data_8OPV # _model_server_result.job_id xcfMYePckTLra0o0mCGTHw _model_server_result.datetime_utc '2024-11-15 06:26:16' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8opv # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":806}' # _entry.id 8OPV # _exptl.entry_id 8OPV _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 228.243 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description RESVERATROL _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 110.556 _cell.angle_gamma 90 _cell.entry_id 8OPV _cell.length_a 249.689 _cell.length_b 134.68 _cell.length_c 119.48 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8OPV _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall 'C 2y' _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 I N N ? 4 J N N ? 4 P N N ? 4 Q N N # _chem_comp.formula 'C14 H12 O3' _chem_comp.formula_weight 228.243 _chem_comp.id STL _chem_comp.mon_nstd_flag . _chem_comp.name RESVERATROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 STL doub 307 n y C1 C6 STL sing 308 n y C1 O3 STL sing 309 n n C2 C3 STL sing 310 n y C2 H2 STL sing 311 n n C3 C4 STL doub 312 n y C3 O2 STL sing 313 n n C4 C5 STL sing 314 n y C4 H4 STL sing 315 n n C5 C6 STL doub 316 n y C5 C7 STL sing 317 n n C6 H6 STL sing 318 n n C7 C8 STL doub 319 e n C7 H7 STL sing 320 n n C8 C9 STL sing 321 n n C8 H8 STL sing 322 n n C9 C10 STL doub 323 n y C9 C14 STL sing 324 n y C10 C11 STL sing 325 n y C10 H10 STL sing 326 n n C11 C12 STL doub 327 n y C11 H11 STL sing 328 n n C12 C13 STL sing 329 n y C12 O1 STL sing 330 n n C13 C14 STL doub 331 n y C13 H13 STL sing 332 n n C14 H14 STL sing 333 n n O1 HO1 STL sing 334 n n O2 HO2 STL sing 335 n n O3 HO3 STL sing 336 n n # _atom_sites.entry_id 8OPV _atom_sites.fract_transf_matrix[1][1] 0.004005 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001502 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007425 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008939 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 SO4 A 1 801 4 SO4 SO4 . F 3 SO4 A 1 802 9 SO4 SO4 . G 3 SO4 A 1 803 12 SO4 SO4 . H 3 SO4 A 1 804 21 SO4 SO4 . I 4 STL A 1 805 1 STL STL . J 4 STL A 1 806 2 STL STL . K 5 GOL A 1 807 1 GOL GOL . L 3 SO4 B 1 801 3 SO4 SO4 . M 3 SO4 B 1 802 16 SO4 SO4 . N 3 SO4 B 1 803 17 SO4 SO4 . O 3 SO4 B 1 804 20 SO4 SO4 . P 4 STL B 1 805 3 STL STL . Q 4 STL B 1 806 4 STL STL . R 3 SO4 C 1 501 1 SO4 SO4 . S 3 SO4 C 1 502 6 SO4 SO4 . T 3 SO4 C 1 503 11 SO4 SO4 . U 3 SO4 C 1 504 13 SO4 SO4 . V 3 SO4 C 1 505 14 SO4 SO4 . W 3 SO4 C 1 506 22 SO4 SO4 . X 3 SO4 D 1 501 2 SO4 SO4 . Y 3 SO4 D 1 502 5 SO4 SO4 . Z 3 SO4 D 1 503 7 SO4 SO4 . AA 3 SO4 D 1 504 8 SO4 SO4 . BA 3 SO4 D 1 505 10 SO4 SO4 . CA 3 SO4 D 1 506 15 SO4 SO4 . DA 6 HOH A 1 901 122 HOH HOH . DA 6 HOH A 2 902 102 HOH HOH . DA 6 HOH A 3 903 18 HOH HOH . DA 6 HOH A 4 904 8 HOH HOH . DA 6 HOH A 5 905 34 HOH HOH . DA 6 HOH A 6 906 42 HOH HOH . DA 6 HOH A 7 907 41 HOH HOH . DA 6 HOH A 8 908 136 HOH HOH . DA 6 HOH A 9 909 161 HOH HOH . DA 6 HOH A 10 910 25 HOH HOH . DA 6 HOH A 11 911 131 HOH HOH . DA 6 HOH A 12 912 190 HOH HOH . DA 6 HOH A 13 913 181 HOH HOH . DA 6 HOH A 14 914 15 HOH HOH . DA 6 HOH A 15 915 79 HOH HOH . DA 6 HOH A 16 916 198 HOH HOH . DA 6 HOH A 17 917 67 HOH HOH . DA 6 HOH A 18 918 58 HOH HOH . DA 6 HOH A 19 919 92 HOH HOH . DA 6 HOH A 20 920 144 HOH HOH . DA 6 HOH A 21 921 163 HOH HOH . DA 6 HOH A 22 922 182 HOH HOH . DA 6 HOH A 23 923 208 HOH HOH . DA 6 HOH A 24 924 36 HOH HOH . DA 6 HOH A 25 925 205 HOH HOH . DA 6 HOH A 26 926 117 HOH HOH . DA 6 HOH A 27 927 53 HOH HOH . DA 6 HOH A 28 928 213 HOH HOH . DA 6 HOH A 29 929 214 HOH HOH . DA 6 HOH A 30 930 32 HOH HOH . DA 6 HOH A 31 931 68 HOH HOH . DA 6 HOH A 32 932 124 HOH HOH . DA 6 HOH A 33 933 187 HOH HOH . DA 6 HOH A 34 934 206 HOH HOH . DA 6 HOH A 35 935 196 HOH HOH . EA 6 HOH B 1 901 170 HOH HOH . EA 6 HOH B 2 902 94 HOH HOH . EA 6 HOH B 3 903 24 HOH HOH . EA 6 HOH B 4 904 135 HOH HOH . EA 6 HOH B 5 905 39 HOH HOH . EA 6 HOH B 6 906 203 HOH HOH . EA 6 HOH B 7 907 140 HOH HOH . EA 6 HOH B 8 908 149 HOH HOH . EA 6 HOH B 9 909 55 HOH HOH . EA 6 HOH B 10 910 7 HOH HOH . EA 6 HOH B 11 911 167 HOH HOH . EA 6 HOH B 12 912 104 HOH HOH . EA 6 HOH B 13 913 16 HOH HOH . EA 6 HOH B 14 914 155 HOH HOH . EA 6 HOH B 15 915 188 HOH HOH . EA 6 HOH B 16 916 166 HOH HOH . EA 6 HOH B 17 917 4 HOH HOH . EA 6 HOH B 18 918 126 HOH HOH . EA 6 HOH B 19 919 197 HOH HOH . EA 6 HOH B 20 920 21 HOH HOH . EA 6 HOH B 21 921 95 HOH HOH . EA 6 HOH B 22 922 48 HOH HOH . EA 6 HOH B 23 923 106 HOH HOH . EA 6 HOH B 24 924 186 HOH HOH . EA 6 HOH B 25 925 13 HOH HOH . EA 6 HOH B 26 926 107 HOH HOH . EA 6 HOH B 27 927 143 HOH HOH . EA 6 HOH B 28 928 129 HOH HOH . EA 6 HOH B 29 929 215 HOH HOH . EA 6 HOH B 30 930 113 HOH HOH . EA 6 HOH B 31 931 202 HOH HOH . EA 6 HOH B 32 932 87 HOH HOH . EA 6 HOH B 33 933 201 HOH HOH . EA 6 HOH B 34 934 5 HOH HOH . FA 6 HOH C 1 601 23 HOH HOH . FA 6 HOH C 2 602 99 HOH HOH . FA 6 HOH C 3 603 12 HOH HOH . FA 6 HOH C 4 604 169 HOH HOH . FA 6 HOH C 5 605 72 HOH HOH . FA 6 HOH C 6 606 3 HOH HOH . FA 6 HOH C 7 607 47 HOH HOH . FA 6 HOH C 8 608 98 HOH HOH . FA 6 HOH C 9 609 22 HOH HOH . FA 6 HOH C 10 610 132 HOH HOH . FA 6 HOH C 11 611 114 HOH HOH . FA 6 HOH C 12 612 148 HOH HOH . FA 6 HOH C 13 613 153 HOH HOH . FA 6 HOH C 14 614 19 HOH HOH . FA 6 HOH C 15 615 111 HOH HOH . FA 6 HOH C 16 616 156 HOH HOH . FA 6 HOH C 17 617 64 HOH HOH . FA 6 HOH C 18 618 40 HOH HOH . FA 6 HOH C 19 619 180 HOH HOH . FA 6 HOH C 20 620 38 HOH HOH . FA 6 HOH C 21 621 80 HOH HOH . FA 6 HOH C 22 622 157 HOH HOH . FA 6 HOH C 23 623 133 HOH HOH . FA 6 HOH C 24 624 37 HOH HOH . FA 6 HOH C 25 625 49 HOH HOH . FA 6 HOH C 26 626 209 HOH HOH . FA 6 HOH C 27 627 54 HOH HOH . FA 6 HOH C 28 628 184 HOH HOH . FA 6 HOH C 29 629 207 HOH HOH . FA 6 HOH C 30 630 110 HOH HOH . FA 6 HOH C 31 631 211 HOH HOH . FA 6 HOH C 32 632 162 HOH HOH . GA 6 HOH D 1 601 151 HOH HOH . GA 6 HOH D 2 602 27 HOH HOH . GA 6 HOH D 3 603 185 HOH HOH . GA 6 HOH D 4 604 6 HOH HOH . GA 6 HOH D 5 605 10 HOH HOH . GA 6 HOH D 6 606 204 HOH HOH . GA 6 HOH D 7 607 51 HOH HOH . GA 6 HOH D 8 608 172 HOH HOH . GA 6 HOH D 9 609 138 HOH HOH . GA 6 HOH D 10 610 142 HOH HOH . GA 6 HOH D 11 611 159 HOH HOH . GA 6 HOH D 12 612 152 HOH HOH . GA 6 HOH D 13 613 28 HOH HOH . GA 6 HOH D 14 614 158 HOH HOH . GA 6 HOH D 15 615 141 HOH HOH . GA 6 HOH D 16 616 194 HOH HOH . GA 6 HOH D 17 617 74 HOH HOH . GA 6 HOH D 18 618 93 HOH HOH . GA 6 HOH D 19 619 118 HOH HOH . GA 6 HOH D 20 620 171 HOH HOH . GA 6 HOH D 21 621 168 HOH HOH . GA 6 HOH D 22 622 173 HOH HOH . GA 6 HOH D 23 623 101 HOH HOH . GA 6 HOH D 24 624 35 HOH HOH . GA 6 HOH D 25 625 14 HOH HOH . GA 6 HOH D 26 626 50 HOH HOH . GA 6 HOH D 27 627 90 HOH HOH . GA 6 HOH D 28 628 212 HOH HOH . GA 6 HOH D 29 629 200 HOH HOH . GA 6 HOH D 30 630 109 HOH HOH . GA 6 HOH D 31 631 193 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 STL . . . J 4 -59.601 41.046 -37.34 1 73.41 ? C1 STL 806 A 1 HETATM 2 C C2 STL . . . J 4 -60.769 41.779 -37.419 1 74.83 ? C2 STL 806 A 1 HETATM 3 C C3 STL . . . J 4 -61.806 41.33 -38.179 1 81.48 ? C3 STL 806 A 1 HETATM 4 C C4 STL . . . J 4 -61.685 40.126 -38.879 1 79.67 ? C4 STL 806 A 1 HETATM 5 C C5 STL . . . J 4 -60.527 39.403 -38.797 1 73.18 ? C5 STL 806 A 1 HETATM 6 C C6 STL . . . J 4 -59.486 39.854 -38.033 1 71.44 ? C6 STL 806 A 1 HETATM 7 C C7 STL . . . J 4 -60.395 38.047 -39.58 1 72.69 ? C7 STL 806 A 1 HETATM 8 C C8 STL . . . J 4 -59.295 37.75 -40.248 1 78.46 ? C8 STL 806 A 1 HETATM 9 C C9 STL . . . J 4 -59.215 36.422 -40.988 1 82.29 ? C9 STL 806 A 1 HETATM 10 C C10 STL . . . J 4 -58.292 35.484 -40.62 1 76.31 ? C10 STL 806 A 1 HETATM 11 C C11 STL . . . J 4 -58.227 34.276 -41.296 1 72.21 ? C11 STL 806 A 1 HETATM 12 C C12 STL . . . J 4 -59.097 34.022 -42.335 1 80.87 ? C12 STL 806 A 1 HETATM 13 C C13 STL . . . J 4 -60.034 34.972 -42.703 1 76.75 ? C13 STL 806 A 1 HETATM 14 C C14 STL . . . J 4 -60.099 36.159 -42.043 1 72.62 ? C14 STL 806 A 1 HETATM 15 O O1 STL . . . J 4 -59.038 32.849 -42.994 1 79.54 ? O1 STL 806 A 1 HETATM 16 O O2 STL . . . J 4 -63.048 42.114 -38.261 1 94.02 ? O2 STL 806 A 1 HETATM 17 O O3 STL . . . J 4 -58.582 41.487 -36.594 1 67.85 ? O3 STL 806 A 1 # _model_server_stats.io_time_ms 54 _model_server_stats.parse_time_ms 39 _model_server_stats.create_model_time_ms 22 _model_server_stats.query_time_ms 281 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 17 #