data_8OU4 # _model_server_result.job_id tBJmz3b5bI7nogVJsIm3dg _model_server_result.datetime_utc '2025-07-03 14:27:30' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8ou4 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":202}' # _entry.id 8OU4 # _exptl.entry_id 8OU4 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 281.695 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 4-azanyl-~{N}-[(3~{S})-2,6-bis(oxidanylidene)piperidin-3-yl]-2-chloranyl-benzamide _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8OU4 _cell.length_a 56.511 _cell.length_b 59.542 _cell.length_c 88.185 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8OU4 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 ? monomeric 1 author_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,D,E,I 1 1 B,F,G,J 2 1 C,H,K 3 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 G N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 25 A CYS 24 1_555 D ZN ZN . A ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.305 ? metalc ? metalc2 A SG CYS 28 A CYS 27 1_555 D ZN ZN . A ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.298 ? metalc ? metalc3 A SG CYS 91 A CYS 90 1_555 D ZN ZN . A ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.364 ? metalc ? metalc4 A SG CYS 94 A CYS 93 1_555 D ZN ZN . A ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.22 ? metalc ? metalc5 B SG CYS 25 B CYS 24 1_555 F ZN ZN . B ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.446 ? metalc ? metalc6 B SG CYS 28 B CYS 27 1_555 F ZN ZN . B ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.171 ? metalc ? metalc7 B SG CYS 91 B CYS 90 1_555 F ZN ZN . B ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.273 ? metalc ? metalc8 B SG CYS 94 B CYS 93 1_555 F ZN ZN . B ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.285 ? metalc ? metalc9 C SG CYS 25 C CYS 24 1_555 H ZN ZN . C ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.402 ? metalc ? metalc10 C SG CYS 28 C CYS 27 1_555 H ZN ZN . C ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.298 ? metalc ? metalc11 C SG CYS 91 C CYS 90 1_555 H ZN ZN . C ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.33 ? metalc ? metalc12 C SG CYS 94 C CYS 93 1_555 H ZN ZN . C ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.147 ? # _chem_comp.formula 'C12 H12 Cl N3 O3' _chem_comp.formula_weight 281.695 _chem_comp.id W2F _chem_comp.mon_nstd_flag . _chem_comp.name 4-azanyl-~{N}-[(3~{S})-2,6-bis(oxidanylidene)piperidin-3-yl]-2-chloranyl-benzamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N3 C10 W2F sing 376 n n CL1 C8 W2F sing 377 n n C9 C10 W2F doub 378 n y C9 C8 W2F sing 379 n y C10 C11 W2F sing 380 n y C8 C7 W2F doub 381 n y O3 C2 W2F doub 382 n n C11 C12 W2F doub 383 n y C7 C12 W2F sing 384 n y C7 C6 W2F sing 385 n n C2 N1 W2F sing 386 n n C2 C1 W2F sing 387 n n N2 C6 W2F sing 388 n n N2 C1 W2F sing 389 n n N1 C3 W2F sing 390 n n C6 O1 W2F doub 391 n n C1 C5 W2F sing 392 n n C5 C4 W2F sing 393 n n C3 O2 W2F doub 394 n n C3 C4 W2F sing 395 n n N1 H2 W2F sing 396 n n N2 H7 W2F sing 397 n n C4 H4 W2F sing 398 n n C4 H3 W2F sing 399 n n C5 H5 W2F sing 400 n n C5 H6 W2F sing 401 n n C9 H8 W2F sing 402 n n C11 H9 W2F sing 403 n n C12 H10 W2F sing 404 n n C1 H1 W2F sing 405 n n N3 H12 W2F sing 406 n n N3 H11 W2F sing 407 n n # _atom_sites.entry_id 8OU4 _atom_sites.fract_transf_matrix[1][1] 0.017696 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016795 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01134 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 ZN A 1 201 150 ZN ZN . E 3 W2F A 1 202 201 W2F 585 . F 2 ZN B 1 201 150 ZN ZN . G 3 W2F B 1 202 201 W2F 585 . H 2 ZN C 1 201 150 ZN ZN . I 4 HOH A 1 301 13 HOH HOH . I 4 HOH A 2 302 36 HOH HOH . I 4 HOH A 3 303 7 HOH HOH . I 4 HOH A 4 304 9 HOH HOH . I 4 HOH A 5 305 28 HOH HOH . I 4 HOH A 6 306 17 HOH HOH . I 4 HOH A 7 307 4 HOH HOH . I 4 HOH A 8 308 25 HOH HOH . I 4 HOH A 9 309 14 HOH HOH . J 4 HOH B 1 301 20 HOH HOH . J 4 HOH B 2 302 24 HOH HOH . J 4 HOH B 3 303 3 HOH HOH . J 4 HOH B 4 304 1 HOH HOH . J 4 HOH B 5 305 23 HOH HOH . K 4 HOH C 1 301 19 HOH HOH . K 4 HOH C 2 302 34 HOH HOH . K 4 HOH C 3 303 16 HOH HOH . K 4 HOH C 4 304 38 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 W2F . . . E 3 23.671 16.035 -8.093 1 57.64 0 N1 W2F 202 A 1 HETATM 2 N N2 W2F . . . E 3 26.085 18.785 -8.159 1 64.62 0 N2 W2F 202 A 1 HETATM 3 C C3 W2F . . . E 3 22.558 16.523 -7.44 1 55.4 0 C3 W2F 202 A 1 HETATM 4 C C4 W2F . . . E 3 22.681 17.869 -6.8 1 55.48 0 C4 W2F 202 A 1 HETATM 5 C C5 W2F . . . E 3 23.747 18.748 -7.44 1 57.26 0 C5 W2F 202 A 1 HETATM 6 C C7 W2F . . . E 3 28.219 19.934 -8.369 1 78.97 0 C7 W2F 202 A 1 HETATM 7 C C9 W2F . . . E 3 29.015 20.877 -10.461 1 91.37 0 C9 W2F 202 A 1 HETATM 8 C C11 W2F . . . E 3 30.451 20.854 -8.531 1 86.87 0 C11 W2F 202 A 1 HETATM 9 C C12 W2F . . . E 3 29.456 20.241 -7.793 1 82.54 0 C12 W2F 202 A 1 HETATM 10 C C1 W2F . . . E 3 25.065 17.992 -7.497 1 59.56 0 C1 W2F 202 A 1 HETATM 11 C C2 W2F . . . E 3 24.908 16.639 -8.183 1 59.29 0 C2 W2F 202 A 1 HETATM 12 C C6 W2F . . . E 3 27.17 19.258 -7.531 1 69 0 C6 W2F 202 A 1 HETATM 13 O O1 W2F . . . E 3 27.327 19.133 -6.318 1 65.28 0 O1 W2F 202 A 1 HETATM 14 C C8 W2F . . . E 3 28.025 20.259 -9.707 1 87.45 0 C8 W2F 202 A 1 HETATM 15 C C10 W2F . . . E 3 30.243 21.179 -9.872 1 91.51 0 C10 W2F 202 A 1 HETATM 16 N N3 W2F . . . E 3 31.237 21.791 -10.608 1 94.97 0 N3 W2F 202 A 1 HETATM 17 CL CL1 W2F . . . E 3 26.522 19.917 -10.51 1 99.4 0 CL1 W2F 202 A 1 HETATM 18 O O2 W2F . . . E 3 21.537 15.866 -7.396 1 53.45 0 O2 W2F 202 A 1 HETATM 19 O O3 W2F . . . E 3 25.825 16.1 -8.773 1 60.32 0 O3 W2F 202 A 1 HETATM 20 H H2 W2F . . . E 3 23.581 15.255 -8.494 1 58.54 0 H2 W2F 202 A 1 HETATM 21 H H7 W2F . . . E 3 25.978 18.959 -9.001 1 66.05 0 H7 W2F 202 A 1 HETATM 22 H H4 W2F . . . E 3 21.81 18.317 -6.857 1 54.63 0 H4 W2F 202 A 1 HETATM 23 H H3 W2F . . . E 3 22.893 17.739 -5.85 1 54.33 0 H3 W2F 202 A 1 HETATM 24 H H5 W2F . . . E 3 23.47 18.993 -8.345 1 58.22 0 H5 W2F 202 A 1 HETATM 25 H H6 W2F . . . E 3 23.856 19.57 -6.916 1 56.68 0 H6 W2F 202 A 1 HETATM 26 H H8 W2F . . . E 3 28.86 21.09 -11.361 1 92.34 0 H8 W2F 202 A 1 HETATM 27 H H9 W2F . . . E 3 31.279 21.056 -8.129 1 88.03 0 H9 W2F 202 A 1 HETATM 28 H H10 W2F . . . E 3 29.615 20.03 -6.891 1 80.72 0 H10 W2F 202 A 1 HETATM 29 H H1 W2F . . . E 3 25.366 17.82 -6.563 1 58.93 0 H1 W2F 202 A 1 HETATM 30 H H12 W2F . . . E 3 31.097 21.991 -11.45 1 96.39 0 H12 W2F 202 A 1 HETATM 31 H H11 W2F . . . E 3 32.007 21.977 -10.231 1 95.83 0 H11 W2F 202 A 1 # _model_server_stats.io_time_ms 93 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 21 _model_server_stats.query_time_ms 321 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 31 #