data_8OT8 # _model_server_result.job_id 76laY-7XISO2Nn-Nx298Yg _model_server_result.datetime_utc '2024-11-18 15:36:48' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8ot8 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"K","auth_seq_id":501}' # _entry.id 8OT8 # _exptl.entry_id 8OT8 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 785.55 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FLAVIN-ADENINE DINUCLEOTIDE' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8OT8 _cell.length_a 56.442 _cell.length_b 109.911 _cell.length_c 296.709 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8OT8 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 E N N ? 2 G N N ? 2 I N N ? 2 K N N # _chem_comp.formula 'C27 H33 N9 O15 P2' _chem_comp.formula_weight 785.55 _chem_comp.id FAD _chem_comp.mon_nstd_flag . _chem_comp.name 'FLAVIN-ADENINE DINUCLEOTIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PA O1A FAD doub 83 n n PA O2A FAD sing 84 n n PA O5B FAD sing 85 n n PA O3P FAD sing 86 n n O2A HOA2 FAD sing 87 n n O5B C5B FAD sing 88 n n C5B C4B FAD sing 89 n n C5B H51A FAD sing 90 n n C5B H52A FAD sing 91 n n C4B O4B FAD sing 92 n n C4B C3B FAD sing 93 n n C4B H4B FAD sing 94 n n O4B C1B FAD sing 95 n n C3B O3B FAD sing 96 n n C3B C2B FAD sing 97 n n C3B H3B FAD sing 98 n n O3B HO3A FAD sing 99 n n C2B O2B FAD sing 100 n n C2B C1B FAD sing 101 n n C2B H2B FAD sing 102 n n O2B HO2A FAD sing 103 n n C1B N9A FAD sing 104 n n C1B H1B FAD sing 105 n n N9A C8A FAD sing 106 n y N9A C4A FAD sing 107 n y C8A N7A FAD doub 108 n y C8A H8A FAD sing 109 n n N7A C5A FAD sing 110 n y C5A C6A FAD sing 111 n y C5A C4A FAD doub 112 n y C6A N6A FAD sing 113 n n C6A N1A FAD doub 114 n y N6A H61A FAD sing 115 n n N6A H62A FAD sing 116 n n N1A C2A FAD sing 117 n y C2A N3A FAD doub 118 n y C2A H2A FAD sing 119 n n N3A C4A FAD sing 120 n y N1 C2 FAD sing 121 n n N1 C10 FAD doub 122 n n C2 O2 FAD doub 123 n n C2 N3 FAD sing 124 n n N3 C4 FAD sing 125 n n N3 HN3 FAD sing 126 n n C4 O4 FAD doub 127 n n C4 C4X FAD sing 128 n n C4X N5 FAD doub 129 n n C4X C10 FAD sing 130 n n N5 C5X FAD sing 131 n n C5X C6 FAD doub 132 n y C5X C9A FAD sing 133 n y C6 C7 FAD sing 134 n y C6 H6 FAD sing 135 n n C7 C7M FAD sing 136 n n C7 C8 FAD doub 137 n y C7M HM71 FAD sing 138 n n C7M HM72 FAD sing 139 n n C7M HM73 FAD sing 140 n n C8 C8M FAD sing 141 n n C8 C9 FAD sing 142 n y C8M HM81 FAD sing 143 n n C8M HM82 FAD sing 144 n n C8M HM83 FAD sing 145 n n C9 C9A FAD doub 146 n y C9 H9 FAD sing 147 n n C9A N10 FAD sing 148 n n N10 C10 FAD sing 149 n n N10 C1' FAD sing 150 n n C1' C2' FAD sing 151 n n C1' "H1'1" FAD sing 152 n n C1' "H1'2" FAD sing 153 n n C2' O2' FAD sing 154 n n C2' C3' FAD sing 155 n n C2' H2' FAD sing 156 n n O2' HO2' FAD sing 157 n n C3' O3' FAD sing 158 n n C3' C4' FAD sing 159 n n C3' H3' FAD sing 160 n n O3' HO3' FAD sing 161 n n C4' O4' FAD sing 162 n n C4' C5' FAD sing 163 n n C4' H4' FAD sing 164 n n O4' HO4' FAD sing 165 n n C5' O5' FAD sing 166 n n C5' "H5'1" FAD sing 167 n n C5' "H5'2" FAD sing 168 n n O5' P FAD sing 169 n n P O1P FAD doub 170 n n P O2P FAD sing 171 n n P O3P FAD sing 172 n n O2P HOP2 FAD sing 173 n n # _atom_sites.entry_id 8OT8 _atom_sites.fract_transf_matrix[1][1] 0.017717 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009098 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00337 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 FAD A 1 501 501 FAD FAD . F 3 XUL A 1 502 502 XUL XUL . G 2 FAD B 1 501 501 FAD FAD . H 3 XUL B 1 502 502 XUL XUL . I 2 FAD C 1 501 501 FAD FAD . J 3 XUL C 1 502 503 XUL XUL . K 2 FAD D 1 501 501 FAD FAD . L 3 XUL D 1 502 502 XUL XUL . M 4 HOH A 1 601 1 HOH HOH . M 4 HOH A 2 602 2 HOH HOH . M 4 HOH A 3 603 18 HOH HOH . M 4 HOH A 4 604 26 HOH HOH . M 4 HOH A 5 605 75 HOH HOH . M 4 HOH A 6 606 3 HOH HOH . M 4 HOH A 7 607 50 HOH HOH . M 4 HOH A 8 608 4 HOH HOH . M 4 HOH A 9 609 48 HOH HOH . M 4 HOH A 10 610 46 HOH HOH . M 4 HOH A 11 611 63 HOH HOH . M 4 HOH A 12 612 68 HOH HOH . M 4 HOH A 13 613 95 HOH HOH . N 4 HOH B 1 601 16 HOH HOH . N 4 HOH B 2 602 64 HOH HOH . N 4 HOH B 3 603 43 HOH HOH . N 4 HOH B 4 604 72 HOH HOH . N 4 HOH B 5 605 62 HOH HOH . N 4 HOH B 6 606 45 HOH HOH . N 4 HOH B 7 607 35 HOH HOH . N 4 HOH B 8 608 40 HOH HOH . N 4 HOH B 9 609 89 HOH HOH . N 4 HOH B 10 610 66 HOH HOH . O 4 HOH C 1 601 11 HOH HOH . O 4 HOH C 2 602 7 HOH HOH . O 4 HOH C 3 603 33 HOH HOH . O 4 HOH C 4 604 22 HOH HOH . O 4 HOH C 5 605 14 HOH HOH . O 4 HOH C 6 606 41 HOH HOH . O 4 HOH C 7 607 59 HOH HOH . O 4 HOH C 8 608 60 HOH HOH . O 4 HOH C 9 609 78 HOH HOH . P 4 HOH D 1 601 100 HOH HOH . P 4 HOH D 2 602 32 HOH HOH . P 4 HOH D 3 603 25 HOH HOH . P 4 HOH D 4 604 44 HOH HOH . P 4 HOH D 5 605 53 HOH HOH . P 4 HOH D 6 606 6 HOH HOH . P 4 HOH D 7 607 23 HOH HOH . P 4 HOH D 8 608 69 HOH HOH . P 4 HOH D 9 609 99 HOH HOH . P 4 HOH D 10 610 98 HOH HOH . P 4 HOH D 11 611 101 HOH HOH . P 4 HOH D 12 612 105 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PA FAD . . . K 2 20.733 -70.65 24.397 1 66.88 ? PA FAD 501 D 1 HETATM 2 O O1A FAD . . . K 2 20.737 -71.611 25.528 1 68.11 ? O1A FAD 501 D 1 HETATM 3 O O2A FAD . . . K 2 21.114 -71.172 23.056 1 68.84 ? O2A FAD 501 D 1 HETATM 4 O O5B FAD . . . K 2 19.287 -70.001 24.341 1 68.6 ? O5B FAD 501 D 1 HETATM 5 C C5B FAD . . . K 2 18.809 -69.434 25.575 1 66.6 ? C5B FAD 501 D 1 HETATM 6 C C4B FAD . . . K 2 17.701 -68.467 25.254 1 62.26 ? C4B FAD 501 D 1 HETATM 7 O O4B FAD . . . K 2 18.253 -67.403 24.444 1 58.69 ? O4B FAD 501 D 1 HETATM 8 C C3B FAD . . . K 2 16.518 -69.035 24.451 1 61.17 ? C3B FAD 501 D 1 HETATM 9 O O3B FAD . . . K 2 15.303 -68.696 25.104 1 58.82 ? O3B FAD 501 D 1 HETATM 10 C C2B FAD . . . K 2 16.654 -68.382 23.069 1 60.32 ? C2B FAD 501 D 1 HETATM 11 O O2B FAD . . . K 2 15.425 -68.158 22.405 1 67.53 ? O2B FAD 501 D 1 HETATM 12 C C1B FAD . . . K 2 17.304 -67.066 23.464 1 59.1 ? C1B FAD 501 D 1 HETATM 13 N N9A FAD . . . K 2 17.983 -66.349 22.412 1 55.85 ? N9A FAD 501 D 1 HETATM 14 C C8A FAD . . . K 2 19.287 -66.477 21.973 1 57.75 ? C8A FAD 501 D 1 HETATM 15 N N7A FAD . . . K 2 19.593 -65.627 21.016 1 52.53 ? N7A FAD 501 D 1 HETATM 16 C C5A FAD . . . K 2 18.427 -64.888 20.836 1 56.5 ? C5A FAD 501 D 1 HETATM 17 C C6A FAD . . . K 2 18.097 -63.827 19.97 1 57.23 ? C6A FAD 501 D 1 HETATM 18 N N6A FAD . . . K 2 18.957 -63.289 19.109 1 60.93 ? N6A FAD 501 D 1 HETATM 19 N N1A FAD . . . K 2 16.841 -63.322 20.051 1 52.6 ? N1A FAD 501 D 1 HETATM 20 C C2A FAD . . . K 2 15.981 -63.862 20.929 1 48.88 ? C2A FAD 501 D 1 HETATM 21 N N3A FAD . . . K 2 16.173 -64.859 21.788 1 49.46 ? N3A FAD 501 D 1 HETATM 22 C C4A FAD . . . K 2 17.432 -65.328 21.69 1 56.06 ? C4A FAD 501 D 1 HETATM 23 N N1 FAD . . . K 2 24.909 -67.443 33.693 1 70.44 ? N1 FAD 501 D 1 HETATM 24 C C2 FAD . . . K 2 25.119 -66.42 34.521 1 65.96 ? C2 FAD 501 D 1 HETATM 25 O O2 FAD . . . K 2 24.175 -65.743 34.928 1 59.18 ? O2 FAD 501 D 1 HETATM 26 N N3 FAD . . . K 2 26.377 -66.063 34.903 1 71.3 ? N3 FAD 501 D 1 HETATM 27 C C4 FAD . . . K 2 27.493 -66.757 34.497 1 72.06 ? C4 FAD 501 D 1 HETATM 28 O O4 FAD . . . K 2 28.603 -66.406 34.855 1 63.8 ? O4 FAD 501 D 1 HETATM 29 C C4X FAD . . . K 2 27.308 -67.85 33.657 1 76.88 ? C4X FAD 501 D 1 HETATM 30 N N5 FAD . . . K 2 28.358 -68.526 33.266 1 77.67 ? N5 FAD 501 D 1 HETATM 31 C C5X FAD . . . K 2 28.137 -69.618 32.468 1 79.93 ? C5X FAD 501 D 1 HETATM 32 C C6 FAD . . . K 2 29.246 -70.386 32.068 1 82.23 ? C6 FAD 501 D 1 HETATM 33 C C7 FAD . . . K 2 29.11 -71.507 31.283 1 83.07 ? C7 FAD 501 D 1 HETATM 34 C C7M FAD . . . K 2 30.339 -72.297 30.906 1 78.65 ? C7M FAD 501 D 1 HETATM 35 C C8 FAD . . . K 2 27.797 -71.893 30.84 1 87.99 ? C8 FAD 501 D 1 HETATM 36 C C8M FAD . . . K 2 27.57 -73.118 29.988 1 83.36 ? C8M FAD 501 D 1 HETATM 37 C C9 FAD . . . K 2 26.711 -71.126 31.208 1 87.46 ? C9 FAD 501 D 1 HETATM 38 C C9A FAD . . . K 2 26.85 -69.992 32.03 1 82.83 ? C9A FAD 501 D 1 HETATM 39 N N10 FAD . . . K 2 25.762 -69.225 32.448 1 77.56 ? N10 FAD 501 D 1 HETATM 40 C C10 FAD . . . K 2 25.948 -68.141 33.285 1 76.94 ? C10 FAD 501 D 1 HETATM 41 C C1' FAD . . . K 2 24.402 -69.559 31.982 1 73.11 ? C1' FAD 501 D 1 HETATM 42 C C2' FAD . . . K 2 24.188 -69.035 30.562 1 68.58 ? C2' FAD 501 D 1 HETATM 43 O O2' FAD . . . K 2 24.947 -67.845 30.372 1 62.93 ? O2' FAD 501 D 1 HETATM 44 C C3' FAD . . . K 2 22.718 -68.754 30.246 1 71.26 ? C3' FAD 501 D 1 HETATM 45 O O3' FAD . . . K 2 22.016 -69.989 30.213 1 76.12 ? O3' FAD 501 D 1 HETATM 46 C C4' FAD . . . K 2 22.474 -68.021 28.925 1 79.88 ? C4' FAD 501 D 1 HETATM 47 O O4' FAD . . . K 2 21.173 -67.431 29.004 1 86.86 ? O4' FAD 501 D 1 HETATM 48 C C5' FAD . . . K 2 22.566 -68.923 27.708 1 78.15 ? C5' FAD 501 D 1 HETATM 49 O O5' FAD . . . K 2 22.964 -68.204 26.477 1 78.5 ? O5' FAD 501 D 1 HETATM 50 P P FAD . . . K 2 23.125 -69.011 25.087 1 72.34 ? P FAD 501 D 1 HETATM 51 O O1P FAD . . . K 2 23.798 -68.146 24.079 1 61.12 ? O1P FAD 501 D 1 HETATM 52 O O2P FAD . . . K 2 23.788 -70.302 25.423 1 77.57 ? O2P FAD 501 D 1 HETATM 53 O O3P FAD . . . K 2 21.595 -69.319 24.689 1 68.27 ? O3P FAD 501 D 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 29 _model_server_stats.query_time_ms 252 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 53 #