data_8OU6 # _model_server_result.job_id c6CDDtOpsMuFnQUxOPSqhg _model_server_result.datetime_utc '2024-12-30 17:27:29' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8ou6 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":202}' # _entry.id 8OU6 # _exptl.entry_id 8OU6 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 261.276 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 4-azanyl-~{N}-[(3~{S})-2,6-bis(oxidanylidene)piperidin-3-yl]-2-methyl-benzamide _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8OU6 _cell.length_a 56.989 _cell.length_b 59.126 _cell.length_c 87.139 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8OU6 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 I N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 6 A CYS 24 1_555 D ZN ZN . A ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.28 ? metalc ? metalc2 A SG CYS 9 A CYS 27 1_555 D ZN ZN . A ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.334 ? metalc ? metalc3 A SG CYS 72 A CYS 90 1_555 D ZN ZN . A ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.337 ? metalc ? metalc4 A SG CYS 75 A CYS 93 1_555 D ZN ZN . A ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.266 ? metalc ? metalc5 B SG CYS 6 B CYS 24 1_555 H ZN ZN . B ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.338 ? metalc ? metalc6 B SG CYS 9 B CYS 27 1_555 H ZN ZN . B ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.349 ? metalc ? metalc7 B SG CYS 72 B CYS 90 1_555 H ZN ZN . B ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.334 ? metalc ? metalc8 B SG CYS 75 B CYS 93 1_555 H ZN ZN . B ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.342 ? metalc ? metalc9 C SG CYS 6 C CYS 24 1_555 L ZN ZN . C ZN 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.374 ? metalc ? metalc10 C SG CYS 9 C CYS 27 1_555 L ZN ZN . C ZN 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.351 ? metalc ? metalc11 C SG CYS 72 C CYS 90 1_555 L ZN ZN . C ZN 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.372 ? metalc ? metalc12 C SG CYS 75 C CYS 93 1_555 L ZN ZN . C ZN 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.318 ? # _chem_comp.formula 'C13 H15 N3 O3' _chem_comp.formula_weight 261.276 _chem_comp.id W26 _chem_comp.mon_nstd_flag . _chem_comp.name 4-azanyl-~{N}-[(3~{S})-2,6-bis(oxidanylidene)piperidin-3-yl]-2-methyl-benzamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C13 C12 W26 sing 380 n n N3 C10 W26 sing 381 n n C11 C10 W26 doub 382 n y C11 C12 W26 sing 383 n y C10 C9 W26 sing 384 n y C12 C7 W26 doub 385 n y O2 C5 W26 doub 386 n n C9 C8 W26 doub 387 n y C7 C8 W26 sing 388 n y C7 C6 W26 sing 389 n n N2 C6 W26 sing 390 n n N2 C1 W26 sing 391 n n N1 C5 W26 sing 392 n n N1 C4 W26 sing 393 n n C5 C1 W26 sing 394 n n C6 O3 W26 doub 395 n n C4 O1 W26 doub 396 n n C4 C3 W26 sing 397 n n C1 C2 W26 sing 398 n n C2 C3 W26 sing 399 n n C1 H1 W26 sing 400 n n C2 H3 W26 sing 401 n n C2 H2 W26 sing 402 n n C3 H5 W26 sing 403 n n C3 H4 W26 sing 404 n n N1 H6 W26 sing 405 n n N2 H7 W26 sing 406 n n C8 H8 W26 sing 407 n n C9 H9 W26 sing 408 n n C11 H10 W26 sing 409 n n C13 H11 W26 sing 410 n n C13 H12 W26 sing 411 n n C13 H13 W26 sing 412 n n N3 H14 W26 sing 413 n n N3 H15 W26 sing 414 n n # _atom_sites.entry_id 8OU6 _atom_sites.fract_transf_matrix[1][1] 0.017547 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016913 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011476 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 ZN A 1 201 201 ZN ZN . E 3 W26 A 1 202 202 W26 W26 . F 4 PO4 A 1 203 203 PO4 PO4 . G 4 PO4 A 1 204 204 PO4 PO4 . H 2 ZN B 1 201 201 ZN ZN . I 3 W26 B 1 202 202 W26 W26 . J 4 PO4 B 1 203 203 PO4 PO4 . K 4 PO4 C 1 201 201 PO4 PO4 . L 2 ZN C 1 202 202 ZN ZN . M 5 HOH A 1 301 301 HOH HOH . M 5 HOH A 2 302 302 HOH HOH . M 5 HOH A 3 303 303 HOH HOH . M 5 HOH A 4 304 304 HOH HOH . M 5 HOH A 5 305 305 HOH HOH . M 5 HOH A 6 306 306 HOH HOH . M 5 HOH A 7 307 307 HOH HOH . M 5 HOH A 8 308 308 HOH HOH . M 5 HOH A 9 309 309 HOH HOH . M 5 HOH A 10 310 310 HOH HOH . M 5 HOH A 11 311 311 HOH HOH . M 5 HOH A 12 312 312 HOH HOH . M 5 HOH A 13 313 313 HOH HOH . M 5 HOH A 14 314 314 HOH HOH . M 5 HOH A 15 315 315 HOH HOH . M 5 HOH A 16 316 316 HOH HOH . M 5 HOH A 17 317 317 HOH HOH . M 5 HOH A 18 318 318 HOH HOH . M 5 HOH A 19 319 319 HOH HOH . M 5 HOH A 20 320 320 HOH HOH . M 5 HOH A 21 321 321 HOH HOH . M 5 HOH A 22 322 322 HOH HOH . M 5 HOH A 23 323 323 HOH HOH . M 5 HOH A 24 324 324 HOH HOH . N 5 HOH B 1 301 301 HOH HOH . N 5 HOH B 2 302 302 HOH HOH . N 5 HOH B 3 303 303 HOH HOH . N 5 HOH B 4 304 304 HOH HOH . N 5 HOH B 5 305 305 HOH HOH . N 5 HOH B 6 306 306 HOH HOH . N 5 HOH B 7 307 307 HOH HOH . N 5 HOH B 8 308 308 HOH HOH . N 5 HOH B 9 309 309 HOH HOH . N 5 HOH B 10 310 310 HOH HOH . N 5 HOH B 11 311 311 HOH HOH . N 5 HOH B 12 312 312 HOH HOH . N 5 HOH B 13 313 313 HOH HOH . N 5 HOH B 14 314 314 HOH HOH . N 5 HOH B 15 315 315 HOH HOH . N 5 HOH B 16 316 316 HOH HOH . N 5 HOH B 17 317 317 HOH HOH . N 5 HOH B 18 318 318 HOH HOH . N 5 HOH B 19 319 319 HOH HOH . N 5 HOH B 20 320 320 HOH HOH . N 5 HOH B 21 321 321 HOH HOH . N 5 HOH B 22 322 322 HOH HOH . N 5 HOH B 23 323 323 HOH HOH . N 5 HOH B 24 324 324 HOH HOH . N 5 HOH B 25 325 325 HOH HOH . N 5 HOH B 26 326 326 HOH HOH . N 5 HOH B 27 327 327 HOH HOH . N 5 HOH B 28 328 328 HOH HOH . N 5 HOH B 29 329 329 HOH HOH . O 5 HOH C 1 301 301 HOH HOH . O 5 HOH C 2 302 302 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O2 W26 . . . E 3 26.214 15.683 -8.586 1 44.42 ? O2 W26 202 A 1 HETATM 2 O O1 W26 . . . E 3 21.843 15.424 -7.383 1 38.25 ? O1 W26 202 A 1 HETATM 3 C C1 W26 . . . E 3 25.375 17.551 -7.352 1 42.15 ? C1 W26 202 A 1 HETATM 4 C C2 W26 . . . E 3 24.06 18.312 -7.261 1 42.9 ? C2 W26 202 A 1 HETATM 5 C C3 W26 . . . E 3 22.986 17.398 -6.704 1 40.11 ? C3 W26 202 A 1 HETATM 6 C C4 W26 . . . E 3 22.861 16.098 -7.426 1 39.05 ? C4 W26 202 A 1 HETATM 7 N N1 W26 . . . E 3 24.001 15.621 -8.055 1 40.83 ? N1 W26 202 A 1 HETATM 8 C C5 W26 . . . E 3 25.254 16.211 -8.05 1 43.12 ? C5 W26 202 A 1 HETATM 9 N N2 W26 . . . E 3 26.314 18.382 -8.073 1 52.63 ? N2 W26 202 A 1 HETATM 10 C C6 W26 . . . E 3 27.49 18.725 -7.545 1 61.96 ? C6 W26 202 A 1 HETATM 11 C C7 W26 . . . E 3 28.527 19.363 -8.431 1 69.69 ? C7 W26 202 A 1 HETATM 12 C C8 W26 . . . E 3 29.708 19.774 -7.79 1 73.99 ? C8 W26 202 A 1 HETATM 13 C C9 W26 . . . E 3 30.731 20.349 -8.499 1 80.29 ? C9 W26 202 A 1 HETATM 14 C C10 W26 . . . E 3 30.619 20.536 -9.87 1 90.04 ? C10 W26 202 A 1 HETATM 15 C C11 W26 . . . E 3 29.453 20.132 -10.514 1 85.32 ? C11 W26 202 A 1 HETATM 16 C C12 W26 . . . E 3 28.402 19.547 -9.819 1 74.53 ? C12 W26 202 A 1 HETATM 17 C C13 W26 . . . E 3 27.189 19.138 -10.619 1 75.71 ? C13 W26 202 A 1 HETATM 18 N N3 W26 . . . E 3 31.644 21.118 -10.583 1 94.94 ? N3 W26 202 A 1 HETATM 19 O O3 W26 . . . E 3 27.739 18.46 -6.372 1 53.31 ? O3 W26 202 A 1 HETATM 20 H H1 W26 . . . E 3 25.723 17.394 -6.432 1 44.48 ? H1 W26 202 A 1 HETATM 21 H H3 W26 . . . E 3 23.796 18.625 -8.15 1 42.12 ? H3 W26 202 A 1 HETATM 22 H H2 W26 . . . E 3 24.166 19.092 -6.678 1 42 ? H2 W26 202 A 1 HETATM 23 H H5 W26 . . . E 3 23.181 17.205 -5.761 1 40.47 ? H5 W26 202 A 1 HETATM 24 H H4 W26 . . . E 3 22.118 17.855 -6.744 1 40.45 ? H4 W26 202 A 1 HETATM 25 H H6 W26 . . . E 3 23.919 14.867 -8.503 1 40.93 ? H6 W26 202 A 1 HETATM 26 H H7 W26 . . . E 3 26.078 18.695 -8.833 1 52.53 ? H7 W26 202 A 1 HETATM 27 H H8 W26 . . . E 3 29.805 19.651 -6.863 1 73.9 ? H8 W26 202 A 1 HETATM 28 H H9 W26 . . . E 3 31.516 20.623 -8.056 1 80.82 ? H9 W26 202 A 1 HETATM 29 H H10 W26 . . . E 3 29.373 20.259 -11.444 1 83.53 ? H10 W26 202 A 1 HETATM 30 H H11 W26 . . . E 3 27.35 19.314 -11.562 1 75.16 ? H11 W26 202 A 1 HETATM 31 H H12 W26 . . . E 3 26.415 19.652 -10.328 1 74.83 ? H12 W26 202 A 1 HETATM 32 H H13 W26 . . . E 3 27.02 18.188 -10.496 1 74.84 ? H13 W26 202 A 1 HETATM 33 H H14 W26 . . . E 3 31.563 21.231 -11.449 1 92.91 ? H14 W26 202 A 1 HETATM 34 H H15 W26 . . . E 3 32.373 21.374 -10.169 1 93.2 ? H15 W26 202 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 311 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 34 #