data_8OQ2 # _model_server_result.job_id cK8EswLNBvP80WUOLNgIPA _model_server_result.datetime_utc '2024-11-14 20:21:06' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8oq2 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"V","auth_seq_id":407}' # _entry.id 8OQ2 # _exptl.entry_id 8OQ2 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 42.02 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'AZIDE ION' _entity.pdbx_number_of_molecules 14 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 8OQ2 _cell.length_a 132.265 _cell.length_b 132.265 _cell.length_c 302.952 _cell.Z_PDB 36 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8OQ2 _symmetry.cell_setting ? _symmetry.Int_Tables_number 169 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 61' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 software_defined_assembly 1 PISA dimeric 2 software_defined_assembly 2 PISA dimeric 2 software_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,G,H,I,J,K,L,M,N,O,AA,BA 1 1 C,F,P,Q,R,S,T,U,V,W,Z,CA,FA 2 1 D,X,DA 3 1 E,Y,EA 3 2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 5_664 y+1,-x+y+1,z-1/6 0.5 0.866025 0 -0.866025 0.5 0 0 0 1 66.1325 114.54485 -50.492 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 I N N ? 3 J N N ? 3 K N N ? 3 L N N ? 3 M N N ? 3 N N N ? 3 O N N ? 3 Q N N ? 3 R N N ? 3 S N N ? 3 T N N ? 3 U N N ? 3 V N N ? 3 W N N # _chem_comp.formula 'N3 -1' _chem_comp.formula_weight 42.02 _chem_comp.id AZI _chem_comp.mon_nstd_flag . _chem_comp.name 'AZIDE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 N2 AZI doub 70 n n N2 N3 AZI doub 71 n n # _atom_sites.entry_id 8OQ2 _atom_sites.fract_transf_matrix[1][1] 0.007561 _atom_sites.fract_transf_matrix[1][2] 0.004365 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.00873 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.003301 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 2 NAP A 1 401 402 NAP NAP . H 2 NAP B 1 401 401 NAP NAP . I 3 AZI B 1 402 402 AZI AZI . J 3 AZI B 1 403 403 AZI AZI . K 3 AZI B 1 404 404 AZI AZI . L 3 AZI B 1 405 405 AZI AZI . M 3 AZI B 1 406 406 AZI AZI . N 3 AZI B 1 407 407 AZI AZI . O 3 AZI B 1 408 408 AZI AZI . P 2 NAP C 1 401 401 NAP NAP . Q 3 AZI C 1 402 402 AZI AZI . R 3 AZI C 1 403 403 AZI AZI . S 3 AZI C 1 404 404 AZI AZI . T 3 AZI C 1 405 405 AZI AZI . U 3 AZI C 1 406 406 AZI AZI . V 3 AZI C 1 407 409 AZI AZI . W 3 AZI C 1 408 410 AZI AZI . X 2 NAP D 1 401 401 NAP NAP . Y 2 NAP E 1 401 402 NAP NAP . Z 2 NAP F 1 401 402 NAP NAP . AA 4 HOH A 1 501 84 HOH HOH . AA 4 HOH A 2 502 87 HOH HOH . AA 4 HOH A 3 503 93 HOH HOH . AA 4 HOH A 4 504 101 HOH HOH . AA 4 HOH A 5 505 127 HOH HOH . AA 4 HOH A 6 506 43 HOH HOH . AA 4 HOH A 7 507 48 HOH HOH . AA 4 HOH A 8 508 72 HOH HOH . AA 4 HOH A 9 509 42 HOH HOH . AA 4 HOH A 10 510 157 HOH HOH . AA 4 HOH A 11 511 71 HOH HOH . AA 4 HOH A 12 512 64 HOH HOH . AA 4 HOH A 13 513 124 HOH HOH . AA 4 HOH A 14 514 85 HOH HOH . AA 4 HOH A 15 515 61 HOH HOH . AA 4 HOH A 16 516 67 HOH HOH . AA 4 HOH A 17 517 10 HOH HOH . AA 4 HOH A 18 518 98 HOH HOH . AA 4 HOH A 19 519 83 HOH HOH . AA 4 HOH A 20 520 86 HOH HOH . AA 4 HOH A 21 521 106 HOH HOH . AA 4 HOH A 22 522 59 HOH HOH . AA 4 HOH A 23 523 39 HOH HOH . AA 4 HOH A 24 524 33 HOH HOH . AA 4 HOH A 25 525 68 HOH HOH . AA 4 HOH A 26 526 50 HOH HOH . AA 4 HOH A 27 527 37 HOH HOH . AA 4 HOH A 28 528 21 HOH HOH . AA 4 HOH A 29 529 75 HOH HOH . AA 4 HOH A 30 530 12 HOH HOH . AA 4 HOH A 31 531 176 HOH HOH . AA 4 HOH A 32 532 149 HOH HOH . AA 4 HOH A 33 533 146 HOH HOH . AA 4 HOH A 34 534 155 HOH HOH . AA 4 HOH A 35 535 147 HOH HOH . AA 4 HOH A 36 536 156 HOH HOH . BA 4 HOH B 1 501 141 HOH HOH . BA 4 HOH B 2 502 113 HOH HOH . BA 4 HOH B 3 503 132 HOH HOH . BA 4 HOH B 4 504 90 HOH HOH . BA 4 HOH B 5 505 77 HOH HOH . BA 4 HOH B 6 506 143 HOH HOH . BA 4 HOH B 7 507 57 HOH HOH . BA 4 HOH B 8 508 34 HOH HOH . BA 4 HOH B 9 509 91 HOH HOH . BA 4 HOH B 10 510 154 HOH HOH . BA 4 HOH B 11 511 56 HOH HOH . BA 4 HOH B 12 512 100 HOH HOH . BA 4 HOH B 13 513 63 HOH HOH . BA 4 HOH B 14 514 114 HOH HOH . BA 4 HOH B 15 515 62 HOH HOH . BA 4 HOH B 16 516 105 HOH HOH . BA 4 HOH B 17 517 14 HOH HOH . BA 4 HOH B 18 518 119 HOH HOH . BA 4 HOH B 19 519 134 HOH HOH . BA 4 HOH B 20 520 70 HOH HOH . BA 4 HOH B 21 521 46 HOH HOH . BA 4 HOH B 22 522 153 HOH HOH . BA 4 HOH B 23 523 163 HOH HOH . BA 4 HOH B 24 524 94 HOH HOH . BA 4 HOH B 25 525 31 HOH HOH . BA 4 HOH B 26 526 150 HOH HOH . BA 4 HOH B 27 527 160 HOH HOH . BA 4 HOH B 28 528 148 HOH HOH . BA 4 HOH B 29 529 159 HOH HOH . BA 4 HOH B 30 530 24 HOH HOH . CA 4 HOH C 1 501 170 HOH HOH . CA 4 HOH C 2 502 78 HOH HOH . CA 4 HOH C 3 503 35 HOH HOH . CA 4 HOH C 4 504 69 HOH HOH . CA 4 HOH C 5 505 20 HOH HOH . CA 4 HOH C 6 506 116 HOH HOH . CA 4 HOH C 7 507 36 HOH HOH . CA 4 HOH C 8 508 4 HOH HOH . CA 4 HOH C 9 509 92 HOH HOH . CA 4 HOH C 10 510 122 HOH HOH . CA 4 HOH C 11 511 97 HOH HOH . CA 4 HOH C 12 512 38 HOH HOH . CA 4 HOH C 13 513 126 HOH HOH . CA 4 HOH C 14 514 107 HOH HOH . CA 4 HOH C 15 515 52 HOH HOH . CA 4 HOH C 16 516 171 HOH HOH . CA 4 HOH C 17 517 121 HOH HOH . CA 4 HOH C 18 518 9 HOH HOH . CA 4 HOH C 19 519 60 HOH HOH . CA 4 HOH C 20 520 145 HOH HOH . CA 4 HOH C 21 521 151 HOH HOH . DA 4 HOH D 1 501 144 HOH HOH . DA 4 HOH D 2 502 104 HOH HOH . DA 4 HOH D 3 503 139 HOH HOH . DA 4 HOH D 4 504 29 HOH HOH . DA 4 HOH D 5 505 112 HOH HOH . DA 4 HOH D 6 506 79 HOH HOH . DA 4 HOH D 7 507 11 HOH HOH . DA 4 HOH D 8 508 131 HOH HOH . DA 4 HOH D 9 509 51 HOH HOH . DA 4 HOH D 10 510 96 HOH HOH . DA 4 HOH D 11 511 138 HOH HOH . DA 4 HOH D 12 512 165 HOH HOH . DA 4 HOH D 13 513 172 HOH HOH . EA 4 HOH E 1 501 120 HOH HOH . EA 4 HOH E 2 502 41 HOH HOH . EA 4 HOH E 3 503 25 HOH HOH . EA 4 HOH E 4 504 95 HOH HOH . EA 4 HOH E 5 505 167 HOH HOH . EA 4 HOH E 6 506 110 HOH HOH . EA 4 HOH E 7 507 136 HOH HOH . EA 4 HOH E 8 508 175 HOH HOH . EA 4 HOH E 9 509 89 HOH HOH . EA 4 HOH E 10 510 173 HOH HOH . EA 4 HOH E 11 511 180 HOH HOH . EA 4 HOH E 12 512 166 HOH HOH . EA 4 HOH E 13 513 164 HOH HOH . EA 4 HOH E 14 514 179 HOH HOH . EA 4 HOH E 15 515 174 HOH HOH . FA 4 HOH F 1 501 40 HOH HOH . FA 4 HOH F 2 502 19 HOH HOH . FA 4 HOH F 3 503 152 HOH HOH . FA 4 HOH F 4 504 129 HOH HOH . FA 4 HOH F 5 505 55 HOH HOH . FA 4 HOH F 6 506 169 HOH HOH . FA 4 HOH F 7 507 130 HOH HOH . FA 4 HOH F 8 508 8 HOH HOH . FA 4 HOH F 9 509 58 HOH HOH . FA 4 HOH F 10 510 177 HOH HOH . FA 4 HOH F 11 511 109 HOH HOH . FA 4 HOH F 12 512 49 HOH HOH . FA 4 HOH F 13 513 103 HOH HOH . FA 4 HOH F 14 514 47 HOH HOH . FA 4 HOH F 15 515 54 HOH HOH . FA 4 HOH F 16 516 82 HOH HOH . FA 4 HOH F 17 517 66 HOH HOH . FA 4 HOH F 18 518 30 HOH HOH . FA 4 HOH F 19 519 76 HOH HOH . FA 4 HOH F 20 520 26 HOH HOH . FA 4 HOH F 21 521 178 HOH HOH . FA 4 HOH F 22 522 18 HOH HOH . FA 4 HOH F 23 523 102 HOH HOH . FA 4 HOH F 24 524 168 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 AZI . . . V 3 72.852 93.998 -20.475 1 50.51 ? N1 AZI 407 C 1 HETATM 2 N N2 AZI . . . V 3 72.458 92.973 -20.1 1 48.31 ? N2 AZI 407 C 1 HETATM 3 N N3 AZI . . . V 3 72.063 91.949 -19.725 1 47.76 ? N3 AZI 407 C 1 # _model_server_stats.io_time_ms 25 _model_server_stats.parse_time_ms 16 _model_server_stats.create_model_time_ms 52 _model_server_stats.query_time_ms 446 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 3 #