data_8OQM
#
_model_server_result.job_id            RWqx5Lu161B9SBsjMQzc9Q 
_model_server_result.datetime_utc      '2024-11-23 02:11:06' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8oqm 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"N","auth_seq_id":804}' 
#
_entry.id    8OQM 
#
_exptl.entry_id    8OQM 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              460.48 
_entity.id                          5 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '6-[(6-azanyl-4-oxidanyl-naphthalen-2-yl)sulfonylamino]-4-oxidanyl-naphthalene-2-sulfonic acid' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          110.622 
_cell.angle_gamma         90 
_cell.entry_id            8OQM 
_cell.length_a            247.918 
_cell.length_b            134.911 
_cell.length_c            119.214 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8OQM 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    'C 2y' 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 5 I N N 
? 5 N N N 
#
_chem_comp.formula           'C20 H16 N2 O7 S2' 
_chem_comp.formula_weight    460.48 
_chem_comp.id                A1IDU 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '6-[(6-azanyl-4-oxidanyl-naphthalen-2-yl)sulfonylamino]-4-oxidanyl-naphthalene-2-sulfonic acid' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N1 C2 A1IDU sing 1 n n 
C2 C3 A1IDU doub 2 n y 
C3 C4 A1IDU sing 3 n y 
C4 C5 A1IDU doub 4 n y 
C5 C6 A1IDU sing 5 n y 
C6 C7 A1IDU doub 6 n y 
C7 C8 A1IDU sing 7 n y 
C8 C9 A1IDU doub 8 n y 
C9 O10 A1IDU sing 9 n n 
C7 S11 A1IDU sing 10 n n 
S11 N12 A1IDU sing 11 n n 
N12 C13 A1IDU sing 12 n n 
C13 C14 A1IDU doub 13 n y 
C14 C15 A1IDU sing 14 n y 
C15 C16 A1IDU doub 15 n y 
C16 C17 A1IDU sing 16 n y 
C17 C18 A1IDU doub 17 n y 
C18 C19 A1IDU sing 18 n y 
C19 C20 A1IDU doub 19 n y 
C20 O21 A1IDU sing 20 n n 
C18 S22 A1IDU sing 21 n n 
S22 O23 A1IDU sing 22 n n 
S22 O24 A1IDU doub 23 n n 
S22 O25 A1IDU doub 24 n n 
C16 C26 A1IDU sing 25 n y 
C26 C27 A1IDU doub 26 n y 
S11 O28 A1IDU doub 27 n n 
S11 O29 A1IDU doub 28 n n 
C5 C30 A1IDU sing 29 n y 
C30 C31 A1IDU doub 30 n y 
C31 C2 A1IDU sing 31 n y 
C30 C9 A1IDU sing 32 n y 
C27 C13 A1IDU sing 33 n y 
C26 C20 A1IDU sing 34 n y 
C6 H6 A1IDU sing 35 n n 
C3 H3 A1IDU sing 36 n n 
C4 H4 A1IDU sing 37 n n 
C14 H14 A1IDU sing 38 n n 
C15 H15 A1IDU sing 39 n n 
C17 H17 A1IDU sing 40 n n 
C19 H19 A1IDU sing 41 n n 
C27 H27 A1IDU sing 42 n n 
C31 H31 A1IDU sing 43 n n 
C8 H8 A1IDU sing 44 n n 
N1 H1A A1IDU sing 45 n n 
N1 H1B A1IDU sing 46 n n 
N12 H12 A1IDU sing 47 n n 
O10 H10 A1IDU sing 48 n n 
O21 H21 A1IDU sing 49 n n 
O23 H23 A1IDU sing 50 n n 
#
_atom_sites.entry_id                     8OQM 
_atom_sites.fract_transf_matrix[1][1]    0.004034 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.001518 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.007412 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.008963 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 3 SO4 A 1 801 1721 SO4 SO4 . 
F 3 SO4 A 1 802 1725 SO4 SO4 . 
G 4 GOL A 1 803 1728 GOL GOL . 
H 4 GOL A 1 804 2402 GOL GOL . 
I 5 A1IDU A 1 805 2403 A1IDU 10D . 
J 3 SO4 A 1 806 6 SO4 SO4 . 
K 3 SO4 B 1 801 1721 SO4 SO4 . 
L 3 SO4 B 1 802 1722 SO4 SO4 . 
M 3 SO4 B 1 803 1728 SO4 SO4 . 
N 5 A1IDU B 1 804 2402 A1IDU 10D . 
O 3 SO4 B 1 805 2 SO4 SO4 . 
P 3 SO4 B 1 806 3 SO4 SO4 . 
Q 4 GOL B 1 807 1 GOL GOL . 
R 3 SO4 C 1 501 1723 SO4 SO4 . 
S 3 SO4 C 1 502 1404 SO4 SO4 . 
T 3 SO4 C 1 503 1405 SO4 SO4 . 
U 3 SO4 C 1 504 1406 SO4 SO4 . 
V 3 SO4 C 1 505 1409 SO4 SO4 . 
W 3 SO4 C 1 506 1410 SO4 SO4 . 
X 3 SO4 C 1 507 1 SO4 SO4 . 
Y 3 SO4 D 1 501 1404 SO4 SO4 . 
Z 3 SO4 D 1 502 1407 SO4 SO4 . 
AA 3 SO4 D 1 503 4 SO4 SO4 . 
BA 3 SO4 D 1 504 5 SO4 SO4 . 
CA 6 VWO D 1 505 3 VWO XXX . 
DA 7 HOH A 1 901 2120 HOH HOH . 
DA 7 HOH A 2 902 2046 HOH HOH . 
DA 7 HOH A 3 903 2013 HOH HOH . 
DA 7 HOH A 4 904 2178 HOH HOH . 
DA 7 HOH A 5 905 2219 HOH HOH . 
DA 7 HOH A 6 906 5 HOH HOH . 
DA 7 HOH A 7 907 20 HOH HOH . 
DA 7 HOH A 8 908 14 HOH HOH . 
DA 7 HOH A 9 909 15 HOH HOH . 
DA 7 HOH A 10 910 2297 HOH HOH . 
DA 7 HOH A 11 911 2315 HOH HOH . 
EA 7 HOH B 1 901 2013 HOH HOH . 
EA 7 HOH B 2 902 2006 HOH HOH . 
EA 7 HOH B 3 903 2212 HOH HOH . 
EA 7 HOH B 4 904 21 HOH HOH . 
EA 7 HOH B 5 905 2153 HOH HOH . 
EA 7 HOH B 6 906 16 HOH HOH . 
EA 7 HOH B 7 907 2225 HOH HOH . 
EA 7 HOH B 8 908 2115 HOH HOH . 
EA 7 HOH B 9 909 2310 HOH HOH . 
EA 7 HOH B 10 910 2057 HOH HOH . 
EA 7 HOH B 11 911 2062 HOH HOH . 
EA 7 HOH B 12 912 2 HOH HOH . 
EA 7 HOH B 13 913 6 HOH HOH . 
FA 7 HOH C 1 601 17 HOH HOH . 
FA 7 HOH C 2 602 2164 HOH HOH . 
FA 7 HOH C 3 603 2124 HOH HOH . 
FA 7 HOH C 4 604 2009 HOH HOH . 
FA 7 HOH C 5 605 2147 HOH HOH . 
FA 7 HOH C 6 606 2171 HOH HOH . 
FA 7 HOH C 7 607 7 HOH HOH . 
FA 7 HOH C 8 608 1 HOH HOH . 
FA 7 HOH C 9 609 2083 HOH HOH . 
FA 7 HOH C 10 610 22 HOH HOH . 
FA 7 HOH C 11 611 19 HOH HOH . 
FA 7 HOH C 12 612 2156 HOH HOH . 
GA 7 HOH D 1 601 4 HOH HOH . 
GA 7 HOH D 2 602 2132 HOH HOH . 
GA 7 HOH D 3 603 2092 HOH HOH . 
GA 7 HOH D 4 604 8 HOH HOH . 
GA 7 HOH D 5 605 2025 HOH HOH . 
GA 7 HOH D 6 606 2138 HOH HOH . 
GA 7 HOH D 7 607 2051 HOH HOH . 
GA 7 HOH D 8 608 2047 HOH HOH . 
GA 7 HOH D 9 609 2078 HOH HOH . 
GA 7 HOH D 10 610 2094 HOH HOH . 
GA 7 HOH D 11 611 12 HOH HOH . 
GA 7 HOH D 12 612 2037 HOH HOH . 
GA 7 HOH D 13 613 2079 HOH HOH . 
GA 7 HOH D 14 614 13 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C6 A1IDU . . . N 5 -59.303 29.549 41.369 1 159.18 ? C6 A1IDU 804 B 1 
HETATM 2 C C5 A1IDU . . . N 5 -60.61 29.037 41.545 1 161.95 ? C5 A1IDU 804 B 1 
HETATM 3 C C3 A1IDU . . . N 5 -62.272 27.32 41.204 1 113.71 ? C3 A1IDU 804 B 1 
HETATM 4 C C4 A1IDU . . . N 5 -61.01 27.794 41.006 1 126.22 ? C4 A1IDU 804 B 1 
HETATM 5 C C13 A1IDU . . . N 5 -55.746 29.603 40.342 1 141.06 ? C13 A1IDU 804 B 1 
HETATM 6 C C14 A1IDU . . . N 5 -54.446 29.983 40.014 1 115.05 ? C14 A1IDU 804 B 1 
HETATM 7 C C15 A1IDU . . . N 5 -53.812 29.462 38.926 1 96.83 ? C15 A1IDU 804 B 1 
HETATM 8 C C16 A1IDU . . . N 5 -54.458 28.519 38.095 1 112.12 ? C16 A1IDU 804 B 1 
HETATM 9 C C17 A1IDU . . . N 5 -53.803 27.909 36.999 1 101.81 ? C17 A1IDU 804 B 1 
HETATM 10 C C18 A1IDU . . . N 5 -54.441 26.952 36.261 1 98.64 ? C18 A1IDU 804 B 1 
HETATM 11 C C19 A1IDU . . . N 5 -55.739 26.567 36.563 1 101.09 ? C19 A1IDU 804 B 1 
HETATM 12 C C2 A1IDU . . . N 5 -63.219 28.043 41.945 1 132.48 ? C2 A1IDU 804 B 1 
HETATM 13 C C20 A1IDU . . . N 5 -56.405 27.136 37.614 1 99.71 ? C20 A1IDU 804 B 1 
HETATM 14 C C26 A1IDU . . . N 5 -55.786 28.126 38.414 1 123.73 ? C26 A1IDU 804 B 1 
HETATM 15 C C27 A1IDU . . . N 5 -56.411 28.692 39.552 1 138.59 ? C27 A1IDU 804 B 1 
HETATM 16 C C30 A1IDU . . . N 5 -61.552 29.789 42.299 1 160.29 ? C30 A1IDU 804 B 1 
HETATM 17 C C31 A1IDU . . . N 5 -62.856 29.268 42.486 1 150 ? C31 A1IDU 804 B 1 
HETATM 18 C C7 A1IDU . . . N 5 -58.958 30.749 41.92 1 158.17 ? C7 A1IDU 804 B 1 
HETATM 19 C C8 A1IDU . . . N 5 -59.868 31.494 42.658 1 157.35 ? C8 A1IDU 804 B 1 
HETATM 20 C C9 A1IDU . . . N 5 -61.141 31.03 42.848 1 151.04 ? C9 A1IDU 804 B 1 
HETATM 21 N N1 A1IDU . . . N 5 -64.486 27.538 42.137 1 110.94 ? N1 A1IDU 804 B 1 
HETATM 22 N N12 A1IDU . . . N 5 -56.343 30.068 41.556 1 145.19 ? N12 A1IDU 804 B 1 
HETATM 23 O O10 A1IDU . . . N 5 -62.077 31.711 43.561 1 141.77 ? O10 A1IDU 804 B 1 
HETATM 24 O O21 A1IDU . . . N 5 -57.68 26.805 37.948 1 98.63 ? O21 A1IDU 804 B 1 
HETATM 25 O O23 A1IDU . . . N 5 -52.419 25.469 35.574 1 74.11 ? O23 A1IDU 804 B 1 
HETATM 26 O O24 A1IDU . . . N 5 -54.488 25.197 34.36 1 87.38 ? O24 A1IDU 804 B 1 
HETATM 27 O O25 A1IDU . . . N 5 -53.146 27.189 34.04 1 123.5 ? O25 A1IDU 804 B 1 
HETATM 28 O O28 A1IDU . . . N 5 -57.263 32.099 40.498 1 162.01 ? O28 A1IDU 804 B 1 
HETATM 29 O O29 A1IDU . . . N 5 -56.936 32.001 42.948 1 159.46 ? O29 A1IDU 804 B 1 
HETATM 30 S S11 A1IDU . . . N 5 -57.32 31.365 41.725 1 180.05 ? S11 A1IDU 804 B 1 
HETATM 31 S S22 A1IDU . . . N 5 -53.576 26.15 34.944 1 105.48 ? S22 A1IDU 804 B 1 
#
_model_server_stats.io_time_ms              44 
_model_server_stats.parse_time_ms           25 
_model_server_stats.create_model_time_ms    16 
_model_server_stats.query_time_ms           231 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           31 
#