data_8OU9
#
_model_server_result.job_id            RZJX7Aau1MFyvRgrgy8r0g 
_model_server_result.datetime_utc      '2024-12-20 12:51:41' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8ou9 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"G","auth_seq_id":202}' 
#
_entry.id    8OU9 
#
_exptl.entry_id    8OU9 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              263.249 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            4-azanyl-~{N}-[(3~{S})-2,6-bis(oxidanylidene)piperidin-3-yl]-2-oxidanyl-benzamide 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            8OU9 
_cell.length_a            56.328 
_cell.length_b            59.739 
_cell.length_c            88.305 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8OU9 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    trimeric 
_pdbx_struct_assembly.oligomeric_count      3 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 E N N 
? 3 G N N 
? 3 I N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A SG CYS 7 A CYS 24 1_555 D ZN ZN . A ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.304 ? 
metalc ? metalc2 A SG CYS 10 A CYS 27 1_555 D ZN ZN . A ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.368 ? 
metalc ? metalc3 A SG CYS 73 A CYS 90 1_555 D ZN ZN . A ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.358 ? 
metalc ? metalc4 A SG CYS 76 A CYS 93 1_555 D ZN ZN . A ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.259 ? 
metalc ? metalc5 B SG CYS 7 B CYS 24 1_555 F ZN ZN . B ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.408 ? 
metalc ? metalc6 B SG CYS 10 B CYS 27 1_555 F ZN ZN . B ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.339 ? 
metalc ? metalc7 B SG CYS 73 B CYS 90 1_555 F ZN ZN . B ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.298 ? 
metalc ? metalc8 B SG CYS 76 B CYS 93 1_555 F ZN ZN . B ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.301 ? 
metalc ? metalc9 C SG CYS 7 C CYS 24 1_555 H ZN ZN . C ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.369 ? 
metalc ? metalc10 C SG CYS 10 C CYS 27 1_555 H ZN ZN . C ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.317 ? 
metalc ? metalc11 C SG CYS 73 C CYS 90 1_555 H ZN ZN . C ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.341 ? 
metalc ? metalc12 C SG CYS 76 C CYS 93 1_555 H ZN ZN . C ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.343 ? 
#
_chem_comp.formula           'C12 H13 N3 O4' 
_chem_comp.formula_weight    263.249 
_chem_comp.id                W1B 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              4-azanyl-~{N}-[(3~{S})-2,6-bis(oxidanylidene)piperidin-3-yl]-2-oxidanyl-benzamide 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N3 C10 W1B sing 376 n n 
C11 C10 W1B doub 377 n y 
C11 C12 W1B sing 378 n y 
O4 C12 W1B sing 379 n n 
C10 C9 W1B sing 380 n y 
C12 C7 W1B doub 381 n y 
O1 C5 W1B doub 382 n n 
C9 C8 W1B doub 383 n y 
C7 C8 W1B sing 384 n y 
C7 C6 W1B sing 385 n n 
N2 C6 W1B sing 386 n n 
N2 C1 W1B sing 387 n n 
C5 N1 W1B sing 388 n n 
C5 C1 W1B sing 389 n n 
N1 C4 W1B sing 390 n n 
C6 O3 W1B doub 391 n n 
C4 O2 W1B doub 392 n n 
C4 C3 W1B sing 393 n n 
C1 C2 W1B sing 394 n n 
C2 C3 W1B sing 395 n n 
N1 H6 W1B sing 396 n n 
N3 H12 W1B sing 397 n n 
N3 H13 W1B sing 398 n n 
C2 H3 W1B sing 399 n n 
C2 H2 W1B sing 400 n n 
C1 H1 W1B sing 401 n n 
C3 H5 W1B sing 402 n n 
C3 H4 W1B sing 403 n n 
N2 H7 W1B sing 404 n n 
C8 H8 W1B sing 405 n n 
C9 H9 W1B sing 406 n n 
C11 H10 W1B sing 407 n n 
O4 H11 W1B sing 408 n n 
#
_atom_sites.entry_id                     8OU9 
_atom_sites.fract_transf_matrix[1][1]    0.017753 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.016739 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.011324 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
D 2 ZN A 1 201 201 ZN ZN . 
E 3 W1B A 1 202 202 W1B W1B . 
F 2 ZN B 1 201 201 ZN ZN . 
G 3 W1B B 1 202 202 W1B W1B . 
H 2 ZN C 1 201 201 ZN ZN . 
I 3 W1B C 1 202 202 W1B W1B . 
J 4 HOH A 1 301 301 HOH HOH . 
J 4 HOH A 2 302 302 HOH HOH . 
J 4 HOH A 3 303 303 HOH HOH . 
J 4 HOH A 4 304 304 HOH HOH . 
J 4 HOH A 5 305 305 HOH HOH . 
J 4 HOH A 6 306 306 HOH HOH . 
J 4 HOH A 7 307 307 HOH HOH . 
J 4 HOH A 8 308 308 HOH HOH . 
J 4 HOH A 9 309 309 HOH HOH . 
J 4 HOH A 10 310 310 HOH HOH . 
J 4 HOH A 11 311 311 HOH HOH . 
J 4 HOH A 12 312 312 HOH HOH . 
J 4 HOH A 13 313 313 HOH HOH . 
J 4 HOH A 14 314 314 HOH HOH . 
J 4 HOH A 15 315 315 HOH HOH . 
J 4 HOH A 16 316 316 HOH HOH . 
J 4 HOH A 17 317 317 HOH HOH . 
J 4 HOH A 18 318 319 HOH HOH . 
J 4 HOH A 19 319 318 HOH HOH . 
J 4 HOH A 20 320 320 HOH HOH . 
J 4 HOH A 21 321 321 HOH HOH . 
J 4 HOH A 22 322 322 HOH HOH . 
J 4 HOH A 23 323 323 HOH HOH . 
J 4 HOH A 24 324 324 HOH HOH . 
J 4 HOH A 25 325 325 HOH HOH . 
J 4 HOH A 26 326 326 HOH HOH . 
J 4 HOH A 27 327 327 HOH HOH . 
J 4 HOH A 28 328 328 HOH HOH . 
J 4 HOH A 29 329 329 HOH HOH . 
J 4 HOH A 30 330 330 HOH HOH . 
J 4 HOH A 31 331 331 HOH HOH . 
K 4 HOH B 1 301 301 HOH HOH . 
K 4 HOH B 2 302 302 HOH HOH . 
K 4 HOH B 3 303 303 HOH HOH . 
K 4 HOH B 4 304 304 HOH HOH . 
K 4 HOH B 5 305 305 HOH HOH . 
K 4 HOH B 6 306 306 HOH HOH . 
K 4 HOH B 7 307 307 HOH HOH . 
K 4 HOH B 8 308 308 HOH HOH . 
K 4 HOH B 9 309 309 HOH HOH . 
K 4 HOH B 10 310 310 HOH HOH . 
K 4 HOH B 11 311 311 HOH HOH . 
K 4 HOH B 12 312 312 HOH HOH . 
K 4 HOH B 13 313 313 HOH HOH . 
K 4 HOH B 14 314 314 HOH HOH . 
K 4 HOH B 15 315 315 HOH HOH . 
K 4 HOH B 16 316 316 HOH HOH . 
K 4 HOH B 17 317 317 HOH HOH . 
K 4 HOH B 18 318 318 HOH HOH . 
K 4 HOH B 19 319 319 HOH HOH . 
K 4 HOH B 20 320 320 HOH HOH . 
K 4 HOH B 21 321 321 HOH HOH . 
K 4 HOH B 22 322 322 HOH HOH . 
K 4 HOH B 23 323 323 HOH HOH . 
K 4 HOH B 24 324 324 HOH HOH . 
K 4 HOH B 25 325 325 HOH HOH . 
K 4 HOH B 26 326 326 HOH HOH . 
K 4 HOH B 27 327 327 HOH HOH . 
K 4 HOH B 28 328 328 HOH HOH . 
K 4 HOH B 29 329 329 HOH HOH . 
K 4 HOH B 30 330 330 HOH HOH . 
K 4 HOH B 31 331 331 HOH HOH . 
K 4 HOH B 32 332 332 HOH HOH . 
K 4 HOH B 33 333 333 HOH HOH . 
K 4 HOH B 34 334 334 HOH HOH . 
K 4 HOH B 35 335 335 HOH HOH . 
K 4 HOH B 36 336 336 HOH HOH . 
K 4 HOH B 37 337 337 HOH HOH . 
K 4 HOH B 38 338 338 HOH HOH . 
K 4 HOH B 39 339 339 HOH HOH . 
K 4 HOH B 40 340 340 HOH HOH . 
K 4 HOH B 41 341 341 HOH HOH . 
K 4 HOH B 42 342 342 HOH HOH . 
K 4 HOH B 43 343 343 HOH HOH . 
K 4 HOH B 44 344 344 HOH HOH . 
L 4 HOH C 1 301 301 HOH HOH . 
L 4 HOH C 2 302 302 HOH HOH . 
L 4 HOH C 3 303 303 HOH HOH . 
L 4 HOH C 4 304 304 HOH HOH . 
L 4 HOH C 5 305 305 HOH HOH . 
L 4 HOH C 6 306 306 HOH HOH . 
L 4 HOH C 7 307 307 HOH HOH . 
L 4 HOH C 8 308 308 HOH HOH . 
L 4 HOH C 9 309 309 HOH HOH . 
L 4 HOH C 10 310 310 HOH HOH . 
L 4 HOH C 11 311 311 HOH HOH . 
L 4 HOH C 12 312 312 HOH HOH . 
L 4 HOH C 13 313 313 HOH HOH . 
L 4 HOH C 14 314 314 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C4 W1B . . . G 3 23.038 11.97 25.925 1 22.85 ? C4 W1B 202 B 1 
HETATM 2 C C5 W1B . . . G 3 22.562 14.366 26.157 1 27.83 ? C5 W1B 202 B 1 
HETATM 3 C C6 W1B . . . G 3 24.221 16.529 28.441 1 32.62 ? C6 W1B 202 B 1 
HETATM 4 N N1 W1B . . . G 3 22.309 13.115 25.631 1 22.67 ? N1 W1B 202 B 1 
HETATM 5 N N3 W1B . . . G 3 22.21 20.657 31.61 1 58.31 ? N3 W1B 202 B 1 
HETATM 6 C C2 W1B . . . G 3 23.998 13.198 27.912 1 26.32 ? C2 W1B 202 B 1 
HETATM 7 C C1 W1B . . . G 3 23.687 14.494 27.173 1 26.5 ? C1 W1B 202 B 1 
HETATM 8 C C3 W1B . . . G 3 24.174 12.138 26.845 1 26.76 ? C3 W1B 202 B 1 
HETATM 9 O O1 W1B . . . G 3 21.883 15.307 25.812 1 26.36 ? O1 W1B 202 B 1 
HETATM 10 O O2 W1B . . . G 3 22.788 10.937 25.334 1 21.1 ? O2 W1B 202 B 1 
HETATM 11 N N2 W1B . . . G 3 23.408 15.554 28.114 1 27.42 ? N2 W1B 202 B 1 
HETATM 12 C C7 W1B . . . G 3 23.541 17.485 29.365 1 33.97 ? C7 W1B 202 B 1 
HETATM 13 O O3 W1B . . . G 3 25.341 16.745 27.917 1 34.33 ? O3 W1B 202 B 1 
HETATM 14 C C8 W1B . . . G 3 24.321 18.61 29.557 1 41.6 ? C8 W1B 202 B 1 
HETATM 15 C C9 W1B . . . G 3 23.881 19.65 30.319 1 49.75 ? C9 W1B 202 B 1 
HETATM 16 C C10 W1B . . . G 3 22.608 19.609 30.888 1 41.29 ? C10 W1B 202 B 1 
HETATM 17 C C11 W1B . . . G 3 21.797 18.488 30.696 1 40.59 ? C11 W1B 202 B 1 
HETATM 18 C C12 W1B . . . G 3 22.262 17.426 29.942 1 32.47 ? C12 W1B 202 B 1 
HETATM 19 O O4 W1B . . . G 3 21.427 16.351 29.818 1 43.09 ? O4 W1B 202 B 1 
HETATM 20 H H6 W1B . . . G 3 21.636 13.033 25.067 1 23.83 ? H6 W1B 202 B 1 
HETATM 21 H H12 W1B . . . G 3 21.413 20.654 31.978 1 52.23 ? H12 W1B 202 B 1 
HETATM 22 H H13 W1B . . . G 3 22.741 21.346 31.717 1 52.29 ? H13 W1B 202 B 1 
HETATM 23 H H3 W1B . . . G 3 23.262 12.962 28.506 1 26.49 ? H3 W1B 202 B 1 
HETATM 24 H H2 W1B . . . G 3 24.82 13.291 28.439 1 26.47 ? H2 W1B 202 B 1 
HETATM 25 H H1 W1B . . . G 3 24.504 14.755 26.666 1 26.95 ? H1 W1B 202 B 1 
HETATM 26 H H5 W1B . . . G 3 24.967 12.354 26.307 1 25.66 ? H5 W1B 202 B 1 
HETATM 27 H H4 W1B . . . G 3 24.339 11.273 27.279 1 25.67 ? H4 W1B 202 B 1 
HETATM 28 H H7 W1B . . . G 3 22.63 15.533 28.495 1 28.4 ? H7 W1B 202 B 1 
HETATM 29 H H8 W1B . . . G 3 25.166 18.665 29.145 1 41.19 ? H8 W1B 202 B 1 
HETATM 30 H H9 W1B . . . G 3 24.415 20.419 30.424 1 45.6 ? H9 W1B 202 B 1 
HETATM 31 H H10 W1B . . . G 3 20.946 18.431 31.107 1 38.88 ? H10 W1B 202 B 1 
#
_model_server_stats.io_time_ms              77 
_model_server_stats.parse_time_ms           22 
_model_server_stats.create_model_time_ms    20 
_model_server_stats.query_time_ms           415 
_model_server_stats.encode_time_ms          11 
_model_server_stats.element_count           31 
#