data_8OUO # _model_server_result.job_id h8C-YexQPuddyYcdf8kCgw _model_server_result.datetime_utc '2024-10-10 01:17:26' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8ouo # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"L","auth_seq_id":802}' # _entry.id 8OUO # _exptl.entry_id 8OUO _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 734.039 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-DIACYL-SN-GLYCERO-3-PHOSHOCHOLINE _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8OUO _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 8OUO _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 F N N ? 5 L N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 122 A CYS 122 1_555 A SG CYS 180 A CYS 180 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf2 A SG CYS 623 A CYS 623 1_555 B SG CYS 623 B CYS 623 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf3 B SG CYS 122 B CYS 122 1_555 B SG CYS 180 B CYS 180 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? # _chem_comp.formula 'C40 H80 N O8 P' _chem_comp.formula_weight 734.039 _chem_comp.id PCF _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-DIACYL-SN-GLYCERO-3-PHOSHOCHOLINE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N C12 PCF sing 235 n n N C13 PCF sing 236 n n N C14 PCF sing 237 n n N C15 PCF sing 238 n n P O11 PCF sing 239 n n P O12 PCF doub 240 n n P O13 PCF sing 241 n n P O14 PCF sing 242 n n O11 C1 PCF sing 243 n n O13 C11 PCF sing 244 n n C11 C12 PCF sing 245 n n C11 H111 PCF sing 246 n n C11 H112 PCF sing 247 n n C12 H121 PCF sing 248 n n C12 H122 PCF sing 249 n n C13 H131 PCF sing 250 n n C13 H132 PCF sing 251 n n C13 H133 PCF sing 252 n n C14 H141 PCF sing 253 n n C14 H142 PCF sing 254 n n C14 H143 PCF sing 255 n n C15 H151 PCF sing 256 n n C15 H152 PCF sing 257 n n C15 H153 PCF sing 258 n n C1 C2 PCF sing 259 n n C1 H11 PCF sing 260 n n C1 H12 PCF sing 261 n n C2 C3 PCF sing 262 n n C2 O21 PCF sing 263 n n C2 H21 PCF sing 264 n n C3 O31 PCF sing 265 n n C3 H31 PCF sing 266 n n C3 H32 PCF sing 267 n n O31 C31 PCF sing 268 n n O32 C31 PCF doub 269 n n C31 C32 PCF sing 270 n n C32 C33 PCF sing 271 n n C32 H321 PCF sing 272 n n C32 H322 PCF sing 273 n n C33 C34 PCF sing 274 n n C33 H331 PCF sing 275 n n C33 H332 PCF sing 276 n n C34 C35 PCF sing 277 n n C34 H341 PCF sing 278 n n C34 H342 PCF sing 279 n n C35 C36 PCF sing 280 n n C35 H351 PCF sing 281 n n C35 H352 PCF sing 282 n n C36 C37 PCF sing 283 n n C36 H361 PCF sing 284 n n C36 H362 PCF sing 285 n n C37 C38 PCF sing 286 n n C37 H371 PCF sing 287 n n C37 H372 PCF sing 288 n n C38 C39 PCF sing 289 n n C38 H381 PCF sing 290 n n C38 H382 PCF sing 291 n n C39 C40 PCF sing 292 n n C39 H391 PCF sing 293 n n C39 H392 PCF sing 294 n n C40 C41 PCF sing 295 n n C40 H401 PCF sing 296 n n C40 H402 PCF sing 297 n n C41 C42 PCF sing 298 n n C41 H411 PCF sing 299 n n C41 H412 PCF sing 300 n n C42 C43 PCF sing 301 n n C42 H421 PCF sing 302 n n C42 H422 PCF sing 303 n n C43 C44 PCF sing 304 n n C43 H431 PCF sing 305 n n C43 H432 PCF sing 306 n n O21 C21 PCF sing 307 n n O22 C21 PCF doub 308 n n C21 C22 PCF sing 309 n n C22 C23 PCF sing 310 n n C22 H221 PCF sing 311 n n C22 H222 PCF sing 312 n n C23 C24 PCF sing 313 n n C23 H231 PCF sing 314 n n C23 H232 PCF sing 315 n n C24 C25 PCF sing 316 n n C24 H241 PCF sing 317 n n C24 H242 PCF sing 318 n n C25 C26 PCF sing 319 n n C25 H251 PCF sing 320 n n C25 H252 PCF sing 321 n n C26 C27 PCF sing 322 n n C26 H261 PCF sing 323 n n C26 H262 PCF sing 324 n n C27 C28 PCF sing 325 n n C27 H271 PCF sing 326 n n C27 H272 PCF sing 327 n n C28 C29 PCF sing 328 n n C28 H281 PCF sing 329 n n C28 H282 PCF sing 330 n n C29 C30 PCF sing 331 n n C29 H291 PCF sing 332 n n C29 H292 PCF sing 333 n n C30 C47 PCF sing 334 n n C30 H301 PCF sing 335 n n C30 H302 PCF sing 336 n n C47 C48 PCF sing 337 n n C47 H471 PCF sing 338 n n C47 H472 PCF sing 339 n n C48 C49 PCF sing 340 n n C48 H481 PCF sing 341 n n C48 H482 PCF sing 342 n n C49 C50 PCF sing 343 n n C49 H491 PCF sing 344 n n C49 H492 PCF sing 345 n n C50 C51 PCF sing 346 n n C50 H501 PCF sing 347 n n C50 H502 PCF sing 348 n n C51 C52 PCF sing 349 n n C51 H511 PCF sing 350 n n C51 H512 PCF sing 351 n n C52 H521 PCF sing 352 n n C52 H522 PCF sing 353 n n C52 H523 PCF sing 354 n n C44 C45 PCF sing 355 n n C44 H441 PCF sing 356 n n C44 H442 PCF sing 357 n n C45 C46 PCF sing 358 n n C45 H451 PCF sing 359 n n C45 H452 PCF sing 360 n n C46 H461 PCF sing 361 n n C46 H462 PCF sing 362 n n C46 H463 PCF sing 363 n n # _atom_sites.entry_id 8OUO _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 PLD A 1 801 801 PLD PLD . D 3 Q7G A 1 802 802 Q7G Q7G . E 4 W4E A 1 803 805 W4E S94 . F 5 PCF A 1 804 806 PCF PCF . G 6 Y01 A 1 805 807 Y01 Y01 . H 6 Y01 A 1 806 808 Y01 Y01 . I 6 Y01 A 1 807 811 Y01 Y01 . J 3 Q7G A 1 808 807 Q7G Q7G . K 2 PLD B 1 801 801 PLD PLD . L 5 PCF B 1 802 802 PCF PCF . M 6 Y01 B 1 803 804 Y01 Y01 . N 6 Y01 B 1 804 805 Y01 Y01 . O 6 Y01 B 1 805 806 Y01 Y01 . P 3 Q7G B 1 806 808 Q7G Q7G . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N PCF . . . L 5 109.254 108.701 147.216 1 117.43 ? N PCF 802 B 1 HETATM 2 P P PCF . . . L 5 111.702 111.829 144.791 1 132.03 ? P PCF 802 B 1 HETATM 3 O O11 PCF . . . L 5 113.162 111.889 145.458 1 112.94 ? O11 PCF 802 B 1 HETATM 4 O O12 PCF . . . L 5 111.196 113.238 144.646 1 113.86 ? O12 PCF 802 B 1 HETATM 5 O O13 PCF . . . L 5 110.827 111.101 145.924 1 120.17 ? O13 PCF 802 B 1 HETATM 6 O O14 PCF . . . L 5 111.761 110.927 143.589 1 114.27 ? O14 PCF 802 B 1 HETATM 7 C C11 PCF . . . L 5 109.449 110.732 145.635 1 109.84 ? C11 PCF 802 B 1 HETATM 8 C C12 PCF . . . L 5 108.785 110.091 146.83 1 114.34 ? C12 PCF 802 B 1 HETATM 9 C C13 PCF . . . L 5 108.317 108.118 148.214 1 113.41 ? C13 PCF 802 B 1 HETATM 10 C C14 PCF . . . L 5 109.287 107.824 146.015 1 109.08 ? C14 PCF 802 B 1 HETATM 11 C C15 PCF . . . L 5 110.614 108.753 147.819 1 107.84 ? C15 PCF 802 B 1 HETATM 12 C C1 PCF . . . L 5 114.26 112.496 144.723 1 110.96 ? C1 PCF 802 B 1 HETATM 13 C C2 PCF . . . L 5 115.487 112.529 145.608 1 113.63 ? C2 PCF 802 B 1 HETATM 14 C C3 PCF . . . L 5 115.901 111.174 146.137 1 108.95 ? C3 PCF 802 B 1 HETATM 15 O O31 PCF . . . L 5 116.995 111.374 147.059 1 115.23 ? O31 PCF 802 B 1 HETATM 16 O O32 PCF . . . L 5 117.259 109.168 147.235 1 107.25 ? O32 PCF 802 B 1 HETATM 17 C C31 PCF . . . L 5 117.525 110.282 147.601 1 110.89 ? C31 PCF 802 B 1 HETATM 18 C C32 PCF . . . L 5 118.437 110.63 148.744 1 106.23 ? C32 PCF 802 B 1 HETATM 19 C C33 PCF . . . L 5 119.879 110.316 148.489 1 103.9 ? C33 PCF 802 B 1 HETATM 20 C C34 PCF . . . L 5 120.469 111.156 147.37 1 98.25 ? C34 PCF 802 B 1 HETATM 21 C C35 PCF . . . L 5 121.977 111.229 147.377 1 105.19 ? C35 PCF 802 B 1 HETATM 22 C C36 PCF . . . L 5 122.56 112.054 146.256 1 109.6 ? C36 PCF 802 B 1 HETATM 23 C C37 PCF . . . L 5 123.965 112.546 146.509 1 108.17 ? C37 PCF 802 B 1 HETATM 24 C C38 PCF . . . L 5 125.016 111.465 146.553 1 102.17 ? C38 PCF 802 B 1 HETATM 25 C C39 PCF . . . L 5 126.402 111.974 146.871 1 108.29 ? C39 PCF 802 B 1 HETATM 26 C C40 PCF . . . L 5 127.471 110.909 146.892 1 110.17 ? C40 PCF 802 B 1 HETATM 27 C C41 PCF . . . L 5 127.795 110.328 145.538 1 108.65 ? C41 PCF 802 B 1 HETATM 28 C C42 PCF . . . L 5 128.344 111.329 144.551 1 101.1 ? C42 PCF 802 B 1 HETATM 29 C C43 PCF . . . L 5 128.698 110.744 143.207 1 104.68 ? C43 PCF 802 B 1 HETATM 30 O O21 PCF . . . L 5 116.644 113.134 144.957 1 115.47 ? O21 PCF 802 B 1 HETATM 31 O O22 PCF . . . L 5 116.657 111.788 143.143 1 105.19 ? O22 PCF 802 B 1 HETATM 32 C C21 PCF . . . L 5 117.231 112.501 143.924 1 107.25 ? C21 PCF 802 B 1 HETATM 33 C C22 PCF . . . L 5 118.714 112.743 143.9 1 102.99 ? C22 PCF 802 B 1 HETATM 34 C C23 PCF . . . L 5 119.087 114.192 143.92 1 101.7 ? C23 PCF 802 B 1 HETATM 35 C C24 PCF . . . L 5 120.554 114.406 144.25 1 104.07 ? C24 PCF 802 B 1 HETATM 36 C C25 PCF . . . L 5 120.947 115.851 144.434 1 108.09 ? C25 PCF 802 B 1 HETATM 37 C C26 PCF . . . L 5 121.147 116.611 143.147 1 108.1 ? C26 PCF 802 B 1 HETATM 38 C C27 PCF . . . L 5 122.402 116.235 142.398 1 112.24 ? C27 PCF 802 B 1 HETATM 39 C C28 PCF . . . L 5 123.678 116.482 143.164 1 110.14 ? C28 PCF 802 B 1 HETATM 40 C C29 PCF . . . L 5 124.935 116.155 142.397 1 104.4 ? C29 PCF 802 B 1 HETATM 41 C C44 PCF . . . L 5 129.189 111.755 142.2 1 104.92 ? C44 PCF 802 B 1 HETATM 42 C C45 PCF . . . L 5 128.19 112.83 141.857 1 107.45 ? C45 PCF 802 B 1 HETATM 43 C C46 PCF . . . L 5 128.683 113.81 140.819 1 104.88 ? C46 PCF 802 B 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 28 _model_server_stats.query_time_ms 288 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 43 #