data_8OO1 # _model_server_result.job_id taqTtfpqOc30N4zpalMXcA _model_server_result.datetime_utc '2025-04-05 11:47:12' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8oo1 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"N","auth_seq_id":201}' # _entry.id 8OO1 # _exptl.entry_id 8OO1 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 482.562 _entity.id 6 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description DECYL-BETA-D-MALTOPYRANOSIDE _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 100.485 _cell.angle_gamma 90 _cell.entry_id 8OO1 _cell.length_a 86.25 _cell.length_b 116.82 _cell.length_c 94.3 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8OO1 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall 'P 2yb' _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 6 I N N ? 6 N N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 B SG CYS 26 B CYS 22 1_555 B SG CYS 100 B CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf2 D SG CYS 26 D CYS 22 1_555 D SG CYS 100 D CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? # _chem_comp.formula 'C22 H42 O11' _chem_comp.formula_weight 482.562 _chem_comp.id DMU _chem_comp.mon_nstd_flag . _chem_comp.name DECYL-BETA-D-MALTOPYRANOSIDE _chem_comp.type d-saccharide _chem_comp.pdbx_synonyms DECYLMALTOSIDE # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C40 C37 DMU sing 171 n n C40 C43 DMU sing 172 n n C37 C34 DMU sing 173 n n C34 C31 DMU sing 174 n n C31 C28 DMU sing 175 n n C28 C25 DMU sing 176 n n C22 C25 DMU sing 177 n n C22 C19 DMU sing 178 n n O61 C57 DMU sing 179 n n O4 C7 DMU sing 180 n n C18 C19 DMU sing 181 n n C18 O16 DMU sing 182 n n O5 C6 DMU sing 183 n n O5 C4 DMU sing 184 n n C57 C4 DMU sing 185 n n C6 O16 DMU sing 186 n n C6 C1 DMU sing 187 n n C7 C5 DMU sing 188 n n C7 C8 DMU sing 189 n n C4 C3 DMU sing 190 n n O1 C10 DMU sing 191 n n O1 C9 DMU sing 192 n n C10 C5 DMU sing 193 n n C10 O7 DMU sing 194 n n C5 O3 DMU sing 195 n n O49 C1 DMU sing 196 n n C8 C9 DMU sing 197 n n C8 O2 DMU sing 198 n n C1 C2 DMU sing 199 n n C11 C9 DMU sing 200 n n C11 O6 DMU sing 201 n n C3 O7 DMU sing 202 n n C3 C2 DMU sing 203 n n C2 O55 DMU sing 204 n n C1 H1 DMU sing 205 n n C2 H2 DMU sing 206 n n C3 H3 DMU sing 207 n n C4 H4 DMU sing 208 n n C6 H5 DMU sing 209 n n C18 H6 DMU sing 210 n n C18 H7 DMU sing 211 n n C19 H8 DMU sing 212 n n C19 H9 DMU sing 213 n n C22 H10 DMU sing 214 n n C22 H11 DMU sing 215 n n C25 H12 DMU sing 216 n n C25 H13 DMU sing 217 n n C28 H14 DMU sing 218 n n C28 H15 DMU sing 219 n n C31 H16 DMU sing 220 n n C31 H17 DMU sing 221 n n C34 H18 DMU sing 222 n n C34 H19 DMU sing 223 n n C37 H20 DMU sing 224 n n C37 H21 DMU sing 225 n n C40 H22 DMU sing 226 n n C40 H23 DMU sing 227 n n C43 H24 DMU sing 228 n n C43 H25 DMU sing 229 n n C43 H26 DMU sing 230 n n O49 H27 DMU sing 231 n n O55 H28 DMU sing 232 n n C57 H29 DMU sing 233 n n C57 H30 DMU sing 234 n n O61 H31 DMU sing 235 n n C5 H32 DMU sing 236 n n C7 H33 DMU sing 237 n n C8 H34 DMU sing 238 n n C9 H35 DMU sing 239 n n C10 H36 DMU sing 240 n n O2 H37 DMU sing 241 n n O3 H38 DMU sing 242 n n O4 H39 DMU sing 243 n n C11 H40 DMU sing 244 n n C11 H41 DMU sing 245 n n O6 H42 DMU sing 246 n n # _atom_sites.entry_id 8OO1 _atom_sites.fract_transf_matrix[1][1] 0.011594 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002146 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.00856 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010785 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 1PE A 1 501 550 1PE 1PE . F 4 BNG A 1 502 501 BNG BNG . G 4 BNG A 1 503 502 BNG BNG . H 5 URA A 1 504 450 URA URA . I 6 DMU B 1 201 470 DMU DMU . J 4 BNG C 1 501 501 BNG BNG . K 4 BNG C 1 502 502 BNG BNG . L 4 BNG C 1 503 503 BNG BNG . M 5 URA C 1 504 450 URA URA . N 6 DMU D 1 201 470 DMU DMU . O 3 1PE D 1 202 550 1PE 1PE . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 DMU . . . N 6 12.64 0.204 39.541 1 41.38 ? C1 DMU 201 D 1 HETATM 2 C C2 DMU . . . N 6 12.767 0.73 40.975 1 42.43 ? C2 DMU 201 D 1 HETATM 3 C C3 DMU . . . N 6 13.425 -0.325 41.875 1 42.53 ? C3 DMU 201 D 1 HETATM 4 C C4 DMU . . . N 6 14.737 -0.818 41.255 1 50.67 ? C4 DMU 201 D 1 HETATM 5 O O5 DMU . . . N 6 14.514 -1.245 39.91 1 69.18 ? O5 DMU 201 D 1 HETATM 6 C C6 DMU . . . N 6 14.03 -0.209 39.055 1 50.66 ? C6 DMU 201 D 1 HETATM 7 O O7 DMU . . . N 6 13.718 0.281 43.134 1 42.03 ? O7 DMU 201 D 1 HETATM 8 O O16 DMU . . . N 6 13.967 -0.686 37.71 1 44.69 ? O16 DMU 201 D 1 HETATM 9 C C18 DMU . . . N 6 14.847 -1.781 37.451 1 28.49 ? C18 DMU 201 D 1 HETATM 10 C C19 DMU . . . N 6 14.797 -2.148 35.967 1 29 ? C19 DMU 201 D 1 HETATM 11 C C22 DMU . . . N 6 15.551 -3.461 35.757 1 35.51 ? C22 DMU 201 D 1 HETATM 12 C C25 DMU . . . N 6 15.011 -4.185 34.523 1 40.85 ? C25 DMU 201 D 1 HETATM 13 C C28 DMU . . . N 6 15.565 -3.494 33.277 1 63.31 ? C28 DMU 201 D 1 HETATM 14 C C31 DMU . . . N 6 15.484 -4.432 32.073 1 58.81 ? C31 DMU 201 D 1 HETATM 15 C C34 DMU . . . N 6 16.339 -3.851 30.946 1 55.03 ? C34 DMU 201 D 1 HETATM 16 C C37 DMU . . . N 6 17.223 -4.952 30.361 1 48.7 ? C37 DMU 201 D 1 HETATM 17 C C40 DMU . . . N 6 18.351 -4.315 29.548 1 52.27 ? C40 DMU 201 D 1 HETATM 18 C C43 DMU . . . N 6 19.448 -5.352 29.303 1 50.86 ? C43 DMU 201 D 1 HETATM 19 O O49 DMU . . . N 6 12.119 1.234 38.698 1 44.75 ? O49 DMU 201 D 1 HETATM 20 O O55 DMU . . . N 6 11.467 1.044 41.485 1 52.76 ? O55 DMU 201 D 1 HETATM 21 C C57 DMU . . . N 6 15.283 -1.996 42.064 1 45.82 ? C57 DMU 201 D 1 HETATM 22 O O61 DMU . . . N 6 16.093 -2.817 41.22 1 33.22 ? O61 DMU 201 D 1 HETATM 23 C C5 DMU . . . N 6 12.187 0.949 44.858 1 66.17 ? C5 DMU 201 D 1 HETATM 24 C C7 DMU . . . N 6 13.193 2.033 45.262 1 59.76 ? C7 DMU 201 D 1 HETATM 25 C C8 DMU . . . N 6 14.265 1.441 46.187 1 72.02 ? C8 DMU 201 D 1 HETATM 26 C C9 DMU . . . N 6 14.885 0.188 45.557 1 45.96 ? C9 DMU 201 D 1 HETATM 27 O O1 DMU . . . N 6 13.854 -0.736 45.205 1 46.94 ? O1 DMU 201 D 1 HETATM 28 C C10 DMU . . . N 6 12.953 -0.215 44.231 1 47.78 ? C10 DMU 201 D 1 HETATM 29 O O2 DMU . . . N 6 15.293 2.413 46.391 1 61.74 ? O2 DMU 201 D 1 HETATM 30 O O3 DMU . . . N 6 11.265 1.483 43.906 1 96.32 ? O3 DMU 201 D 1 HETATM 31 O O4 DMU . . . N 6 12.506 3.084 45.943 1 67.89 ? O4 DMU 201 D 1 HETATM 32 C C11 DMU . . . N 6 15.843 -0.464 46.555 1 32.02 ? C11 DMU 201 D 1 HETATM 33 O O6 DMU . . . N 6 17.151 0.087 46.385 1 28.03 ? O6 DMU 201 D 1 # _model_server_stats.io_time_ms 30 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 255 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 33 #