data_8OU5 # _model_server_result.job_id z3AQaXCuiN-lnA5eRcY-IA _model_server_result.datetime_utc '2024-12-20 19:13:06' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8ou5 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":202}' # _entry.id 8OU5 # _exptl.entry_id 8OU5 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 315.248 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 4-azanyl-~{N}-[(3~{S})-2,6-bis(oxidanylidene)piperidin-3-yl]-2-(trifluoromethyl)benzamide _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8OU5 _cell.length_a 56.839 _cell.length_b 59.572 _cell.length_c 88.484 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8OU5 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 G N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 25 A CYS 24 1_555 D ZN ZN . A ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.345 ? metalc ? metalc2 A SG CYS 28 A CYS 27 1_555 D ZN ZN . A ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.397 ? metalc ? metalc3 A SG CYS 91 A CYS 90 1_555 D ZN ZN . A ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.334 ? metalc ? metalc4 A SG CYS 94 A CYS 93 1_555 D ZN ZN . A ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.251 ? metalc ? metalc5 B SG CYS 25 B CYS 24 1_555 F ZN ZN . B ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.471 ? metalc ? metalc6 B SG CYS 28 B CYS 27 1_555 F ZN ZN . B ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.262 ? metalc ? metalc7 B SG CYS 91 B CYS 90 1_555 F ZN ZN . B ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.272 ? metalc ? metalc8 B SG CYS 94 B CYS 93 1_555 F ZN ZN . B ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.293 ? metalc ? metalc9 C SG CYS 25 C CYS 24 1_555 H ZN ZN . C ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.435 ? metalc ? metalc10 C SG CYS 28 C CYS 27 1_555 H ZN ZN . C ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.352 ? metalc ? metalc11 C SG CYS 91 C CYS 90 1_555 H ZN ZN . C ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.311 ? metalc ? metalc12 C SG CYS 94 C CYS 93 1_555 H ZN ZN . C ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.211 ? # _chem_comp.formula 'C13 H12 F3 N3 O3' _chem_comp.formula_weight 315.248 _chem_comp.id W1X _chem_comp.mon_nstd_flag . _chem_comp.name 4-azanyl-~{N}-[(3~{S})-2,6-bis(oxidanylidene)piperidin-3-yl]-2-(trifluoromethyl)benzamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C11 C12 W1X doub 376 n y C11 C10 W1X sing 377 n y O2 C1 W1X doub 378 n n C12 C7 W1X sing 379 n y N3 C10 W1X sing 380 n n N1 C1 W1X sing 381 n n N1 C5 W1X sing 382 n n C1 C2 W1X sing 383 n n C10 C9 W1X doub 384 n y N2 C2 W1X sing 385 n n N2 C6 W1X sing 386 n n C5 O3 W1X doub 387 n n C5 C4 W1X sing 388 n n C3 C2 W1X sing 389 n n C3 C4 W1X sing 390 n n C7 C6 W1X sing 391 n n C7 C8 W1X doub 392 n y C6 O1 W1X doub 393 n n C9 C8 W1X sing 394 n y C8 C13 W1X sing 395 n n F3 C13 W1X sing 396 n n C13 F1 W1X sing 397 n n C13 F2 W1X sing 398 n n C4 H5 W1X sing 399 n n C4 H4 W1X sing 400 n n C3 H2 W1X sing 401 n n C3 H3 W1X sing 402 n n N2 H7 W1X sing 403 n n N1 H6 W1X sing 404 n n C11 H10 W1X sing 405 n n C9 H8 W1X sing 406 n n C2 H1 W1X sing 407 n n C12 H11 W1X sing 408 n n N3 HN3 W1X sing 409 n n N3 HN31 W1X sing 410 n n # _atom_sites.entry_id 8OU5 _atom_sites.fract_transf_matrix[1][1] 0.017594 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016786 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011301 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 ZN A 1 201 150 ZN ZN . E 3 W1X A 1 202 201 W1X 928 . F 2 ZN B 1 201 150 ZN ZN . G 3 W1X B 1 202 201 W1X 928 . H 2 ZN C 1 201 150 ZN ZN . I 4 HOH A 1 301 13 HOH HOH . I 4 HOH A 2 302 7 HOH HOH . I 4 HOH A 3 303 131 HOH HOH . I 4 HOH A 4 304 9 HOH HOH . I 4 HOH A 5 305 12 HOH HOH . I 4 HOH A 6 306 132 HOH HOH . I 4 HOH A 7 307 11 HOH HOH . I 4 HOH A 8 308 14 HOH HOH . I 4 HOH A 9 309 21 HOH HOH . I 4 HOH A 10 310 136 HOH HOH . J 4 HOH B 1 301 33 HOH HOH . J 4 HOH B 2 302 30 HOH HOH . J 4 HOH B 3 303 5 HOH HOH . J 4 HOH B 4 304 130 HOH HOH . J 4 HOH B 5 305 36 HOH HOH . J 4 HOH B 6 306 26 HOH HOH . J 4 HOH B 7 307 15 HOH HOH . J 4 HOH B 8 308 138 HOH HOH . J 4 HOH B 9 309 23 HOH HOH . J 4 HOH B 10 310 8 HOH HOH . J 4 HOH B 11 311 139 HOH HOH . K 4 HOH C 1 301 134 HOH HOH . K 4 HOH C 2 302 128 HOH HOH . K 4 HOH C 3 303 135 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C4 W1X . . . G 3 24.341 11.968 26.887 1 51.12 0 C4 W1X 202 B 1 HETATM 2 C C3 W1X . . . G 3 24.162 13.055 27.935 1 52.1 0 C3 W1X 202 B 1 HETATM 3 N N2 W1X . . . G 3 23.642 15.418 28.215 1 59.28 0 N2 W1X 202 B 1 HETATM 4 C C5 W1X . . . G 3 23.169 11.831 25.97 1 49.07 0 C5 W1X 202 B 1 HETATM 5 N N1 W1X . . . G 3 22.365 12.942 25.799 1 52.35 0 N1 W1X 202 B 1 HETATM 6 C C6 W1X . . . G 3 24.701 16.188 28.47 1 65.04 0 C6 W1X 202 B 1 HETATM 7 C C11 W1X . . . G 3 23.093 19.214 30.046 1 81.48 0 C11 W1X 202 B 1 HETATM 8 C C10 W1X . . . G 3 24.142 19.76 30.775 1 87.56 0 C10 W1X 202 B 1 HETATM 9 C C9 W1X . . . G 3 25.382 19.127 30.761 1 87.18 0 C9 W1X 202 B 1 HETATM 10 C C8 W1X . . . G 3 25.595 17.963 30.025 1 85.77 0 C8 W1X 202 B 1 HETATM 11 C C7 W1X . . . G 3 24.515 17.413 29.311 1 75.35 0 C7 W1X 202 B 1 HETATM 12 C C1 W1X . . . G 3 22.542 14.187 26.374 1 54.45 0 C1 W1X 202 B 1 HETATM 13 C C2 W1X . . . G 3 23.783 14.351 27.242 1 55.05 0 C2 W1X 202 B 1 HETATM 14 O O1 W1X . . . G 3 25.795 15.953 27.962 1 67.24 0 O1 W1X 202 B 1 HETATM 15 C C12 W1X . . . G 3 23.275 18.066 29.319 1 76.99 0 C12 W1X 202 B 1 HETATM 16 C C13 W1X . . . G 3 26.96 17.325 30.047 1 91.05 0 C13 W1X 202 B 1 HETATM 17 O O2 W1X . . . G 3 21.767 15.103 26.172 1 53.5 0 O2 W1X 202 B 1 HETATM 18 O O3 W1X . . . G 3 22.913 10.789 25.404 1 45.71 0 O3 W1X 202 B 1 HETATM 19 F F1 W1X . . . G 3 26.922 15.986 30.02 1 88.16 0 F1 W1X 202 B 1 HETATM 20 F F2 W1X . . . G 3 27.658 17.636 31.141 1 93.26 0 F2 W1X 202 B 1 HETATM 21 F F3 W1X . . . G 3 27.732 17.687 29.012 1 87.42 0 F3 W1X 202 B 1 HETATM 22 N N3 W1X . . . G 3 23.958 20.91 31.509 1 91.65 0 N3 W1X 202 B 1 HETATM 23 H H5 W1X . . . G 3 25.136 12.166 26.344 1 49.64 0 H5 W1X 202 B 1 HETATM 24 H H4 W1X . . . G 3 24.487 11.105 27.333 1 50.31 0 H4 W1X 202 B 1 HETATM 25 H H2 W1X . . . G 3 23.457 12.797 28.56 1 53.58 0 H2 W1X 202 B 1 HETATM 26 H H3 W1X . . . G 3 24.995 13.174 28.437 1 52.52 0 H3 W1X 202 B 1 HETATM 27 H H7 W1X . . . G 3 22.889 15.534 28.631 1 61.22 0 H7 W1X 202 B 1 HETATM 28 H H6 W1X . . . G 3 21.668 12.846 25.269 1 52.48 0 H6 W1X 202 B 1 HETATM 29 H H10 W1X . . . G 3 22.252 19.637 30.057 1 83.45 0 H10 W1X 202 B 1 HETATM 30 H H8 W1X . . . G 3 26.093 19.498 31.256 1 87.77 0 H8 W1X 202 B 1 HETATM 31 H H1 W1X . . . G 3 24.53 14.599 26.632 1 54.28 0 H1 W1X 202 B 1 HETATM 32 H H11 W1X . . . G 3 22.556 17.711 28.828 1 76.65 0 H11 W1X 202 B 1 HETATM 33 H HN3 W1X . . . G 3 23.175 21.304 31.514 1 92.27 0 HN3 W1X 202 B 1 HETATM 34 H HN31 W1X . . . G 3 24.626 21.246 31.968 1 91.88 0 HN31 W1X 202 B 1 # _model_server_stats.io_time_ms 21 _model_server_stats.parse_time_ms 27 _model_server_stats.create_model_time_ms 12 _model_server_stats.query_time_ms 296 _model_server_stats.encode_time_ms 9 _model_server_stats.element_count 34 #