data_8OUO # _model_server_result.job_id hVNZtxR1Hqd_HeEkTrmbcA _model_server_result.datetime_utc '2024-10-10 01:21:13' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8ouo # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"K","auth_seq_id":801}' # _entry.id 8OUO # _exptl.entry_id 8OUO _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 875.313 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'di-heneicosanoyl phosphatidyl choline' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8OUO _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 8OUO _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 K N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 122 A CYS 122 1_555 A SG CYS 180 A CYS 180 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf2 A SG CYS 623 A CYS 623 1_555 B SG CYS 623 B CYS 623 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf3 B SG CYS 122 B CYS 122 1_555 B SG CYS 180 B CYS 180 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? # _chem_comp.formula 'C50 H101 N O8 P 1' _chem_comp.formula_weight 875.313 _chem_comp.id PLD _chem_comp.mon_nstd_flag . _chem_comp.name 'di-heneicosanoyl phosphatidyl choline' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 PLD sing 387 n n C1 O3P PLD sing 388 n n C1 H11 PLD sing 389 n n C1 H12 PLD sing 390 n n C2 C3 PLD sing 391 n n C2 O2 PLD sing 392 n n C2 H2 PLD sing 393 n n C3 O3 PLD sing 394 n n C3 H31 PLD sing 395 n n C3 H32 PLD sing 396 n n C4 C5 PLD sing 397 n n C4 O4P PLD sing 398 n n C4 H41 PLD sing 399 n n C4 H42 PLD sing 400 n n C5 N PLD sing 401 n n C5 H51 PLD sing 402 n n C5 H52 PLD sing 403 n n C6 N PLD sing 404 n n C6 H61 PLD sing 405 n n C6 H62 PLD sing 406 n n C6 H63 PLD sing 407 n n C7 N PLD sing 408 n n C7 H71 PLD sing 409 n n C7 H72 PLD sing 410 n n C7 H73 PLD sing 411 n n C8 N PLD sing 412 n n C8 H81 PLD sing 413 n n C8 H82 PLD sing 414 n n C8 H83 PLD sing 415 n n C' C1' PLD sing 416 n n C' O' PLD doub 417 n n C' O2 PLD sing 418 n n C1' C2' PLD sing 419 n n C1' "H1'1" PLD sing 420 n n C1' "H1'2" PLD sing 421 n n C2' C3' PLD sing 422 n n C2' "H2'1" PLD sing 423 n n C2' "H2'2" PLD sing 424 n n C3' C4' PLD sing 425 n n C3' "H3'1" PLD sing 426 n n C3' "H3'2" PLD sing 427 n n C4' C5' PLD sing 428 n n C4' "H4'1" PLD sing 429 n n C4' "H4'2" PLD sing 430 n n C5' C6' PLD sing 431 n n C5' "H5'1" PLD sing 432 n n C5' "H5'2" PLD sing 433 n n C6' C7' PLD sing 434 n n C6' "H6'1" PLD sing 435 n n C6' "H6'2" PLD sing 436 n n C7' C8' PLD sing 437 n n C7' "H7'1" PLD sing 438 n n C7' "H7'2" PLD sing 439 n n C8' C9' PLD sing 440 n n C8' "H8'1" PLD sing 441 n n C8' "H8'2" PLD sing 442 n n C9' CA' PLD sing 443 n n C9' "H9'1" PLD sing 444 n n C9' "H9'2" PLD sing 445 n n CA' CB' PLD sing 446 n n CA' "HT'1" PLD sing 447 n n CA' "HT'2" PLD sing 448 n n CB' CC' PLD sing 449 n n CB' "HE'1" PLD sing 450 n n CB' "HE'2" PLD sing 451 n n CB C1B PLD sing 452 n n CB OB PLD doub 453 n n CB O3 PLD sing 454 n n C1B C2B PLD sing 455 n n C1B H1A1 PLD sing 456 n n C1B H1A2 PLD sing 457 n n C2B C3B PLD sing 458 n n C2B H2A1 PLD sing 459 n n C2B H2A2 PLD sing 460 n n C3B C4B PLD sing 461 n n C3B H3A1 PLD sing 462 n n C3B H3A2 PLD sing 463 n n C4B C5B PLD sing 464 n n C4B H4A1 PLD sing 465 n n C4B H4A2 PLD sing 466 n n C5B C6B PLD sing 467 n n C5B H5A1 PLD sing 468 n n C5B H5A2 PLD sing 469 n n C6B C7B PLD sing 470 n n C6B H6A1 PLD sing 471 n n C6B H6A2 PLD sing 472 n n C7B C8B PLD sing 473 n n C7B H7A1 PLD sing 474 n n C7B H7A2 PLD sing 475 n n C8B C9B PLD sing 476 n n C8B H8A1 PLD sing 477 n n C8B H8A2 PLD sing 478 n n C9B CAA PLD sing 479 n n C9B H9A1 PLD sing 480 n n C9B H9A2 PLD sing 481 n n CAA CBA PLD sing 482 n n CAA HTA1 PLD sing 483 n n CAA HTA2 PLD sing 484 n n CBA CCA PLD sing 485 n n CBA HEA1 PLD sing 486 n n CBA HEA2 PLD sing 487 n n O1P P PLD doub 488 n n O2P P PLD sing 489 n n O2P HOP2 PLD sing 490 n n O3P P PLD sing 491 n n O4P P PLD sing 492 n n CC' CD' PLD sing 493 n n CC' "HA'1" PLD sing 494 n n CC' "HA'2" PLD sing 495 n n CD' CE' PLD sing 496 n n CD' "HB'1" PLD sing 497 n n CD' "HB'2" PLD sing 498 n n CE' CF' PLD sing 499 n n CE' "HC'1" PLD sing 500 n n CE' "HC'2" PLD sing 501 n n CF' CG' PLD sing 502 n n CF' "HD'1" PLD sing 503 n n CF' "HD'2" PLD sing 504 n n CG' CH' PLD sing 505 n n CG' "HF'1" PLD sing 506 n n CG' "HF'2" PLD sing 507 n n CH' CI' PLD sing 508 n n CH' "HG'1" PLD sing 509 n n CH' "HG'2" PLD sing 510 n n CI' CJ' PLD sing 511 n n CI' "HH'1" PLD sing 512 n n CI' "HH'2" PLD sing 513 n n CJ' CK' PLD sing 514 n n CJ' "HI'1" PLD sing 515 n n CJ' "HI'2" PLD sing 516 n n CK' "HJ'1" PLD sing 517 n n CK' "HJ'2" PLD sing 518 n n CK' "HJ'3" PLD sing 519 n n CCA CDA PLD sing 520 n n CCA HAA1 PLD sing 521 n n CCA HAA2 PLD sing 522 n n CDA CEA PLD sing 523 n n CDA HBA1 PLD sing 524 n n CDA HBA2 PLD sing 525 n n CEA CFA PLD sing 526 n n CEA HCA1 PLD sing 527 n n CEA HCA2 PLD sing 528 n n CFA CGA PLD sing 529 n n CFA HDA1 PLD sing 530 n n CFA HDA2 PLD sing 531 n n CGA CHA PLD sing 532 n n CGA HFA1 PLD sing 533 n n CGA HFA2 PLD sing 534 n n CHA CIA PLD sing 535 n n CHA HGA1 PLD sing 536 n n CHA HGA2 PLD sing 537 n n CIA CJA PLD sing 538 n n CIA HHA1 PLD sing 539 n n CIA HHA2 PLD sing 540 n n CJA CKA PLD sing 541 n n CJA HIA1 PLD sing 542 n n CJA HIA2 PLD sing 543 n n CKA HJA1 PLD sing 544 n n CKA HJA2 PLD sing 545 n n CKA HJA3 PLD sing 546 n n # _atom_sites.entry_id 8OUO _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 PLD A 1 801 801 PLD PLD . D 3 Q7G A 1 802 802 Q7G Q7G . E 4 W4E A 1 803 805 W4E S94 . F 5 PCF A 1 804 806 PCF PCF . G 6 Y01 A 1 805 807 Y01 Y01 . H 6 Y01 A 1 806 808 Y01 Y01 . I 6 Y01 A 1 807 811 Y01 Y01 . J 3 Q7G A 1 808 807 Q7G Q7G . K 2 PLD B 1 801 801 PLD PLD . L 5 PCF B 1 802 802 PCF PCF . M 6 Y01 B 1 803 804 Y01 Y01 . N 6 Y01 B 1 804 805 Y01 Y01 . O 6 Y01 B 1 805 806 Y01 Y01 . P 3 Q7G B 1 806 808 Q7G Q7G . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PLD . . . K 2 111.524 98.058 135.239 1 120.01 ? C1 PLD 801 B 1 HETATM 2 C C2 PLD . . . K 2 112.516 99.107 134.788 1 127.57 ? C2 PLD 801 B 1 HETATM 3 C C3 PLD . . . K 2 113.891 98.555 134.481 1 124.98 ? C3 PLD 801 B 1 HETATM 4 C C4 PLD . . . K 2 106.911 99.152 135.576 1 122.46 ? C4 PLD 801 B 1 HETATM 5 C C5 PLD . . . K 2 107.532 99.781 136.799 1 125.94 ? C5 PLD 801 B 1 HETATM 6 C C6 PLD . . . K 2 108.362 101.989 136.099 1 121.76 ? C6 PLD 801 B 1 HETATM 7 C C7 PLD . . . K 2 107.547 101.681 138.359 1 125.19 ? C7 PLD 801 B 1 HETATM 8 C C8 PLD . . . K 2 105.993 101.678 136.501 1 123.11 ? C8 PLD 801 B 1 HETATM 9 C C' PLD . . . K 2 111.698 101.107 133.758 1 128.53 ? C' PLD 801 B 1 HETATM 10 C C1' PLD . . . K 2 111.794 101.874 132.47 1 124.34 ? C1' PLD 801 B 1 HETATM 11 C C2' PLD . . . K 2 112.992 102.771 132.401 1 126 ? C2' PLD 801 B 1 HETATM 12 C C3' PLD . . . K 2 114.159 102.247 133.223 1 122.33 ? C3' PLD 801 B 1 HETATM 13 C C4' PLD . . . K 2 115.255 101.59 132.416 1 120.23 ? C4' PLD 801 B 1 HETATM 14 C C5' PLD . . . K 2 115.054 101.634 130.919 1 121.19 ? C5' PLD 801 B 1 HETATM 15 C C6' PLD . . . K 2 115.996 102.559 130.185 1 120.24 ? C6' PLD 801 B 1 HETATM 16 C C7' PLD . . . K 2 116.775 103.498 131.074 1 121.76 ? C7' PLD 801 B 1 HETATM 17 C C8' PLD . . . K 2 117.537 104.565 130.33 1 118.75 ? C8' PLD 801 B 1 HETATM 18 C C9' PLD . . . K 2 118.43 104.037 129.235 1 118.51 ? C9' PLD 801 B 1 HETATM 19 C CA' PLD . . . K 2 119.612 103.242 129.732 1 120.33 ? CA' PLD 801 B 1 HETATM 20 C CB' PLD . . . K 2 120.865 103.407 128.908 1 122.64 ? CB' PLD 801 B 1 HETATM 21 C CB PLD . . . K 2 115.214 97.544 136.173 1 124.88 ? CB PLD 801 B 1 HETATM 22 C C1B PLD . . . K 2 115.594 98.975 136.453 1 126.14 ? C1B PLD 801 B 1 HETATM 23 C C2B PLD . . . K 2 117.037 99.273 136.185 1 124.02 ? C2B PLD 801 B 1 HETATM 24 C C3B PLD . . . K 2 117.227 100.506 135.318 1 123.49 ? C3B PLD 801 B 1 HETATM 25 C C4B PLD . . . K 2 118.669 100.884 135.078 1 120.83 ? C4B PLD 801 B 1 HETATM 26 C C5B PLD . . . K 2 118.861 101.967 134.044 1 120.92 ? C5B PLD 801 B 1 HETATM 27 C C6B PLD . . . K 2 120.03 102.884 134.312 1 121.96 ? C6B PLD 801 B 1 HETATM 28 C C7B PLD . . . K 2 120.059 104.119 133.445 1 124.33 ? C7B PLD 801 B 1 HETATM 29 C C8B PLD . . . K 2 121.202 105.059 133.741 1 119.94 ? C8B PLD 801 B 1 HETATM 30 C C9B PLD . . . K 2 121.681 105.848 132.546 1 121.15 ? C9B PLD 801 B 1 HETATM 31 C CAA PLD . . . K 2 120.838 107.056 132.222 1 123.4 ? CAA PLD 801 B 1 HETATM 32 C CBA PLD . . . K 2 120.334 107.099 130.8 1 120.38 ? CBA PLD 801 B 1 HETATM 33 O O' PLD . . . K 2 111.394 101.587 134.818 1 128.33 ? O' PLD 801 B 1 HETATM 34 O OB PLD . . . K 2 115.788 96.589 136.625 1 121.17 ? OB PLD 801 B 1 HETATM 35 O O2 PLD . . . K 2 112.006 99.809 133.621 1 130.27 ? O2 PLD 801 B 1 HETATM 36 O O3 PLD . . . K 2 114.162 97.442 135.362 1 125.04 ? O3 PLD 801 B 1 HETATM 37 O O1P PLD . . . K 2 108.895 99.885 133.638 1 128.65 ? O1P PLD 801 B 1 HETATM 38 O O2P PLD . . . K 2 109.523 97.371 133.393 1 129.78 ? O2P PLD 801 B 1 HETATM 39 O O3P PLD . . . K 2 110.216 98.667 135.426 1 128.3 ? O3P PLD 801 B 1 HETATM 40 O O4P PLD . . . K 2 107.783 98.116 135.043 1 129.48 ? O4P PLD 801 B 1 HETATM 41 N N PLD . . . K 2 107.359 101.281 136.939 1 127.52 ? N PLD 801 B 1 HETATM 42 P P PLD . . . K 2 109.121 98.534 134.259 1 145.62 ? P PLD 801 B 1 HETATM 43 C CC' PLD . . . K 2 120.617 103.732 127.455 1 122.05 ? CC' PLD 801 B 1 HETATM 44 C CCA PLD . . . K 2 121.422 107.193 129.76 1 121.63 ? CCA PLD 801 B 1 HETATM 45 C CDA PLD . . . K 2 121.067 108.045 128.566 1 124.53 ? CDA PLD 801 B 1 HETATM 46 C CEA PLD . . . K 2 122.056 107.964 127.429 1 126.17 ? CEA PLD 801 B 1 HETATM 47 C CFA PLD . . . K 2 122.835 106.672 127.371 1 122.62 ? CFA PLD 801 B 1 HETATM 48 C CGA PLD . . . K 2 123.069 106.142 125.975 1 124.06 ? CGA PLD 801 B 1 HETATM 49 C CHA PLD . . . K 2 122.68 107.095 124.87 1 125.97 ? CHA PLD 801 B 1 HETATM 50 C CIA PLD . . . K 2 123.507 106.96 123.615 1 126.3 ? CIA PLD 801 B 1 HETATM 51 C CJA PLD . . . K 2 122.707 106.993 122.338 1 122.57 ? CJA PLD 801 B 1 HETATM 52 C CKA PLD . . . K 2 123.493 107.465 121.138 1 114.9 ? CKA PLD 801 B 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 28 _model_server_stats.query_time_ms 274 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 52 #