data_8OU7
#
_model_server_result.job_id            me7Qkgapn4cQ9fzzSUDJqQ 
_model_server_result.datetime_utc      '2025-07-03 17:36:47' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8ou7 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"G","auth_seq_id":202}' 
#
_entry.id    8OU7 
#
_exptl.entry_id    8OU7 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              277.276 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            4-azanyl-~{N}-[(3~{S})-2,6-bis(oxidanylidene)piperidin-3-yl]-2-methoxy-benzamide 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            8OU7 
_cell.length_a            56.409 
_cell.length_b            59.548 
_cell.length_c            88.413 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8OU7 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
? monomeric 1 author_defined_assembly 3 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,D,E,J 1 1 
B,F,G,K 2 1 
C,H,I,L 3 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 E N N 
? 3 G N N 
? 3 I N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A SG CYS 24 A CYS 24 1_555 D ZN ZN . A ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.315 ? 
metalc ? metalc2 A SG CYS 27 A CYS 27 1_555 D ZN ZN . A ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.324 ? 
metalc ? metalc3 A SG CYS 90 A CYS 90 1_555 D ZN ZN . A ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.369 ? 
metalc ? metalc4 A SG CYS 93 A CYS 93 1_555 D ZN ZN . A ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.273 ? 
metalc ? metalc5 B SG CYS 24 B CYS 24 1_555 F ZN ZN . B ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.385 ? 
metalc ? metalc6 B SG CYS 27 B CYS 27 1_555 F ZN ZN . B ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.374 ? 
metalc ? metalc7 B SG CYS 90 B CYS 90 1_555 F ZN ZN . B ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.323 ? 
metalc ? metalc8 B SG CYS 93 B CYS 93 1_555 F ZN ZN . B ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.335 ? 
metalc ? metalc9 C SG CYS 24 C CYS 24 1_555 H ZN ZN . C ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.386 ? 
metalc ? metalc10 C SG CYS 27 C CYS 27 1_555 H ZN ZN . C ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.323 ? 
metalc ? metalc11 C SG CYS 90 C CYS 90 1_555 H ZN ZN . C ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.362 ? 
metalc ? metalc12 C SG CYS 93 C CYS 93 1_555 H ZN ZN . C ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.268 ? 
#
_chem_comp.formula           'C13 H15 N3 O4' 
_chem_comp.formula_weight    277.276 
_chem_comp.id                W1F 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              4-azanyl-~{N}-[(3~{S})-2,6-bis(oxidanylidene)piperidin-3-yl]-2-methoxy-benzamide 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C13 O4 W1F sing 376 n n 
N3 C10 W1F sing 377 n n 
C9 C10 W1F doub 378 n y 
C9 C8 W1F sing 379 n y 
O4 C8 W1F sing 380 n n 
C10 C11 W1F sing 381 n y 
C8 C7 W1F doub 382 n y 
O1 C5 W1F doub 383 n n 
C11 C12 W1F doub 384 n y 
C7 C12 W1F sing 385 n y 
C7 C6 W1F sing 386 n n 
C5 N1 W1F sing 387 n n 
C5 C1 W1F sing 388 n n 
N2 C6 W1F sing 389 n n 
N2 C1 W1F sing 390 n n 
N1 C4 W1F sing 391 n n 
C6 O3 W1F doub 392 n n 
C4 O2 W1F doub 393 n n 
C4 C3 W1F sing 394 n n 
C1 C2 W1F sing 395 n n 
C2 C3 W1F sing 396 n n 
C1 H1 W1F sing 397 n n 
N2 H7 W1F sing 398 n n 
C3 H5 W1F sing 399 n n 
C3 H4 W1F sing 400 n n 
C11 H9 W1F sing 401 n n 
C12 H10 W1F sing 402 n n 
C13 H14 W1F sing 403 n n 
C13 H15 W1F sing 404 n n 
C13 H13 W1F sing 405 n n 
C2 H3 W1F sing 406 n n 
C2 H2 W1F sing 407 n n 
N1 H6 W1F sing 408 n n 
C9 H8 W1F sing 409 n n 
N3 H12 W1F sing 410 n n 
N3 H11 W1F sing 411 n n 
#
_atom_sites.entry_id                     8OU7 
_atom_sites.fract_transf_matrix[1][1]    0.017728 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.016793 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.011311 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
D 2 ZN A 1 201 150 ZN ZN . 
E 3 W1F A 1 202 201 W1F 547 . 
F 2 ZN B 1 201 150 ZN ZN . 
G 3 W1F B 1 202 201 W1F 547 . 
H 2 ZN C 1 201 150 ZN ZN . 
I 3 W1F C 1 202 201 W1F 547 . 
J 4 HOH A 1 301 115 HOH HOH . 
J 4 HOH A 2 302 31 HOH HOH . 
J 4 HOH A 3 303 30 HOH HOH . 
J 4 HOH A 4 304 86 HOH HOH . 
J 4 HOH A 5 305 5 HOH HOH . 
J 4 HOH A 6 306 38 HOH HOH . 
J 4 HOH A 7 307 114 HOH HOH . 
J 4 HOH A 8 308 75 HOH HOH . 
J 4 HOH A 9 309 19 HOH HOH . 
J 4 HOH A 10 310 17 HOH HOH . 
J 4 HOH A 11 311 28 HOH HOH . 
J 4 HOH A 12 312 21 HOH HOH . 
J 4 HOH A 13 313 68 HOH HOH . 
J 4 HOH A 14 314 78 HOH HOH . 
J 4 HOH A 15 315 52 HOH HOH . 
J 4 HOH A 16 316 72 HOH HOH . 
J 4 HOH A 17 317 20 HOH HOH . 
J 4 HOH A 18 318 4 HOH HOH . 
J 4 HOH A 19 319 13 HOH HOH . 
J 4 HOH A 20 320 29 HOH HOH . 
J 4 HOH A 21 321 16 HOH HOH . 
J 4 HOH A 22 322 54 HOH HOH . 
J 4 HOH A 23 323 100 HOH HOH . 
J 4 HOH A 24 324 56 HOH HOH . 
J 4 HOH A 25 325 40 HOH HOH . 
J 4 HOH A 26 326 79 HOH HOH . 
J 4 HOH A 27 327 113 HOH HOH . 
J 4 HOH A 28 328 69 HOH HOH . 
J 4 HOH A 29 329 91 HOH HOH . 
J 4 HOH A 30 330 118 HOH HOH . 
J 4 HOH A 31 331 8 HOH HOH . 
J 4 HOH A 32 332 22 HOH HOH . 
K 4 HOH B 1 301 109 HOH HOH . 
K 4 HOH B 2 302 39 HOH HOH . 
K 4 HOH B 3 303 11 HOH HOH . 
K 4 HOH B 4 304 61 HOH HOH . 
K 4 HOH B 5 305 9 HOH HOH . 
K 4 HOH B 6 306 50 HOH HOH . 
K 4 HOH B 7 307 59 HOH HOH . 
K 4 HOH B 8 308 60 HOH HOH . 
K 4 HOH B 9 309 27 HOH HOH . 
K 4 HOH B 10 310 46 HOH HOH . 
K 4 HOH B 11 311 95 HOH HOH . 
K 4 HOH B 12 312 43 HOH HOH . 
K 4 HOH B 13 313 15 HOH HOH . 
K 4 HOH B 14 314 94 HOH HOH . 
K 4 HOH B 15 315 24 HOH HOH . 
K 4 HOH B 16 316 6 HOH HOH . 
K 4 HOH B 17 317 76 HOH HOH . 
K 4 HOH B 18 318 37 HOH HOH . 
K 4 HOH B 19 319 2 HOH HOH . 
K 4 HOH B 20 320 88 HOH HOH . 
K 4 HOH B 21 321 34 HOH HOH . 
K 4 HOH B 22 322 65 HOH HOH . 
K 4 HOH B 23 323 45 HOH HOH . 
K 4 HOH B 24 324 48 HOH HOH . 
K 4 HOH B 25 325 93 HOH HOH . 
K 4 HOH B 26 326 12 HOH HOH . 
K 4 HOH B 27 327 25 HOH HOH . 
K 4 HOH B 28 328 26 HOH HOH . 
K 4 HOH B 29 329 36 HOH HOH . 
K 4 HOH B 30 330 10 HOH HOH . 
K 4 HOH B 31 331 18 HOH HOH . 
K 4 HOH B 32 332 3 HOH HOH . 
K 4 HOH B 33 333 14 HOH HOH . 
K 4 HOH B 34 334 82 HOH HOH . 
K 4 HOH B 35 335 33 HOH HOH . 
K 4 HOH B 36 336 85 HOH HOH . 
K 4 HOH B 37 337 1 HOH HOH . 
K 4 HOH B 38 338 58 HOH HOH . 
K 4 HOH B 39 339 23 HOH HOH . 
K 4 HOH B 40 340 51 HOH HOH . 
K 4 HOH B 41 341 55 HOH HOH . 
K 4 HOH B 42 342 112 HOH HOH . 
K 4 HOH B 43 343 116 HOH HOH . 
L 4 HOH C 1 301 77 HOH HOH . 
L 4 HOH C 2 302 73 HOH HOH . 
L 4 HOH C 3 303 92 HOH HOH . 
L 4 HOH C 4 304 119 HOH HOH . 
L 4 HOH C 5 305 42 HOH HOH . 
L 4 HOH C 6 306 66 HOH HOH . 
L 4 HOH C 7 307 74 HOH HOH . 
L 4 HOH C 8 308 87 HOH HOH . 
L 4 HOH C 9 309 62 HOH HOH . 
L 4 HOH C 10 310 117 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 W1F . . . G 3 23.591 14.352 27.207 1 31.48 0 C1 W1F 202 B 1 
HETATM 2 N N2 W1F . . . G 3 23.279 15.41 28.132 1 29.57 0 N2 W1F 202 B 1 
HETATM 3 C C3 W1F . . . G 3 24.137 11.948 26.902 1 27.73 0 C3 W1F 202 B 1 
HETATM 4 C C4 W1F . . . G 3 23.023 11.781 25.976 1 22.9 0 C4 W1F 202 B 1 
HETATM 5 C C5 W1F . . . G 3 22.43 14.184 26.261 1 30.61 0 C5 W1F 202 B 1 
HETATM 6 C C6 W1F . . . G 3 24.093 16.369 28.495 1 28.48 0 C6 W1F 202 B 1 
HETATM 7 C C10 W1F . . . G 3 22.855 19.583 31.03 1 47.87 0 C10 W1F 202 B 1 
HETATM 8 C C11 W1F . . . G 3 24.076 19.561 30.344 1 49.87 0 C11 W1F 202 B 1 
HETATM 9 C C12 W1F . . . G 3 24.415 18.473 29.576 1 48.25 0 C12 W1F 202 B 1 
HETATM 10 C C13 W1F . . . G 3 20.474 16.205 31.02 1 45.56 0 C13 W1F 202 B 1 
HETATM 11 C C2 W1F . . . G 3 23.961 13.067 27.908 1 29.43 0 C2 W1F 202 B 1 
HETATM 12 N N1 W1F . . . G 3 22.226 12.895 25.759 1 26.94 0 N1 W1F 202 B 1 
HETATM 13 O O1 W1F . . . G 3 21.648 15.101 25.984 1 32.62 0 O1 W1F 202 B 1 
HETATM 14 O O2 W1F . . . G 3 22.75 10.774 25.369 1 26.38 0 O2 W1F 202 B 1 
HETATM 15 O O3 W1F . . . G 3 25.173 16.535 27.953 1 32.53 0 O3 W1F 202 B 1 
HETATM 16 C C7 W1F . . . G 3 23.54 17.404 29.415 1 32.68 0 C7 W1F 202 B 1 
HETATM 17 C C8 W1F . . . G 3 22.333 17.42 30.121 1 36.39 0 C8 W1F 202 B 1 
HETATM 18 C C9 W1F . . . G 3 21.983 18.506 30.904 1 52.66 0 C9 W1F 202 B 1 
HETATM 19 N N3 W1F . . . G 3 22.535 20.622 31.816 1 68.22 0 N3 W1F 202 B 1 
HETATM 20 O O4 W1F . . . G 3 21.472 16.388 29.998 1 36.99 0 O4 W1F 202 B 1 
HETATM 21 H H1 W1F . . . G 3 24.373 14.645 26.665 1 30.56 0 H1 W1F 202 B 1 
HETATM 22 H H7 W1F . . . G 3 22.482 15.402 28.478 1 29.81 0 H7 W1F 202 B 1 
HETATM 23 H H5 W1F . . . G 3 24.948 12.115 26.374 1 26.85 0 H5 W1F 202 B 1 
HETATM 24 H H4 W1F . . . G 3 24.262 11.101 27.382 1 26.85 0 H4 W1F 202 B 1 
HETATM 25 H H9 W1F . . . G 3 24.673 20.284 30.432 1 48.96 0 H9 W1F 202 B 1 
HETATM 26 H H10 W1F . . . G 3 25.226 18.483 29.099 1 44 0 H10 W1F 202 B 1 
HETATM 27 H H14 W1F . . . G 3 20.026 15.355 30.88 1 42.75 0 H14 W1F 202 B 1 
HETATM 28 H H15 W1F . . . G 3 19.823 16.923 30.972 1 42.81 0 H15 W1F 202 B 1 
HETATM 29 H H13 W1F . . . G 3 20.899 16.206 31.894 1 42.76 0 H13 W1F 202 B 1 
HETATM 30 H H3 W1F . . . G 3 23.26 12.827 28.543 1 29.51 0 H3 W1F 202 B 1 
HETATM 31 H H2 W1F . . . G 3 24.797 13.192 28.407 1 29.48 0 H2 W1F 202 B 1 
HETATM 32 H H6 W1F . . . G 3 21.515 12.777 25.251 1 26.76 0 H6 W1F 202 B 1 
HETATM 33 H H8 W1F . . . G 3 21.162 18.507 31.371 1 47.21 0 H8 W1F 202 B 1 
HETATM 34 H H12 W1F . . . G 3 21.774 20.623 32.253 1 60.86 0 H12 W1F 202 B 1 
HETATM 35 H H11 W1F . . . G 3 23.086 21.3 31.892 1 60.69 0 H11 W1F 202 B 1 
#
_model_server_stats.io_time_ms              409 
_model_server_stats.parse_time_ms           25 
_model_server_stats.create_model_time_ms    6 
_model_server_stats.query_time_ms           328 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           35 
#