data_8OPW
#
_model_server_result.job_id            6SsqoyE5-nHnGJVvF1FIoQ 
_model_server_result.datetime_utc      '2024-11-15 06:33:30' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8opw 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"GA","auth_seq_id":501}' 
#
_entry.id    8OPW 
#
_exptl.entry_id    8OPW 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              194.191 
_entity.id                          5 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            CAFFEINE 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          110.861 
_cell.angle_gamma         90 
_cell.entry_id            8OPW 
_cell.length_a            249.512 
_cell.length_b            134.5 
_cell.length_c            118.978 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8OPW 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    'C 2y' 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,NA,OA,PA,QA 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 5 O N N 
? 5 GA N N 
#
_chem_comp.formula           'C8 H10 N4 O2' 
_chem_comp.formula_weight    194.191 
_chem_comp.id                CFF 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              CAFFEINE 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     3,7-DIHYDRO-1,3,7-TRIMETHYL-1H-PURINE-2,6-DIONE 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N1 C2 CFF sing 70 n y 
N1 C10 CFF sing 71 n n 
N1 C6 CFF sing 72 n y 
C2 N3 CFF sing 73 n y 
C2 O11 CFF doub 74 n n 
C10 H101 CFF sing 75 n n 
C10 H102 CFF sing 76 n n 
C10 H103 CFF sing 77 n n 
C6 C5 CFF sing 78 n y 
C6 O13 CFF doub 79 n n 
N3 C12 CFF sing 80 n n 
N3 C4 CFF sing 81 n y 
C12 H121 CFF sing 82 n n 
C12 H122 CFF sing 83 n n 
C12 H123 CFF sing 84 n n 
C4 C5 CFF doub 85 n y 
C4 N9 CFF sing 86 n y 
C5 N7 CFF sing 87 n y 
N9 C8 CFF doub 88 n y 
N7 C8 CFF sing 89 n y 
N7 C14 CFF sing 90 n n 
C8 H81 CFF sing 91 n n 
C14 H141 CFF sing 92 n n 
C14 H142 CFF sing 93 n n 
C14 H143 CFF sing 94 n n 
#
_atom_sites.entry_id                     8OPW 
_atom_sites.fract_transf_matrix[1][1]    0.004008 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.001527 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.007435 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.008995 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 3 SO4 A 1 801 4 SO4 SO4 . 
F 3 SO4 A 1 802 6 SO4 SO4 . 
G 3 SO4 A 1 803 8 SO4 SO4 . 
H 3 SO4 A 1 804 19 SO4 SO4 . 
I 3 SO4 A 1 805 20 SO4 SO4 . 
J 3 SO4 A 1 806 22 SO4 SO4 . 
K 4 GOL A 1 807 8 GOL GOL . 
L 4 GOL A 1 808 12 GOL GOL . 
M 4 GOL A 1 809 13 GOL GOL . 
N 4 GOL A 1 810 14 GOL GOL . 
O 5 CFF B 1 801 501 CFF CFF . 
P 3 SO4 B 1 802 3 SO4 SO4 . 
Q 3 SO4 B 1 803 11 SO4 SO4 . 
R 3 SO4 B 1 804 13 SO4 SO4 . 
S 3 SO4 B 1 805 17 SO4 SO4 . 
T 3 SO4 B 1 806 18 SO4 SO4 . 
U 3 SO4 B 1 807 21 SO4 SO4 . 
V 3 SO4 B 1 808 23 SO4 SO4 . 
W 3 SO4 B 1 809 24 SO4 SO4 . 
X 4 GOL B 1 810 1 GOL GOL . 
Y 3 SO4 C 1 501 1 SO4 SO4 . 
Z 3 SO4 C 1 502 7 SO4 SO4 . 
AA 3 SO4 C 1 503 9 SO4 SO4 . 
BA 3 SO4 C 1 504 12 SO4 SO4 . 
CA 3 SO4 C 1 505 16 SO4 SO4 . 
DA 3 SO4 C 1 506 25 SO4 SO4 . 
EA 3 SO4 C 1 507 26 SO4 SO4 . 
FA 4 GOL C 1 508 11 GOL GOL . 
GA 5 CFF D 1 501 501 CFF CFF . 
HA 3 SO4 D 1 502 2 SO4 SO4 . 
IA 3 SO4 D 1 503 5 SO4 SO4 . 
JA 3 SO4 D 1 504 10 SO4 SO4 . 
KA 3 SO4 D 1 505 14 SO4 SO4 . 
LA 3 SO4 D 1 506 15 SO4 SO4 . 
MA 4 GOL D 1 507 7 GOL GOL . 
NA 6 HOH A 1 901 133 HOH HOH . 
NA 6 HOH A 2 902 178 HOH HOH . 
NA 6 HOH A 3 903 10 HOH HOH . 
NA 6 HOH A 4 904 234 HOH HOH . 
NA 6 HOH A 5 905 27 HOH HOH . 
NA 6 HOH A 6 906 85 HOH HOH . 
NA 6 HOH A 7 907 191 HOH HOH . 
NA 6 HOH A 8 908 238 HOH HOH . 
NA 6 HOH A 9 909 50 HOH HOH . 
NA 6 HOH A 10 910 114 HOH HOH . 
NA 6 HOH A 11 911 14 HOH HOH . 
NA 6 HOH A 12 912 92 HOH HOH . 
NA 6 HOH A 13 913 77 HOH HOH . 
NA 6 HOH A 14 914 93 HOH HOH . 
NA 6 HOH A 15 915 44 HOH HOH . 
NA 6 HOH A 16 916 58 HOH HOH . 
NA 6 HOH A 17 917 118 HOH HOH . 
NA 6 HOH A 18 918 13 HOH HOH . 
NA 6 HOH A 19 919 70 HOH HOH . 
NA 6 HOH A 20 920 38 HOH HOH . 
NA 6 HOH A 21 921 4 HOH HOH . 
NA 6 HOH A 22 922 180 HOH HOH . 
NA 6 HOH A 23 923 147 HOH HOH . 
NA 6 HOH A 24 924 200 HOH HOH . 
NA 6 HOH A 25 925 121 HOH HOH . 
NA 6 HOH A 26 926 9 HOH HOH . 
NA 6 HOH A 27 927 235 HOH HOH . 
NA 6 HOH A 28 928 152 HOH HOH . 
NA 6 HOH A 29 929 228 HOH HOH . 
NA 6 HOH A 30 930 231 HOH HOH . 
NA 6 HOH A 31 931 218 HOH HOH . 
NA 6 HOH A 32 932 164 HOH HOH . 
NA 6 HOH A 33 933 96 HOH HOH . 
NA 6 HOH A 34 934 52 HOH HOH . 
NA 6 HOH A 35 935 88 HOH HOH . 
NA 6 HOH A 36 936 100 HOH HOH . 
NA 6 HOH A 37 937 170 HOH HOH . 
NA 6 HOH A 38 938 35 HOH HOH . 
OA 6 HOH B 1 901 177 HOH HOH . 
OA 6 HOH B 2 902 53 HOH HOH . 
OA 6 HOH B 3 903 236 HOH HOH . 
OA 6 HOH B 4 904 46 HOH HOH . 
OA 6 HOH B 5 905 131 HOH HOH . 
OA 6 HOH B 6 906 105 HOH HOH . 
OA 6 HOH B 7 907 101 HOH HOH . 
OA 6 HOH B 8 908 183 HOH HOH . 
OA 6 HOH B 9 909 227 HOH HOH . 
OA 6 HOH B 10 910 104 HOH HOH . 
OA 6 HOH B 11 911 189 HOH HOH . 
OA 6 HOH B 12 912 62 HOH HOH . 
OA 6 HOH B 13 913 23 HOH HOH . 
OA 6 HOH B 14 914 107 HOH HOH . 
OA 6 HOH B 15 915 86 HOH HOH . 
OA 6 HOH B 16 916 168 HOH HOH . 
OA 6 HOH B 17 917 7 HOH HOH . 
OA 6 HOH B 18 918 11 HOH HOH . 
OA 6 HOH B 19 919 63 HOH HOH . 
OA 6 HOH B 20 920 90 HOH HOH . 
OA 6 HOH B 21 921 221 HOH HOH . 
OA 6 HOH B 22 922 166 HOH HOH . 
OA 6 HOH B 23 923 83 HOH HOH . 
OA 6 HOH B 24 924 230 HOH HOH . 
OA 6 HOH B 25 925 22 HOH HOH . 
OA 6 HOH B 26 926 194 HOH HOH . 
OA 6 HOH B 27 927 51 HOH HOH . 
OA 6 HOH B 28 928 135 HOH HOH . 
OA 6 HOH B 29 929 127 HOH HOH . 
OA 6 HOH B 30 930 87 HOH HOH . 
OA 6 HOH B 31 931 30 HOH HOH . 
OA 6 HOH B 32 932 55 HOH HOH . 
OA 6 HOH B 33 933 112 HOH HOH . 
OA 6 HOH B 34 934 165 HOH HOH . 
OA 6 HOH B 35 935 139 HOH HOH . 
OA 6 HOH B 36 936 61 HOH HOH . 
OA 6 HOH B 37 937 19 HOH HOH . 
OA 6 HOH B 38 938 172 HOH HOH . 
OA 6 HOH B 39 939 237 HOH HOH . 
OA 6 HOH B 40 940 233 HOH HOH . 
OA 6 HOH B 41 941 25 HOH HOH . 
OA 6 HOH B 42 942 57 HOH HOH . 
OA 6 HOH B 43 943 122 HOH HOH . 
OA 6 HOH B 44 944 84 HOH HOH . 
OA 6 HOH B 45 945 140 HOH HOH . 
OA 6 HOH B 46 946 217 HOH HOH . 
OA 6 HOH B 47 947 174 HOH HOH . 
OA 6 HOH B 48 948 155 HOH HOH . 
OA 6 HOH B 49 949 239 HOH HOH . 
OA 6 HOH B 50 950 197 HOH HOH . 
OA 6 HOH B 51 951 124 HOH HOH . 
PA 6 HOH C 1 601 134 HOH HOH . 
PA 6 HOH C 2 602 8 HOH HOH . 
PA 6 HOH C 3 603 149 HOH HOH . 
PA 6 HOH C 4 604 5 HOH HOH . 
PA 6 HOH C 5 605 56 HOH HOH . 
PA 6 HOH C 6 606 26 HOH HOH . 
PA 6 HOH C 7 607 229 HOH HOH . 
PA 6 HOH C 8 608 99 HOH HOH . 
PA 6 HOH C 9 609 109 HOH HOH . 
PA 6 HOH C 10 610 95 HOH HOH . 
PA 6 HOH C 11 611 142 HOH HOH . 
PA 6 HOH C 12 612 21 HOH HOH . 
PA 6 HOH C 13 613 150 HOH HOH . 
PA 6 HOH C 14 614 120 HOH HOH . 
PA 6 HOH C 15 615 37 HOH HOH . 
PA 6 HOH C 16 616 43 HOH HOH . 
PA 6 HOH C 17 617 128 HOH HOH . 
PA 6 HOH C 18 618 153 HOH HOH . 
PA 6 HOH C 19 619 129 HOH HOH . 
PA 6 HOH C 20 620 222 HOH HOH . 
PA 6 HOH C 21 621 199 HOH HOH . 
PA 6 HOH C 22 622 123 HOH HOH . 
PA 6 HOH C 23 623 125 HOH HOH . 
PA 6 HOH C 24 624 137 HOH HOH . 
PA 6 HOH C 25 625 215 HOH HOH . 
PA 6 HOH C 26 626 24 HOH HOH . 
PA 6 HOH C 27 627 2 HOH HOH . 
PA 6 HOH C 28 628 220 HOH HOH . 
PA 6 HOH C 29 629 198 HOH HOH . 
PA 6 HOH C 30 630 132 HOH HOH . 
PA 6 HOH C 31 631 49 HOH HOH . 
PA 6 HOH C 32 632 29 HOH HOH . 
PA 6 HOH C 33 633 119 HOH HOH . 
PA 6 HOH C 34 634 208 HOH HOH . 
PA 6 HOH C 35 635 72 HOH HOH . 
PA 6 HOH C 36 636 138 HOH HOH . 
PA 6 HOH C 37 637 186 HOH HOH . 
PA 6 HOH C 38 638 111 HOH HOH . 
PA 6 HOH C 39 639 116 HOH HOH . 
PA 6 HOH C 40 640 15 HOH HOH . 
PA 6 HOH C 41 641 136 HOH HOH . 
PA 6 HOH C 42 642 40 HOH HOH . 
PA 6 HOH C 43 643 196 HOH HOH . 
PA 6 HOH C 44 644 91 HOH HOH . 
PA 6 HOH C 45 645 68 HOH HOH . 
PA 6 HOH C 46 646 163 HOH HOH . 
PA 6 HOH C 47 647 16 HOH HOH . 
PA 6 HOH C 48 648 175 HOH HOH . 
PA 6 HOH C 49 649 206 HOH HOH . 
QA 6 HOH D 1 601 103 HOH HOH . 
QA 6 HOH D 2 602 204 HOH HOH . 
QA 6 HOH D 3 603 211 HOH HOH . 
QA 6 HOH D 4 604 17 HOH HOH . 
QA 6 HOH D 5 605 32 HOH HOH . 
QA 6 HOH D 6 606 41 HOH HOH . 
QA 6 HOH D 7 607 141 HOH HOH . 
QA 6 HOH D 8 608 34 HOH HOH . 
QA 6 HOH D 9 609 31 HOH HOH . 
QA 6 HOH D 10 610 20 HOH HOH . 
QA 6 HOH D 11 611 216 HOH HOH . 
QA 6 HOH D 12 612 3 HOH HOH . 
QA 6 HOH D 13 613 126 HOH HOH . 
QA 6 HOH D 14 614 148 HOH HOH . 
QA 6 HOH D 15 615 225 HOH HOH . 
QA 6 HOH D 16 616 102 HOH HOH . 
QA 6 HOH D 17 617 203 HOH HOH . 
QA 6 HOH D 18 618 158 HOH HOH . 
QA 6 HOH D 19 619 188 HOH HOH . 
QA 6 HOH D 20 620 106 HOH HOH . 
QA 6 HOH D 21 621 205 HOH HOH . 
QA 6 HOH D 22 622 47 HOH HOH . 
QA 6 HOH D 23 623 69 HOH HOH . 
QA 6 HOH D 24 624 173 HOH HOH . 
QA 6 HOH D 25 625 113 HOH HOH . 
QA 6 HOH D 26 626 33 HOH HOH . 
QA 6 HOH D 27 627 232 HOH HOH . 
QA 6 HOH D 28 628 207 HOH HOH . 
QA 6 HOH D 29 629 108 HOH HOH . 
QA 6 HOH D 30 630 181 HOH HOH . 
QA 6 HOH D 31 631 212 HOH HOH . 
QA 6 HOH D 32 632 224 HOH HOH . 
QA 6 HOH D 33 633 144 HOH HOH . 
QA 6 HOH D 34 634 76 HOH HOH . 
QA 6 HOH D 35 635 161 HOH HOH . 
QA 6 HOH D 36 636 48 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N1 CFF . . . GA 5 -27.763 12.929 -34.88 1 71.86 ? N1 CFF 501 D 1 
HETATM 2 C C2 CFF . . . GA 5 -28.031 14.143 -35.51 1 82 ? C2 CFF 501 D 1 
HETATM 3 C C10 CFF . . . GA 5 -28.262 11.72 -35.541 1 68.57 ? C10 CFF 501 D 1 
HETATM 4 C C6 CFF . . . GA 5 -27.052 12.76 -33.68 1 75.1 ? C6 CFF 501 D 1 
HETATM 5 N N3 CFF . . . GA 5 -27.537 15.295 -34.91 1 83.16 ? N3 CFF 501 D 1 
HETATM 6 O O11 CFF . . . GA 5 -28.684 14.194 -36.537 1 93.06 ? O11 CFF 501 D 1 
HETATM 7 C C12 CFF . . . GA 5 -27.787 16.588 -35.552 1 71.75 ? C12 CFF 501 D 1 
HETATM 8 C C4 CFF . . . GA 5 -26.829 15.2 -33.736 1 86.16 ? C4 CFF 501 D 1 
HETATM 9 C C5 CFF . . . GA 5 -26.589 13.999 -33.141 1 81.12 ? C5 CFF 501 D 1 
HETATM 10 N N9 CFF . . . GA 5 -26.295 16.231 -33.023 1 79.22 ? N9 CFF 501 D 1 
HETATM 11 O O13 CFF . . . GA 5 -26.895 11.644 -33.195 1 66.88 ? O13 CFF 501 D 1 
HETATM 12 N N7 CFF . . . GA 5 -25.867 14.295 -31.998 1 85.33 ? N7 CFF 501 D 1 
HETATM 13 C C8 CFF . . . GA 5 -25.727 15.64 -31.988 1 77.09 ? C8 CFF 501 D 1 
HETATM 14 C C14 CFF . . . GA 5 -25.357 13.361 -30.997 1 71.35 ? C14 CFF 501 D 1 
#
_model_server_stats.io_time_ms              43 
_model_server_stats.parse_time_ms           23 
_model_server_stats.create_model_time_ms    18 
_model_server_stats.query_time_ms           247 
_model_server_stats.encode_time_ms          7 
_model_server_stats.element_count           14 
#