data_8OQN
#
_model_server_result.job_id            nkjcEMWEIQPdc9jPDHmxeg 
_model_server_result.datetime_utc      '2024-11-15 07:25:10' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8oqn 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"M","auth_seq_id":809}' 
#
_entry.id    8OQN 
#
_exptl.entry_id    8OQN 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              202.209 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '1-benzyl-1H-pyrazole-4-carboxylic acid' 
_entity.pdbx_number_of_molecules    11 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          109.698 
_cell.angle_gamma         90 
_cell.entry_id            8OQN 
_cell.length_a            247.309 
_cell.length_b            134.026 
_cell.length_c            116.408 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8OQN 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    'C 2y' 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,NA,OA,PA,QA 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 I N N 
? 4 J N N 
? 4 K N N 
? 4 L N N 
? 4 M N N 
? 4 U N N 
? 4 V N N 
? 4 W N N 
? 4 X N N 
? 4 Y N N 
? 4 Z N N 
#
_chem_comp.formula           'C11 H10 N2 O2' 
_chem_comp.formula_weight    202.209 
_chem_comp.id                W3U 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '1-benzyl-1H-pyrazole-4-carboxylic acid' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C C5 W3U doub 380 n y 
C C1 W3U sing 381 n y 
C5 C4 W3U sing 382 n y 
C1 C2 W3U doub 383 n y 
C4 C3 W3U doub 384 n y 
C2 C3 W3U sing 385 n y 
C3 C6 W3U sing 386 n n 
N1 C9 W3U doub 387 n y 
N1 N W3U sing 388 n y 
C9 C8 W3U sing 389 n y 
C6 N W3U sing 390 n n 
N C7 W3U sing 391 n y 
C8 C7 W3U doub 392 n y 
C8 C10 W3U sing 393 n n 
O C10 W3U doub 394 n n 
C10 O1 W3U sing 395 n n 
C7 H1 W3U sing 396 n n 
C9 H2 W3U sing 397 n n 
O1 H3 W3U sing 398 n n 
C1 H4 W3U sing 399 n n 
C5 H5 W3U sing 400 n n 
C6 H6 W3U sing 401 n n 
C6 H7 W3U sing 402 n n 
C4 H8 W3U sing 403 n n 
C2 H9 W3U sing 404 n n 
C H10 W3U sing 405 n n 
#
_atom_sites.entry_id                     8OQN 
_atom_sites.fract_transf_matrix[1][1]    0.004044 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.001448 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.007461 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.009124 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 3 SO4 A 1 801 1723 SO4 SO4 . 
F 3 SO4 A 1 802 1725 SO4 SO4 . 
G 3 SO4 A 1 803 1727 SO4 SO4 . 
H 3 SO4 A 1 804 1 SO4 SO4 . 
I 4 W3U A 1 805 1 W3U 053 . 
J 4 W3U A 1 806 2 W3U 053 . 
K 4 W3U A 1 807 3 W3U 053 . 
L 4 W3U A 1 808 5 W3U 053 . 
M 4 W3U A 1 809 12 W3U 053 . 
N 3 SO4 B 1 801 1722 SO4 SO4 . 
O 3 SO4 B 1 802 1723 SO4 SO4 . 
P 3 SO4 B 1 803 1725 SO4 SO4 . 
Q 3 SO4 B 1 804 1727 SO4 SO4 . 
R 3 SO4 B 1 805 1728 SO4 SO4 . 
S 3 SO4 B 1 806 1729 SO4 SO4 . 
T 3 SO4 B 1 807 2 SO4 SO4 . 
U 4 W3U B 1 808 6 W3U 053 . 
V 4 W3U B 1 809 7 W3U 053 . 
W 4 W3U B 1 810 8 W3U 053 . 
X 4 W3U B 1 811 9 W3U 053 . 
Y 4 W3U B 1 812 10 W3U 053 . 
Z 4 W3U B 1 813 11 W3U 053 . 
AA 3 SO4 C 1 501 1404 SO4 SO4 . 
BA 3 SO4 C 1 502 1405 SO4 SO4 . 
CA 3 SO4 C 1 503 1406 SO4 SO4 . 
DA 3 SO4 C 1 504 1407 SO4 SO4 . 
EA 3 SO4 C 1 505 1409 SO4 SO4 . 
FA 3 SO4 C 1 506 1410 SO4 SO4 . 
GA 3 SO4 C 1 507 1411 SO4 SO4 . 
HA 3 SO4 D 1 501 1404 SO4 SO4 . 
IA 3 SO4 D 1 502 1405 SO4 SO4 . 
JA 3 SO4 D 1 503 1406 SO4 SO4 . 
KA 3 SO4 D 1 504 1407 SO4 SO4 . 
LA 3 SO4 D 1 505 1408 SO4 SO4 . 
MA 3 SO4 D 1 506 1409 SO4 SO4 . 
NA 5 HOH A 1 901 80 HOH HOH . 
NA 5 HOH A 2 902 77 HOH HOH . 
NA 5 HOH A 3 903 87 HOH HOH . 
NA 5 HOH A 4 904 18 HOH HOH . 
NA 5 HOH A 5 905 186 HOH HOH . 
NA 5 HOH A 6 906 85 HOH HOH . 
NA 5 HOH A 7 907 24 HOH HOH . 
NA 5 HOH A 8 908 135 HOH HOH . 
NA 5 HOH A 9 909 92 HOH HOH . 
NA 5 HOH A 10 910 33 HOH HOH . 
NA 5 HOH A 11 911 21 HOH HOH . 
NA 5 HOH A 12 912 124 HOH HOH . 
NA 5 HOH A 13 913 49 HOH HOH . 
NA 5 HOH A 14 914 144 HOH HOH . 
NA 5 HOH A 15 915 30 HOH HOH . 
NA 5 HOH A 16 916 114 HOH HOH . 
NA 5 HOH A 17 917 99 HOH HOH . 
NA 5 HOH A 18 918 90 HOH HOH . 
NA 5 HOH A 19 919 101 HOH HOH . 
NA 5 HOH A 20 920 61 HOH HOH . 
NA 5 HOH A 21 921 31 HOH HOH . 
NA 5 HOH A 22 922 153 HOH HOH . 
NA 5 HOH A 23 923 178 HOH HOH . 
NA 5 HOH A 24 924 123 HOH HOH . 
NA 5 HOH A 25 925 113 HOH HOH . 
NA 5 HOH A 26 926 139 HOH HOH . 
NA 5 HOH A 27 927 147 HOH HOH . 
NA 5 HOH A 28 928 60 HOH HOH . 
NA 5 HOH A 29 929 107 HOH HOH . 
NA 5 HOH A 30 930 172 HOH HOH . 
NA 5 HOH A 31 931 171 HOH HOH . 
NA 5 HOH A 32 932 19 HOH HOH . 
NA 5 HOH A 33 933 69 HOH HOH . 
NA 5 HOH A 34 934 176 HOH HOH . 
NA 5 HOH A 35 935 167 HOH HOH . 
NA 5 HOH A 36 936 166 HOH HOH . 
NA 5 HOH A 37 937 47 HOH HOH . 
OA 5 HOH B 1 901 5 HOH HOH . 
OA 5 HOH B 2 902 185 HOH HOH . 
OA 5 HOH B 3 903 184 HOH HOH . 
OA 5 HOH B 4 904 151 HOH HOH . 
OA 5 HOH B 5 905 162 HOH HOH . 
OA 5 HOH B 6 906 3 HOH HOH . 
OA 5 HOH B 7 907 34 HOH HOH . 
OA 5 HOH B 8 908 75 HOH HOH . 
OA 5 HOH B 9 909 118 HOH HOH . 
OA 5 HOH B 10 910 68 HOH HOH . 
OA 5 HOH B 11 911 119 HOH HOH . 
OA 5 HOH B 12 912 117 HOH HOH . 
OA 5 HOH B 13 913 106 HOH HOH . 
OA 5 HOH B 14 914 20 HOH HOH . 
OA 5 HOH B 15 915 97 HOH HOH . 
OA 5 HOH B 16 916 39 HOH HOH . 
OA 5 HOH B 17 917 65 HOH HOH . 
OA 5 HOH B 18 918 164 HOH HOH . 
OA 5 HOH B 19 919 189 HOH HOH . 
OA 5 HOH B 20 920 156 HOH HOH . 
OA 5 HOH B 21 921 50 HOH HOH . 
OA 5 HOH B 22 922 112 HOH HOH . 
OA 5 HOH B 23 923 128 HOH HOH . 
OA 5 HOH B 24 924 108 HOH HOH . 
OA 5 HOH B 25 925 133 HOH HOH . 
OA 5 HOH B 26 926 56 HOH HOH . 
OA 5 HOH B 27 927 105 HOH HOH . 
OA 5 HOH B 28 928 15 HOH HOH . 
OA 5 HOH B 29 929 102 HOH HOH . 
OA 5 HOH B 30 930 157 HOH HOH . 
OA 5 HOH B 31 931 111 HOH HOH . 
OA 5 HOH B 32 932 148 HOH HOH . 
OA 5 HOH B 33 933 57 HOH HOH . 
OA 5 HOH B 34 934 100 HOH HOH . 
OA 5 HOH B 35 935 98 HOH HOH . 
OA 5 HOH B 36 936 71 HOH HOH . 
OA 5 HOH B 37 937 48 HOH HOH . 
OA 5 HOH B 38 938 165 HOH HOH . 
OA 5 HOH B 39 939 180 HOH HOH . 
OA 5 HOH B 40 940 160 HOH HOH . 
OA 5 HOH B 41 941 134 HOH HOH . 
OA 5 HOH B 42 942 121 HOH HOH . 
OA 5 HOH B 43 943 145 HOH HOH . 
OA 5 HOH B 44 944 191 HOH HOH . 
OA 5 HOH B 45 945 9 HOH HOH . 
OA 5 HOH B 46 946 161 HOH HOH . 
PA 5 HOH C 1 601 67 HOH HOH . 
PA 5 HOH C 2 602 146 HOH HOH . 
PA 5 HOH C 3 603 66 HOH HOH . 
PA 5 HOH C 4 604 35 HOH HOH . 
PA 5 HOH C 5 605 155 HOH HOH . 
PA 5 HOH C 6 606 93 HOH HOH . 
PA 5 HOH C 7 607 53 HOH HOH . 
PA 5 HOH C 8 608 150 HOH HOH . 
PA 5 HOH C 9 609 51 HOH HOH . 
PA 5 HOH C 10 610 2 HOH HOH . 
PA 5 HOH C 11 611 138 HOH HOH . 
PA 5 HOH C 12 612 38 HOH HOH . 
PA 5 HOH C 13 613 72 HOH HOH . 
PA 5 HOH C 14 614 82 HOH HOH . 
PA 5 HOH C 15 615 149 HOH HOH . 
PA 5 HOH C 16 616 23 HOH HOH . 
PA 5 HOH C 17 617 12 HOH HOH . 
PA 5 HOH C 18 618 142 HOH HOH . 
PA 5 HOH C 19 619 17 HOH HOH . 
PA 5 HOH C 20 620 29 HOH HOH . 
PA 5 HOH C 21 621 89 HOH HOH . 
PA 5 HOH C 22 622 45 HOH HOH . 
PA 5 HOH C 23 623 116 HOH HOH . 
PA 5 HOH C 24 624 81 HOH HOH . 
PA 5 HOH C 25 625 37 HOH HOH . 
PA 5 HOH C 26 626 11 HOH HOH . 
PA 5 HOH C 27 627 126 HOH HOH . 
PA 5 HOH C 28 628 74 HOH HOH . 
PA 5 HOH C 29 629 4 HOH HOH . 
PA 5 HOH C 30 630 54 HOH HOH . 
PA 5 HOH C 31 631 137 HOH HOH . 
PA 5 HOH C 32 632 86 HOH HOH . 
PA 5 HOH C 33 633 32 HOH HOH . 
PA 5 HOH C 34 634 16 HOH HOH . 
PA 5 HOH C 35 635 120 HOH HOH . 
PA 5 HOH C 36 636 59 HOH HOH . 
PA 5 HOH C 37 637 190 HOH HOH . 
PA 5 HOH C 38 638 175 HOH HOH . 
PA 5 HOH C 39 639 14 HOH HOH . 
PA 5 HOH C 40 640 52 HOH HOH . 
PA 5 HOH C 41 641 83 HOH HOH . 
PA 5 HOH C 42 642 91 HOH HOH . 
PA 5 HOH C 43 643 158 HOH HOH . 
PA 5 HOH C 44 644 44 HOH HOH . 
PA 5 HOH C 45 645 73 HOH HOH . 
PA 5 HOH C 46 646 26 HOH HOH . 
PA 5 HOH C 47 647 182 HOH HOH . 
PA 5 HOH C 48 648 46 HOH HOH . 
PA 5 HOH C 49 649 129 HOH HOH . 
PA 5 HOH C 50 650 110 HOH HOH . 
PA 5 HOH C 51 651 143 HOH HOH . 
PA 5 HOH C 52 652 22 HOH HOH . 
PA 5 HOH C 53 653 88 HOH HOH . 
PA 5 HOH C 54 654 25 HOH HOH . 
PA 5 HOH C 55 655 130 HOH HOH . 
PA 5 HOH C 56 656 152 HOH HOH . 
PA 5 HOH C 57 657 103 HOH HOH . 
QA 5 HOH D 1 601 187 HOH HOH . 
QA 5 HOH D 2 602 28 HOH HOH . 
QA 5 HOH D 3 603 132 HOH HOH . 
QA 5 HOH D 4 604 188 HOH HOH . 
QA 5 HOH D 5 605 141 HOH HOH . 
QA 5 HOH D 6 606 115 HOH HOH . 
QA 5 HOH D 7 607 8 HOH HOH . 
QA 5 HOH D 8 608 79 HOH HOH . 
QA 5 HOH D 9 609 58 HOH HOH . 
QA 5 HOH D 10 610 36 HOH HOH . 
QA 5 HOH D 11 611 104 HOH HOH . 
QA 5 HOH D 12 612 122 HOH HOH . 
QA 5 HOH D 13 613 13 HOH HOH . 
QA 5 HOH D 14 614 70 HOH HOH . 
QA 5 HOH D 15 615 169 HOH HOH . 
QA 5 HOH D 16 616 94 HOH HOH . 
QA 5 HOH D 17 617 10 HOH HOH . 
QA 5 HOH D 18 618 43 HOH HOH . 
QA 5 HOH D 19 619 1 HOH HOH . 
QA 5 HOH D 20 620 63 HOH HOH . 
QA 5 HOH D 21 621 109 HOH HOH . 
QA 5 HOH D 22 622 41 HOH HOH . 
QA 5 HOH D 23 623 174 HOH HOH . 
QA 5 HOH D 24 624 27 HOH HOH . 
QA 5 HOH D 25 625 173 HOH HOH . 
QA 5 HOH D 26 626 78 HOH HOH . 
QA 5 HOH D 27 627 42 HOH HOH . 
QA 5 HOH D 28 628 64 HOH HOH . 
QA 5 HOH D 29 629 140 HOH HOH . 
QA 5 HOH D 30 630 95 HOH HOH . 
QA 5 HOH D 31 631 159 HOH HOH . 
QA 5 HOH D 32 632 7 HOH HOH . 
QA 5 HOH D 33 633 136 HOH HOH . 
QA 5 HOH D 34 634 62 HOH HOH . 
QA 5 HOH D 35 635 127 HOH HOH . 
QA 5 HOH D 36 636 179 HOH HOH . 
QA 5 HOH D 37 637 76 HOH HOH . 
QA 5 HOH D 38 638 40 HOH HOH . 
QA 5 HOH D 39 639 6 HOH HOH . 
QA 5 HOH D 40 640 154 HOH HOH . 
QA 5 HOH D 41 641 183 HOH HOH . 
QA 5 HOH D 42 642 84 HOH HOH . 
QA 5 HOH D 43 643 96 HOH HOH . 
QA 5 HOH D 44 644 131 HOH HOH . 
QA 5 HOH D 45 645 170 HOH HOH . 
QA 5 HOH D 46 646 177 HOH HOH . 
QA 5 HOH D 47 647 125 HOH HOH . 
QA 5 HOH D 48 648 163 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N1 W3U . . . M 4 -54.245 26.304 -30.023 1 127.68 ? N1 W3U 809 A 1 
HETATM 2 C C7 W3U . . . M 4 -52.819 27.894 -30.712 1 111.1 ? C7 W3U 809 A 1 
HETATM 3 C C8 W3U . . . M 4 -53.251 27.215 -31.838 1 121.98 ? C8 W3U 809 A 1 
HETATM 4 C C9 W3U . . . M 4 -54.132 26.243 -31.337 1 125.05 ? C9 W3U 809 A 1 
HETATM 5 O O1 W3U . . . M 4 -53.439 26.667 -34.128 1 122.82 ? O1 W3U 809 A 1 
HETATM 6 C C1 W3U . . . M 4 -55.07 25.01 -26.203 1 115.67 ? C1 W3U 809 A 1 
HETATM 7 C C5 W3U . . . M 4 -52.725 24.808 -25.851 1 104.22 ? C5 W3U 809 A 1 
HETATM 8 C C6 W3U . . . M 4 -53.32 27.694 -28.243 1 108.57 ? C6 W3U 809 A 1 
HETATM 9 C C4 W3U . . . M 4 -52.503 25.88 -26.699 1 102.65 ? C4 W3U 809 A 1 
HETATM 10 C C3 W3U . . . M 4 -53.564 26.529 -27.313 1 106.06 ? C3 W3U 809 A 1 
HETATM 11 C C2 W3U . . . M 4 -54.851 26.082 -27.052 1 106.26 ? C2 W3U 809 A 1 
HETATM 12 C C10 W3U . . . M 4 -52.877 27.466 -33.258 1 124.19 ? C10 W3U 809 A 1 
HETATM 13 O O W3U . . . M 4 -52.102 28.364 -33.563 1 123.59 ? O W3U 809 A 1 
HETATM 14 N N W3U . . . M 4 -53.432 27.325 -29.659 1 122.81 ? N W3U 809 A 1 
HETATM 15 C C W3U . . . M 4 -54.007 24.373 -25.604 1 106.76 ? C W3U 809 A 1 
#
_model_server_stats.io_time_ms              48 
_model_server_stats.parse_time_ms           30 
_model_server_stats.create_model_time_ms    34 
_model_server_stats.query_time_ms           274 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           15 
#