 510 A 1 
#
_model_server_stats.io_time_ms              37 
_model_server_stats.parse_time_ms           14 
_model_server_stats.create_model_time_ms    9 
_model_server_stats.query_time_ms           305 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           33 
#