data_8OTV
#
_model_server_result.job_id            dJPS2NCaBRoCuRGeY_CYiA 
_model_server_result.datetime_utc      '2024-12-02 04:47:15' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8otv 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":302}' 
#
_entry.id    8OTV 
#
_exptl.entry_id    8OTV 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              78.133 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'DIMETHYL SULFOXIDE' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            8OTV 
_cell.length_a            51.25 
_cell.length_b            90.967 
_cell.length_c            108.099 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8OTV 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             D 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 G O HOH . A HOH 510 1_555 E MG MG . B MG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.668 ? 
metalc ? metalc2 B OE2 GLU 127 B GLU 126 1_555 E MG MG . B MG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.613 ? 
metalc ? metalc3 E MG MG . B MG 301 1_555 H O HOH . B HOH 413 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.412 ? 
metalc ? metalc4 E MG MG . B MG 301 1_555 H O HOH . B HOH 442 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.53 ? 
metalc ? metalc5 E MG MG . B MG 301 1_555 H O HOH . B HOH 455 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.553 ? 
#
_chem_comp.formula           'C2 H6 O S' 
_chem_comp.formula_weight    78.133 
_chem_comp.id                DMS 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'DIMETHYL SULFOXIDE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
S O DMS doub 83 n n 
S C1 DMS sing 84 n n 
S C2 DMS sing 85 n n 
C1 H11 DMS sing 86 n n 
C1 H12 DMS sing 87 n n 
C1 H13 DMS sing 88 n n 
C2 H21 DMS sing 89 n n 
C2 H22 DMS sing 90 n n 
C2 H23 DMS sing 91 n n 
#
_atom_sites.entry_id                     8OTV 
_atom_sites.fract_transf_matrix[1][1]    0.019512 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.010993 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.009251 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 W0O A 1 301 301 W0O 034 . 
D 3 DMS A 1 302 501 DMS DMS . 
E 4 MG B 1 301 2 MG MG . 
F 2 W0O B 1 302 401 W0O 034 . 
G 5 HOH A 1 401 189 HOH HOH . 
G 5 HOH A 2 402 51 HOH HOH . 
G 5 HOH A 3 403 85 HOH HOH . 
G 5 HOH A 4 404 158 HOH HOH . 
G 5 HOH A 5 405 172 HOH HOH . 
G 5 HOH A 6 406 69 HOH HOH . 
G 5 HOH A 7 407 144 HOH HOH . 
G 5 HOH A 8 408 84 HOH HOH . 
G 5 HOH A 9 409 70 HOH HOH . 
G 5 HOH A 10 410 43 HOH HOH . 
G 5 HOH A 11 411 147 HOH HOH . 
G 5 HOH A 12 412 193 HOH HOH . 
G 5 HOH A 13 413 175 HOH HOH . 
G 5 HOH A 14 414 18 HOH HOH . 
G 5 HOH A 15 415 159 HOH HOH . 
G 5 HOH A 16 416 73 HOH HOH . 
G 5 HOH A 17 417 110 HOH HOH . 
G 5 HOH A 18 418 106 HOH HOH . 
G 5 HOH A 19 419 77 HOH HOH . 
G 5 HOH A 20 420 94 HOH HOH . 
G 5 HOH A 21 421 50 HOH HOH . 
G 5 HOH A 22 422 64 HOH HOH . 
G 5 HOH A 23 423 89 HOH HOH . 
G 5 HOH A 24 424 87 HOH HOH . 
G 5 HOH A 25 425 68 HOH HOH . 
G 5 HOH A 26 426 16 HOH HOH . 
G 5 HOH A 27 427 148 HOH HOH . 
G 5 HOH A 28 428 66 HOH HOH . 
G 5 HOH A 29 429 34 HOH HOH . 
G 5 HOH A 30 430 3 HOH HOH . 
G 5 HOH A 31 431 132 HOH HOH . 
G 5 HOH A 32 432 81 HOH HOH . 
G 5 HOH A 33 433 142 HOH HOH . 
G 5 HOH A 34 434 119 HOH HOH . 
G 5 HOH A 35 435 116 HOH HOH . 
G 5 HOH A 36 436 63 HOH HOH . 
G 5 HOH A 37 437 100 HOH HOH . 
G 5 HOH A 38 438 205 HOH HOH . 
G 5 HOH A 39 439 47 HOH HOH . 
G 5 HOH A 40 440 12 HOH HOH . 
G 5 HOH A 41 441 13 HOH HOH . 
G 5 HOH A 42 442 48 HOH HOH . 
G 5 HOH A 43 443 125 HOH HOH . 
G 5 HOH A 44 444 75 HOH HOH . 
G 5 HOH A 45 445 114 HOH HOH . 
G 5 HOH A 46 446 153 HOH HOH . 
G 5 HOH A 47 447 160 HOH HOH . 
G 5 HOH A 48 448 31 HOH HOH . 
G 5 HOH A 49 449 52 HOH HOH . 
G 5 HOH A 50 450 207 HOH HOH . 
G 5 HOH A 51 451 67 HOH HOH . 
G 5 HOH A 52 452 40 HOH HOH . 
G 5 HOH A 53 453 99 HOH HOH . 
G 5 HOH A 54 454 74 HOH HOH . 
G 5 HOH A 55 455 161 HOH HOH . 
G 5 HOH A 56 456 115 HOH HOH . 
G 5 HOH A 57 457 185 HOH HOH . 
G 5 HOH A 58 458 6 HOH HOH . 
G 5 HOH A 59 459 9 HOH HOH . 
G 5 HOH A 60 460 54 HOH HOH . 
G 5 HOH A 61 461 53 HOH HOH . 
G 5 HOH A 62 462 90 HOH HOH . 
G 5 HOH A 63 463 117 HOH HOH . 
G 5 HOH A 64 464 41 HOH HOH . 
G 5 HOH A 65 465 139 HOH HOH . 
G 5 HOH A 66 466 49 HOH HOH . 
G 5 HOH A 67 467 93 HOH HOH . 
G 5 HOH A 68 468 105 HOH HOH . 
G 5 HOH A 69 469 136 HOH HOH . 
G 5 HOH A 70 470 128 HOH HOH . 
G 5 HOH A 71 471 176 HOH HOH . 
G 5 HOH A 72 472 91 HOH HOH . 
G 5 HOH A 73 473 107 HOH HOH . 
G 5 HOH A 74 474 86 HOH HOH . 
G 5 HOH A 75 475 62 HOH HOH . 
G 5 HOH A 76 476 157 HOH HOH . 
G 5 HOH A 77 477 57 HOH HOH . 
G 5 HOH A 78 478 134 HOH HOH . 
G 5 HOH A 79 479 195 HOH HOH . 
G 5 HOH A 80 480 80 HOH HOH . 
G 5 HOH A 81 481 141 HOH HOH . 
G 5 HOH A 82 482 45 HOH HOH . 
G 5 HOH A 83 483 37 HOH HOH . 
G 5 HOH A 84 484 214 HOH HOH . 
G 5 HOH A 85 485 111 HOH HOH . 
G 5 HOH A 86 486 122 HOH HOH . 
G 5 HOH A 87 487 151 HOH HOH . 
G 5 HOH A 88 488 102 HOH HOH . 
G 5 HOH A 89 489 170 HOH HOH . 
G 5 HOH A 90 490 186 HOH HOH . 
G 5 HOH A 91 491 168 HOH HOH . 
G 5 HOH A 92 492 137 HOH HOH . 
G 5 HOH A 93 493 215 HOH HOH . 
G 5 HOH A 94 494 2 HOH HOH . 
G 5 HOH A 95 495 118 HOH HOH . 
G 5 HOH A 96 496 23 HOH HOH . 
G 5 HOH A 97 497 127 HOH HOH . 
G 5 HOH A 98 498 11 HOH HOH . 
G 5 HOH A 99 499 113 HOH HOH . 
G 5 HOH A 100 500 206 HOH HOH . 
G 5 HOH A 101 501 184 HOH HOH . 
G 5 HOH A 102 502 182 HOH HOH . 
G 5 HOH A 103 503 138 HOH HOH . 
G 5 HOH A 104 504 166 HOH HOH . 
G 5 HOH A 105 505 208 HOH HOH . 
G 5 HOH A 106 506 179 HOH HOH . 
G 5 HOH A 107 507 178 HOH HOH . 
G 5 HOH A 108 508 211 HOH HOH . 
G 5 HOH A 109 509 135 HOH HOH . 
G 5 HOH A 110 510 38 HOH HOH . 
G 5 HOH A 111 511 194 HOH HOH . 
G 5 HOH A 112 512 163 HOH HOH . 
G 5 HOH A 113 513 171 HOH HOH . 
G 5 HOH A 114 514 22 HOH HOH . 
G 5 HOH A 115 515 174 HOH HOH . 
H 5 HOH B 1 401 95 HOH HOH . 
H 5 HOH B 2 402 61 HOH HOH . 
H 5 HOH B 3 403 167 HOH HOH . 
H 5 HOH B 4 404 35 HOH HOH . 
H 5 HOH B 5 405 30 HOH HOH . 
H 5 HOH B 6 406 120 HOH HOH . 
H 5 HOH B 7 407 203 HOH HOH . 
H 5 HOH B 8 408 32 HOH HOH . 
H 5 HOH B 9 409 212 HOH HOH . 
H 5 HOH B 10 410 28 HOH HOH . 
H 5 HOH B 11 411 150 HOH HOH . 
H 5 HOH B 12 412 216 HOH HOH . 
H 5 HOH B 13 413 39 HOH HOH . 
H 5 HOH B 14 414 21 HOH HOH . 
H 5 HOH B 15 415 92 HOH HOH . 
H 5 HOH B 16 416 7 HOH HOH . 
H 5 HOH B 17 417 55 HOH HOH . 
H 5 HOH B 18 418 42 HOH HOH . 
H 5 HOH B 19 419 123 HOH HOH . 
H 5 HOH B 20 420 10 HOH HOH . 
H 5 HOH B 21 421 29 HOH HOH . 
H 5 HOH B 22 422 165 HOH HOH . 
H 5 HOH B 23 423 44 HOH HOH . 
H 5 HOH B 24 424 4 HOH HOH . 
H 5 HOH B 25 425 140 HOH HOH . 
H 5 HOH B 26 426 188 HOH HOH . 
H 5 HOH B 27 427 14 HOH HOH . 
H 5 HOH B 28 428 20 HOH HOH . 
H 5 HOH B 29 429 58 HOH HOH . 
H 5 HOH B 30 430 8 HOH HOH . 
H 5 HOH B 31 431 15 HOH HOH . 
H 5 HOH B 32 432 173 HOH HOH . 
H 5 HOH B 33 433 130 HOH HOH . 
H 5 HOH B 34 434 180 HOH HOH . 
H 5 HOH B 35 435 162 HOH HOH . 
H 5 HOH B 36 436 201 HOH HOH . 
H 5 HOH B 37 437 126 HOH HOH . 
H 5 HOH B 38 438 124 HOH HOH . 
H 5 HOH B 39 439 204 HOH HOH . 
H 5 HOH B 40 440 24 HOH HOH . 
H 5 HOH B 41 441 200 HOH HOH . 
H 5 HOH B 42 442 33 HOH HOH . 
H 5 HOH B 43 443 103 HOH HOH . 
H 5 HOH B 44 444 191 HOH HOH . 
H 5 HOH B 45 445 213 HOH HOH . 
H 5 HOH B 46 446 197 HOH HOH . 
H 5 HOH B 47 447 143 HOH HOH . 
H 5 HOH B 48 448 60 HOH HOH . 
H 5 HOH B 49 449 78 HOH HOH . 
H 5 HOH B 50 450 192 HOH HOH . 
H 5 HOH B 51 451 96 HOH HOH . 
H 5 HOH B 52 452 210 HOH HOH . 
H 5 HOH B 53 453 177 HOH HOH . 
H 5 HOH B 54 454 27 HOH HOH . 
H 5 HOH B 55 455 5 HOH HOH . 
H 5 HOH B 56 456 164 HOH HOH . 
H 5 HOH B 57 457 88 HOH HOH . 
H 5 HOH B 58 458 26 HOH HOH . 
H 5 HOH B 59 459 46 HOH HOH . 
H 5 HOH B 60 460 65 HOH HOH . 
H 5 HOH B 61 461 196 HOH HOH . 
H 5 HOH B 62 462 19 HOH HOH . 
H 5 HOH B 63 463 82 HOH HOH . 
H 5 HOH B 64 464 71 HOH HOH . 
H 5 HOH B 65 465 181 HOH HOH . 
H 5 HOH B 66 466 152 HOH HOH . 
H 5 HOH B 67 467 72 HOH HOH . 
H 5 HOH B 68 468 108 HOH HOH . 
H 5 HOH B 69 469 59 HOH HOH . 
H 5 HOH B 70 470 112 HOH HOH . 
H 5 HOH B 71 471 17 HOH HOH . 
H 5 HOH B 72 472 199 HOH HOH . 
H 5 HOH B 73 473 36 HOH HOH . 
H 5 HOH B 74 474 25 HOH HOH . 
H 5 HOH B 75 475 190 HOH HOH . 
H 5 HOH B 76 476 76 HOH HOH . 
H 5 HOH B 77 477 56 HOH HOH . 
H 5 HOH B 78 478 155 HOH HOH . 
H 5 HOH B 79 479 133 HOH HOH . 
H 5 HOH B 80 480 1 HOH HOH . 
H 5 HOH B 81 481 97 HOH HOH . 
H 5 HOH B 82 482 154 HOH HOH . 
H 5 HOH B 83 483 101 HOH HOH . 
H 5 HOH B 84 484 145 HOH HOH . 
H 5 HOH B 85 485 209 HOH HOH . 
H 5 HOH B 86 486 183 HOH HOH . 
H 5 HOH B 87 487 98 HOH HOH . 
H 5 HOH B 88 488 104 HOH HOH . 
H 5 HOH B 89 489 156 HOH HOH . 
H 5 HOH B 90 490 169 HOH HOH . 
H 5 HOH B 91 491 129 HOH HOH . 
H 5 HOH B 92 492 109 HOH HOH . 
H 5 HOH B 93 493 149 HOH HOH . 
H 5 HOH B 94 494 79 HOH HOH . 
H 5 HOH B 95 495 83 HOH HOH . 
H 5 HOH B 96 496 131 HOH HOH . 
H 5 HOH B 97 497 202 HOH HOH . 
H 5 HOH B 98 498 146 HOH HOH . 
H 5 HOH B 99 499 198 HOH HOH . 
H 5 HOH B 100 500 121 HOH HOH . 
H 5 HOH B 101 501 187 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 S S DMS . . . D 3 -6.472 -7.937 -9.035 1 96.21 ? S DMS 302 A 1 
HETATM 2 O O DMS . . . D 3 -7.644 -8.488 -9.793 1 67.76 ? O DMS 302 A 1 
HETATM 3 C C1 DMS . . . D 3 -5.009 -8.034 -10.094 1 66.93 ? C1 DMS 302 A 1 
HETATM 4 C C2 DMS . . . D 3 -6.01 -9.034 -7.662 1 59.54 ? C2 DMS 302 A 1 
#
_model_server_stats.io_time_ms              12 
_model_server_stats.parse_time_ms           12 
_model_server_stats.create_model_time_ms    9 
_model_server_stats.query_time_ms           272 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           4 
#