data_8OQV # _model_server_result.job_id VsGybWhoNYhTHOJN1FPQcg _model_server_result.datetime_utc '2024-11-29 15:23:44' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8oqv # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"M","auth_seq_id":809}' # _entry.id 8OQV # _exptl.entry_id 8OQV _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 203.173 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '4-nitrobenzenesulfonic acid' _entity.pdbx_number_of_molecules 7 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 110.63 _cell.angle_gamma 90 _cell.entry_id 8OQV _cell.length_a 248.79 _cell.length_b 135.626 _cell.length_c 119.698 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8OQV _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall 'C 2y' _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 J N N ? 5 K N N ? 5 L N N ? 5 M N N ? 5 Q N N ? 5 R N N ? 5 S N N # _chem_comp.formula 'C6 H5 N O5 S' _chem_comp.formula_weight 203.173 _chem_comp.id VWI _chem_comp.mon_nstd_flag . _chem_comp.name '4-nitrobenzenesulfonic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 N VWI doub 393 n n O N VWI doub 394 n n N C5 VWI sing 395 n n C5 C VWI doub 396 n y C5 C4 VWI sing 397 n y C C1 VWI sing 398 n y C4 C3 VWI doub 399 n y C1 C2 VWI doub 400 n y C3 C2 VWI sing 401 n y C2 S VWI sing 402 n n O4 S VWI doub 403 n n S O3 VWI doub 404 n n S O2 VWI sing 405 n n C1 H1 VWI sing 406 n n C3 H2 VWI sing 407 n n C4 H3 VWI sing 408 n n C H4 VWI sing 409 n n O2 H5 VWI sing 410 n n # _atom_sites.entry_id 8OQV _atom_sites.fract_transf_matrix[1][1] 0.004019 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001513 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007373 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008927 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 GOL A 1 801 801 GOL GOL . F 4 SO4 A 1 802 6 SO4 SO4 . G 4 SO4 A 1 803 7 SO4 SO4 . H 4 SO4 A 1 804 9 SO4 SO4 . I 4 SO4 A 1 805 15 SO4 SO4 . J 5 VWI A 1 806 1 VWI 109 . K 5 VWI A 1 807 3 VWI 109 . L 5 VWI A 1 808 5 VWI 109 . M 5 VWI A 1 809 8 VWI 109 . N 3 GOL B 1 801 801 GOL GOL . O 4 SO4 B 1 802 3 SO4 SO4 . P 4 SO4 B 1 803 11 SO4 SO4 . Q 5 VWI B 1 804 4 VWI 109 . R 5 VWI B 1 805 7 VWI 109 . S 5 VWI B 1 806 10 VWI 109 . T 4 SO4 C 1 501 1 SO4 SO4 . U 4 SO4 C 1 502 4 SO4 SO4 . V 4 SO4 C 1 503 5 SO4 SO4 . W 4 SO4 C 1 504 10 SO4 SO4 . X 4 SO4 C 1 505 12 SO4 SO4 . Y 4 SO4 C 1 506 14 SO4 SO4 . Z 4 SO4 D 1 501 2 SO4 SO4 . AA 4 SO4 D 1 502 8 SO4 SO4 . BA 4 SO4 D 1 503 13 SO4 SO4 . CA 4 SO4 D 1 504 16 SO4 SO4 . DA 4 SO4 D 1 505 17 SO4 SO4 . EA 6 HOH A 1 901 34 HOH HOH . EA 6 HOH A 2 902 53 HOH HOH . EA 6 HOH A 3 903 11 HOH HOH . EA 6 HOH A 4 904 41 HOH HOH . EA 6 HOH A 5 905 30 HOH HOH . EA 6 HOH A 6 906 35 HOH HOH . EA 6 HOH A 7 907 45 HOH HOH . EA 6 HOH A 8 908 50 HOH HOH . EA 6 HOH A 9 909 52 HOH HOH . EA 6 HOH A 10 910 32 HOH HOH . EA 6 HOH A 11 911 6 HOH HOH . EA 6 HOH A 12 912 13 HOH HOH . EA 6 HOH A 13 913 7 HOH HOH . FA 6 HOH B 1 901 43 HOH HOH . FA 6 HOH B 2 902 49 HOH HOH . FA 6 HOH B 3 903 31 HOH HOH . FA 6 HOH B 4 904 36 HOH HOH . FA 6 HOH B 5 905 9 HOH HOH . FA 6 HOH B 6 906 37 HOH HOH . FA 6 HOH B 7 907 51 HOH HOH . FA 6 HOH B 8 908 33 HOH HOH . FA 6 HOH B 9 909 28 HOH HOH . FA 6 HOH B 10 910 12 HOH HOH . FA 6 HOH B 11 911 46 HOH HOH . FA 6 HOH B 12 912 22 HOH HOH . FA 6 HOH B 13 913 26 HOH HOH . FA 6 HOH B 14 914 24 HOH HOH . FA 6 HOH B 15 915 15 HOH HOH . GA 6 HOH C 1 601 10 HOH HOH . GA 6 HOH C 2 602 5 HOH HOH . GA 6 HOH C 3 603 42 HOH HOH . GA 6 HOH C 4 604 38 HOH HOH . GA 6 HOH C 5 605 1 HOH HOH . GA 6 HOH C 6 606 39 HOH HOH . GA 6 HOH C 7 607 8 HOH HOH . GA 6 HOH C 8 608 19 HOH HOH . GA 6 HOH C 9 609 20 HOH HOH . GA 6 HOH C 10 610 27 HOH HOH . GA 6 HOH C 11 611 44 HOH HOH . GA 6 HOH C 12 612 40 HOH HOH . HA 6 HOH D 1 601 47 HOH HOH . HA 6 HOH D 2 602 14 HOH HOH . HA 6 HOH D 3 603 17 HOH HOH . HA 6 HOH D 4 604 23 HOH HOH . HA 6 HOH D 5 605 48 HOH HOH . HA 6 HOH D 6 606 3 HOH HOH . HA 6 HOH D 7 607 18 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 VWI . . . M 5 -54.662 55.936 -38.411 1 115.42 ? C1 VWI 809 A 1 HETATM 2 C C2 VWI . . . M 5 -53.508 56.426 -37.82 1 124.62 ? C2 VWI 809 A 1 HETATM 3 C C3 VWI . . . M 5 -52.735 55.626 -36.995 1 118.38 ? C3 VWI 809 A 1 HETATM 4 C C4 VWI . . . M 5 -53.117 54.318 -36.759 1 121.94 ? C4 VWI 809 A 1 HETATM 5 C C5 VWI . . . M 5 -54.265 53.843 -37.356 1 116.73 ? C5 VWI 809 A 1 HETATM 6 O O1 VWI . . . M 5 -53.964 51.768 -36.383 1 112.31 ? O1 VWI 809 A 1 HETATM 7 N N VWI . . . M 5 -54.665 52.452 -37.114 1 120.45 ? N VWI 809 A 1 HETATM 8 C C VWI . . . M 5 -55.047 54.628 -38.177 1 105.73 ? C VWI 809 A 1 HETATM 9 O O VWI . . . M 5 -55.682 52.041 -37.653 1 109.83 ? O VWI 809 A 1 HETATM 10 O O2 VWI . . . M 5 -54.144 58.931 -37.835 1 137.57 ? O2 VWI 809 A 1 HETATM 11 O O3 VWI . . . M 5 -52.574 58.144 -39.51 1 153.73 ? O3 VWI 809 A 1 HETATM 12 O O4 VWI . . . M 5 -51.896 58.364 -37.211 1 152.21 ? O4 VWI 809 A 1 HETATM 13 S S VWI . . . M 5 -53.006 58.094 -38.132 1 172.73 ? S VWI 809 A 1 # _model_server_stats.io_time_ms 50 _model_server_stats.parse_time_ms 17 _model_server_stats.create_model_time_ms 18 _model_server_stats.query_time_ms 322 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 13 #