data_8OOW # _model_server_result.job_id psOGYF7hfeCWBOD3Z6bS_A _model_server_result.datetime_utc '2025-01-10 13:32:33' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8oow # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"FA","auth_seq_id":501}' # _entry.id 8OOW # _exptl.entry_id 8OOW _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 12 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 94.71 _cell.angle_gamma 90 _cell.entry_id 8OOW _cell.length_a 130.92 _cell.length_b 195.646 _cell.length_c 133.443 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8OOW _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dodecameric _pdbx_struct_assembly.oligomeric_count 12 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,NA,OA,PA,QA,RA,SA,TA,UA,VA,WA,XA,YA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 O N N ? 3 U N N ? 3 V N N ? 3 Z N N ? 3 AA N N ? 3 DA N N ? 3 EA N N ? 3 FA N N ? 3 HA N N ? 3 IA N N ? 3 JA N N ? 3 MA N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OE1 GLU 131 A GLU 131 1_555 O MG MG . A MG 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.586 ? metalc ? metalc2 A OE2 GLU 331 A GLU 331 1_555 O MG MG . A MG 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.235 ? metalc ? metalc3 B OE1 GLU 131 B GLU 131 1_555 U MG MG . B MG 506 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.519 ? metalc ? metalc4 B OE2 GLU 331 B GLU 331 1_555 U MG MG . B MG 506 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.414 ? metalc ? metalc5 C OE1 GLU 131 C GLU 131 1_555 V MG MG . C MG 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.306 ? metalc ? metalc6 C OE2 GLU 331 C GLU 331 1_555 V MG MG . C MG 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.502 ? metalc ? metalc7 D OE1 GLU 131 D GLU 131 1_555 Z MG MG . D MG 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.438 ? metalc ? metalc8 D OE2 GLU 331 D GLU 331 1_555 Z MG MG . D MG 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.979 ? metalc ? metalc9 E OE1 GLU 131 E GLU 131 1_555 AA MG MG . E MG 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.429 ? metalc ? metalc10 E OE2 GLU 331 E GLU 331 1_555 AA MG MG . E MG 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.229 ? metalc ? metalc11 F OE1 GLU 131 F GLU 131 1_555 DA MG MG . F MG 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.637 ? metalc ? metalc12 F OE2 GLU 331 F GLU 331 1_555 DA MG MG . F MG 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.955 ? metalc ? metalc13 G OE1 GLU 131 G GLU 131 1_555 EA MG MG . G MG 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.984 ? metalc ? metalc14 G OE2 GLU 331 G GLU 331 1_555 EA MG MG . G MG 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.606 ? metalc ? metalc15 H OE2 GLU 331 H GLU 331 1_555 FA MG MG . H MG 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.728 ? metalc ? metalc16 I OE1 GLU 131 I GLU 131 1_555 HA MG MG . I MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.881 ? metalc ? metalc17 I OE2 GLU 331 I GLU 331 1_555 HA MG MG . I MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.229 ? metalc ? metalc18 J OE1 GLU 131 J GLU 131 1_555 IA MG MG . J MG 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.467 ? metalc ? metalc19 J OE2 GLU 331 J GLU 331 1_555 IA MG MG . J MG 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.024 ? metalc ? metalc20 K OE1 GLU 131 K GLU 131 1_555 JA MG MG . K MG 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.734 ? metalc ? metalc21 K OE2 GLU 331 K GLU 331 1_555 JA MG MG . K MG 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.302 ? metalc ? metalc22 L OE1 GLU 131 L GLU 131 1_555 MA MG MG . L MG 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.917 ? metalc ? metalc23 L OE2 GLU 331 L GLU 331 1_555 MA MG MG . L MG 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.255 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 8OOW _atom_sites.fract_transf_matrix[1][1] 0.007638 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000629 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.005111 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007519 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code M 2 EDO A 1 501 501 EDO EDO . N 2 EDO A 1 502 601 EDO EDO . O 3 MG A 1 503 10 MG MG . P 2 EDO B 1 501 501 EDO EDO . Q 2 EDO B 1 502 601 EDO EDO . R 2 EDO B 1 503 701 EDO EDO . S 2 EDO B 1 504 702 EDO EDO . T 2 EDO B 1 505 501 EDO EDO . U 3 MG B 1 506 7 MG MG . V 3 MG C 1 501 6 MG MG . W 2 EDO D 1 501 501 EDO EDO . X 2 EDO D 1 502 601 EDO EDO . Y 2 EDO D 1 503 701 EDO EDO . Z 3 MG D 1 504 8 MG MG . AA 3 MG E 1 501 12 MG MG . BA 4 GOL F 1 501 501 GOL GOL . CA 4 GOL F 1 502 701 GOL GOL . DA 3 MG F 1 503 2 MG MG . EA 3 MG G 1 501 3 MG MG . FA 3 MG H 1 501 5 MG MG . GA 2 EDO I 1 501 501 EDO EDO . HA 3 MG I 1 502 9 MG MG . IA 3 MG J 1 501 1 MG MG . JA 3 MG K 1 501 4 MG MG . KA 2 EDO L 1 501 501 EDO EDO . LA 2 EDO L 1 502 501 EDO EDO . MA 3 MG L 1 503 11 MG MG . NA 5 HOH A 1 601 118 HOH HOH . NA 5 HOH A 2 602 29 HOH HOH . NA 5 HOH A 3 603 117 HOH HOH . NA 5 HOH A 4 604 131 HOH HOH . NA 5 HOH A 5 605 133 HOH HOH . NA 5 HOH A 6 606 63 HOH HOH . NA 5 HOH A 7 607 113 HOH HOH . NA 5 HOH A 8 608 90 HOH HOH . OA 5 HOH B 1 601 122 HOH HOH . OA 5 HOH B 2 602 11 HOH HOH . OA 5 HOH B 3 603 98 HOH HOH . OA 5 HOH B 4 604 93 HOH HOH . OA 5 HOH B 5 605 102 HOH HOH . OA 5 HOH B 6 606 119 HOH HOH . OA 5 HOH B 7 607 92 HOH HOH . OA 5 HOH B 8 608 107 HOH HOH . PA 5 HOH C 1 601 130 HOH HOH . PA 5 HOH C 2 602 37 HOH HOH . PA 5 HOH C 3 603 103 HOH HOH . PA 5 HOH C 4 604 99 HOH HOH . PA 5 HOH C 5 605 108 HOH HOH . PA 5 HOH C 6 606 120 HOH HOH . PA 5 HOH C 7 607 121 HOH HOH . PA 5 HOH C 8 608 80 HOH HOH . QA 5 HOH D 1 601 123 HOH HOH . QA 5 HOH D 2 602 124 HOH HOH . QA 5 HOH D 3 603 97 HOH HOH . QA 5 HOH D 4 604 86 HOH HOH . QA 5 HOH D 5 605 88 HOH HOH . QA 5 HOH D 6 606 116 HOH HOH . QA 5 HOH D 7 607 83 HOH HOH . QA 5 HOH D 8 608 78 HOH HOH . RA 5 HOH E 1 601 82 HOH HOH . RA 5 HOH E 2 602 62 HOH HOH . RA 5 HOH E 3 603 134 HOH HOH . RA 5 HOH E 4 604 96 HOH HOH . SA 5 HOH F 1 601 115 HOH HOH . SA 5 HOH F 2 602 42 HOH HOH . SA 5 HOH F 3 603 81 HOH HOH . SA 5 HOH F 4 604 132 HOH HOH . SA 5 HOH F 5 605 114 HOH HOH . TA 5 HOH G 1 601 85 HOH HOH . TA 5 HOH G 2 602 87 HOH HOH . TA 5 HOH G 3 603 105 HOH HOH . TA 5 HOH G 4 604 56 HOH HOH . UA 5 HOH H 1 601 47 HOH HOH . UA 5 HOH H 2 602 100 HOH HOH . VA 5 HOH I 1 601 25 HOH HOH . VA 5 HOH I 2 602 104 HOH HOH . VA 5 HOH I 3 603 127 HOH HOH . VA 5 HOH I 4 604 94 HOH HOH . WA 5 HOH J 1 601 125 HOH HOH . WA 5 HOH J 2 602 19 HOH HOH . WA 5 HOH J 3 603 77 HOH HOH . WA 5 HOH J 4 604 126 HOH HOH . WA 5 HOH J 5 605 95 HOH HOH . WA 5 HOH J 6 606 110 HOH HOH . XA 5 HOH K 1 601 135 HOH HOH . XA 5 HOH K 2 602 76 HOH HOH . XA 5 HOH K 3 603 84 HOH HOH . XA 5 HOH K 4 604 109 HOH HOH . XA 5 HOH K 5 605 112 HOH HOH . XA 5 HOH K 6 606 111 HOH HOH . YA 5 HOH L 1 601 129 HOH HOH . YA 5 HOH L 2 602 128 HOH HOH . YA 5 HOH L 3 603 106 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id FA _atom_site.label_entity_id 3 _atom_site.Cartn_x -66.377 _atom_site.Cartn_y -7.43 _atom_site.Cartn_z 68.142 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 82.67 _atom_site.pdbx_formal_charge 2 _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 501 _atom_site.auth_asym_id H _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 79 _model_server_stats.parse_time_ms 19 _model_server_stats.create_model_time_ms 69 _model_server_stats.query_time_ms 293 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 1 #