data_8OUM # _model_server_result.job_id QB8CXSrgxewE41TIQY4POw _model_server_result.datetime_utc '2024-11-23 07:08:45' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8oum # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":202}' # _entry.id 8OUM # _exptl.entry_id 8OUM _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 94.47 _cell.angle_gamma 90 _cell.entry_id 8OUM _cell.length_a 87.25 _cell.length_b 54.88 _cell.length_c 121.79 _cell.Z_PDB 10 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8OUM _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 ? monomeric 1 author_defined_assembly 3 ? monomeric 1 author_defined_assembly 4 ? monomeric 1 author_defined_assembly 5 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,F,G,P 1 1 B,H,I,Q 2 1 C,J,K,R 3 1 D,L,M,S 4 1 E,N,O,T 5 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 G N N ? 3 I N N ? 3 K N N ? 3 M N N ? 3 O N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OG1 THR 18 A THR 29 1_555 G MG MG . A MG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.129 ? metalc ? metalc2 A OG1 THR 35 A THR 46 1_555 G MG MG . A MG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.108 ? metalc ? metalc3 F O3G GTP . A GTP 201 1_555 G MG MG . A MG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.965 ? metalc ? metalc4 F O2B GTP . A GTP 201 1_555 G MG MG . A MG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.17 ? metalc ? metalc5 G MG MG . A MG 202 1_555 P O HOH . A HOH 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.012 ? metalc ? metalc6 G MG MG . A MG 202 1_555 P O HOH . A HOH 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.159 ? metalc ? metalc7 B OG1 THR 18 B THR 29 1_555 I MG MG . B MG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.15 ? metalc ? metalc8 B OG1 THR 35 B THR 46 1_555 I MG MG . B MG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.936 ? metalc ? metalc9 H O3G GTP . B GTP 201 1_555 I MG MG . B MG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? metalc ? metalc10 H O2B GTP . B GTP 201 1_555 I MG MG . B MG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.322 ? metalc ? metalc11 I MG MG . B MG 202 1_555 Q O HOH . B HOH 305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.948 ? metalc ? metalc12 I MG MG . B MG 202 1_555 Q O HOH . B HOH 306 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.509 ? metalc ? metalc13 C OG1 THR 18 C THR 29 1_555 K MG MG . C MG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.206 ? metalc ? metalc14 C OG1 THR 35 C THR 46 1_555 K MG MG . C MG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.173 ? metalc ? metalc15 J O3G GTP . C GTP 201 1_555 K MG MG . C MG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.985 ? metalc ? metalc16 J O2B GTP . C GTP 201 1_555 K MG MG . C MG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.312 ? metalc ? metalc17 K MG MG . C MG 202 1_555 R O HOH . C HOH 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? metalc ? metalc18 D OG1 THR 18 D THR 29 1_555 M MG MG . D MG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.164 ? metalc ? metalc19 D OG1 THR 35 D THR 46 1_555 M MG MG . D MG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.373 ? metalc ? metalc20 L O3G GTP . D GTP 201 1_555 M MG MG . D MG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.904 ? metalc ? metalc21 L O2B GTP . D GTP 201 1_555 M MG MG . D MG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.933 ? metalc ? metalc22 M MG MG . D MG 202 1_555 S O HOH . D HOH 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.948 ? metalc ? metalc23 M MG MG . D MG 202 1_555 S O HOH . D HOH 305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.066 ? metalc ? metalc24 E OG1 THR 18 E THR 29 1_555 O MG MG . E MG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.943 ? metalc ? metalc25 E OG1 THR 35 E THR 46 1_555 O MG MG . E MG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.304 ? metalc ? metalc26 N O3G GTP . E GTP 201 1_555 O MG MG . E MG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.137 ? metalc ? metalc27 N O2B GTP . E GTP 201 1_555 O MG MG . E MG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.945 ? metalc ? metalc28 O MG MG . E MG 202 1_555 T O HOH . E HOH 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.914 ? metalc ? metalc29 O MG MG . E MG 202 1_555 T O HOH . E HOH 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.224 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 8OUM _atom_sites.fract_transf_matrix[1][1] 0.011461 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000896 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018222 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008236 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code F 2 GTP A 1 201 201 GTP GTP . G 3 MG A 1 202 202 MG MG . H 2 GTP B 1 201 201 GTP GTP . I 3 MG B 1 202 202 MG MG . J 2 GTP C 1 201 201 GTP GTP . K 3 MG C 1 202 202 MG MG . L 2 GTP D 1 201 201 GTP GTP . M 3 MG D 1 202 202 MG MG . N 2 GTP E 1 201 201 GTP GTP . O 3 MG E 1 202 202 MG MG . P 4 HOH A 1 301 203 HOH HOH . P 4 HOH A 2 302 204 HOH HOH . P 4 HOH A 3 303 34 HOH HOH . P 4 HOH A 4 304 37 HOH HOH . P 4 HOH A 5 305 76 HOH HOH . P 4 HOH A 6 306 54 HOH HOH . P 4 HOH A 7 307 14 HOH HOH . P 4 HOH A 8 308 66 HOH HOH . P 4 HOH A 9 309 89 HOH HOH . P 4 HOH A 10 310 87 HOH HOH . P 4 HOH A 11 311 44 HOH HOH . P 4 HOH A 12 312 52 HOH HOH . P 4 HOH A 13 313 100 HOH HOH . P 4 HOH A 14 314 110 HOH HOH . P 4 HOH A 15 315 27 HOH HOH . P 4 HOH A 16 316 109 HOH HOH . P 4 HOH A 17 317 96 HOH HOH . P 4 HOH A 18 318 18 HOH HOH . P 4 HOH A 19 319 79 HOH HOH . P 4 HOH A 20 320 65 HOH HOH . P 4 HOH A 21 321 92 HOH HOH . P 4 HOH A 22 322 77 HOH HOH . P 4 HOH A 23 323 88 HOH HOH . P 4 HOH A 24 324 33 HOH HOH . P 4 HOH A 25 325 93 HOH HOH . P 4 HOH A 26 326 91 HOH HOH . P 4 HOH A 27 327 80 HOH HOH . Q 4 HOH B 1 301 67 HOH HOH . Q 4 HOH B 2 302 31 HOH HOH . Q 4 HOH B 3 303 9 HOH HOH . Q 4 HOH B 4 304 53 HOH HOH . Q 4 HOH B 5 305 203 HOH HOH . Q 4 HOH B 6 306 204 HOH HOH . Q 4 HOH B 7 307 45 HOH HOH . Q 4 HOH B 8 308 7 HOH HOH . Q 4 HOH B 9 309 50 HOH HOH . Q 4 HOH B 10 310 86 HOH HOH . Q 4 HOH B 11 311 28 HOH HOH . Q 4 HOH B 12 312 39 HOH HOH . Q 4 HOH B 13 313 36 HOH HOH . Q 4 HOH B 14 314 3 HOH HOH . Q 4 HOH B 15 315 8 HOH HOH . Q 4 HOH B 16 316 64 HOH HOH . Q 4 HOH B 17 317 47 HOH HOH . Q 4 HOH B 18 318 69 HOH HOH . Q 4 HOH B 19 319 1 HOH HOH . Q 4 HOH B 20 320 15 HOH HOH . Q 4 HOH B 21 321 63 HOH HOH . Q 4 HOH B 22 322 98 HOH HOH . Q 4 HOH B 23 323 13 HOH HOH . Q 4 HOH B 24 324 23 HOH HOH . Q 4 HOH B 25 325 84 HOH HOH . Q 4 HOH B 26 326 10 HOH HOH . Q 4 HOH B 27 327 61 HOH HOH . Q 4 HOH B 28 328 102 HOH HOH . Q 4 HOH B 29 329 94 HOH HOH . Q 4 HOH B 30 330 58 HOH HOH . R 4 HOH C 1 301 203 HOH HOH . R 4 HOH C 2 302 21 HOH HOH . R 4 HOH C 3 303 5 HOH HOH . R 4 HOH C 4 304 78 HOH HOH . R 4 HOH C 5 305 46 HOH HOH . R 4 HOH C 6 306 24 HOH HOH . R 4 HOH C 7 307 20 HOH HOH . R 4 HOH C 8 308 95 HOH HOH . R 4 HOH C 9 309 49 HOH HOH . R 4 HOH C 10 310 11 HOH HOH . R 4 HOH C 11 311 74 HOH HOH . R 4 HOH C 12 312 40 HOH HOH . R 4 HOH C 13 313 12 HOH HOH . R 4 HOH C 14 314 19 HOH HOH . R 4 HOH C 15 315 82 HOH HOH . R 4 HOH C 16 316 16 HOH HOH . R 4 HOH C 17 317 29 HOH HOH . R 4 HOH C 18 318 71 HOH HOH . R 4 HOH C 19 319 105 HOH HOH . S 4 HOH D 1 301 204 HOH HOH . S 4 HOH D 2 302 68 HOH HOH . S 4 HOH D 3 303 108 HOH HOH . S 4 HOH D 4 304 70 HOH HOH . S 4 HOH D 5 305 203 HOH HOH . S 4 HOH D 6 306 104 HOH HOH . S 4 HOH D 7 307 99 HOH HOH . S 4 HOH D 8 308 22 HOH HOH . S 4 HOH D 9 309 112 HOH HOH . S 4 HOH D 10 310 62 HOH HOH . S 4 HOH D 11 311 55 HOH HOH . S 4 HOH D 12 312 57 HOH HOH . S 4 HOH D 13 313 25 HOH HOH . S 4 HOH D 14 314 51 HOH HOH . S 4 HOH D 15 315 101 HOH HOH . S 4 HOH D 16 316 59 HOH HOH . S 4 HOH D 17 317 43 HOH HOH . S 4 HOH D 18 318 107 HOH HOH . S 4 HOH D 19 319 26 HOH HOH . S 4 HOH D 20 320 73 HOH HOH . S 4 HOH D 21 321 81 HOH HOH . S 4 HOH D 22 322 6 HOH HOH . S 4 HOH D 23 323 106 HOH HOH . S 4 HOH D 24 324 72 HOH HOH . T 4 HOH E 1 301 42 HOH HOH . T 4 HOH E 2 302 204 HOH HOH . T 4 HOH E 3 303 203 HOH HOH . T 4 HOH E 4 304 30 HOH HOH . T 4 HOH E 5 305 41 HOH HOH . T 4 HOH E 6 306 83 HOH HOH . T 4 HOH E 7 307 85 HOH HOH . T 4 HOH E 8 308 32 HOH HOH . T 4 HOH E 9 309 111 HOH HOH . T 4 HOH E 10 310 2 HOH HOH . T 4 HOH E 11 311 38 HOH HOH . T 4 HOH E 12 312 97 HOH HOH . T 4 HOH E 13 313 4 HOH HOH . T 4 HOH E 14 314 35 HOH HOH . T 4 HOH E 15 315 48 HOH HOH . T 4 HOH E 16 316 17 HOH HOH . T 4 HOH E 17 317 113 HOH HOH . T 4 HOH E 18 318 60 HOH HOH . T 4 HOH E 19 319 103 HOH HOH . T 4 HOH E 20 320 75 HOH HOH . T 4 HOH E 21 321 90 HOH HOH . T 4 HOH E 22 322 56 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id I _atom_site.label_entity_id 3 _atom_site.Cartn_x 3.366 _atom_site.Cartn_y -4.269 _atom_site.Cartn_z -35.53 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 46.47 _atom_site.pdbx_formal_charge 2 _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 202 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 22 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 21 _model_server_stats.query_time_ms 259 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #