data_8OW7 # _model_server_result.job_id tneaBKx2yUuxpCjVwhfVXw _model_server_result.datetime_utc '2024-11-28 21:56:15' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8ow7 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"W","auth_seq_id":301}' # _entry.id 8OW7 # _exptl.entry_id 8OW7 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 293.27 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'N-acetyl-beta-muramic acid' _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 8OW7 _cell.length_a 143.75 _cell.length_b 143.75 _cell.length_c 210.95 _cell.Z_PDB 36 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8OW7 _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 31 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? dimeric 2 author_defined_assembly 1 ? dimeric 2 author_defined_assembly 2 ? dimeric 2 author_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,G,H,I,J,K,P,Q,R 1 1 B,F,L,M,N,O,W,X,Y 2 1 D,E,S,T,U,V 3 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 G N N ? 2 L N N ? 2 P N N ? 2 S N N ? 2 U N N ? 2 W N N # _chem_comp.formula 'C11 H19 N O8' _chem_comp.formula_weight 293.27 _chem_comp.id AMU _chem_comp.mon_nstd_flag . _chem_comp.name 'N-acetyl-beta-muramic acid' _chem_comp.type 'd-saccharide, beta linking' _chem_comp.pdbx_synonyms 'N-acetyl-muramic acid;BETA-N-ACETYLMURAMIC ACID' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 AMU sing 13 n n C1 O1 AMU sing 14 n n C1 O5 AMU sing 15 n n C1 H1 AMU sing 16 n n C2 C3 AMU sing 17 n n C2 N2 AMU sing 18 n n C2 H2 AMU sing 19 n n C3 C4 AMU sing 20 n n C3 O3 AMU sing 21 n n C3 H3 AMU sing 22 n n C4 C5 AMU sing 23 n n C4 O4 AMU sing 24 n n C4 H4 AMU sing 25 n n C5 C6 AMU sing 26 n n C5 O5 AMU sing 27 n n C5 H5 AMU sing 28 n n C6 O6 AMU sing 29 n n C6 H61 AMU sing 30 n n C6 H62 AMU sing 31 n n C7 C8 AMU sing 32 n n C7 O7 AMU doub 33 n n C7 N2 AMU sing 34 n n C8 H81 AMU sing 35 n n C8 H82 AMU sing 36 n n C8 H83 AMU sing 37 n n C9 C10 AMU sing 38 n n C9 C11 AMU sing 39 n n C9 O3 AMU sing 40 n n C9 H9 AMU sing 41 n n C10 O10 AMU doub 42 n n C10 O11 AMU sing 43 n n C11 H111 AMU sing 44 n n C11 H112 AMU sing 45 n n C11 H113 AMU sing 46 n n O1 HO1 AMU sing 47 n n O4 HO4 AMU sing 48 n n O6 HO6 AMU sing 49 n n O11 HO11 AMU sing 50 n n N2 HN2 AMU sing 51 n n # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.identifier _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version AMU b-D-GlcpNAc3 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1 AMU MurNAc 'SNFG CARBOHYDRATE SYMBOL' GMML 1 # _atom_sites.entry_id 8OW7 _atom_sites.fract_transf_matrix[1][1] 0.006957 _atom_sites.fract_transf_matrix[1][2] 0.004016 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008033 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00474 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 2 AMU A 1 301 301 AMU AMU . H 3 SO4 A 1 302 6 SO4 SO4 . I 3 SO4 A 1 303 14 SO4 SO4 . J 3 SO4 A 1 304 17 SO4 SO4 . K 3 SO4 A 1 305 19 SO4 SO4 . L 2 AMU B 1 301 301 AMU AMU . M 3 SO4 B 1 302 15 SO4 SO4 . N 3 SO4 B 1 303 16 SO4 SO4 . O 3 SO4 B 1 304 22 SO4 SO4 . P 2 AMU C 1 301 301 AMU AMU . Q 3 SO4 C 1 302 3 SO4 SO4 . R 3 SO4 C 1 303 13 SO4 SO4 . S 2 AMU D 1 301 301 AMU AMU . T 3 SO4 D 1 302 20 SO4 SO4 . U 2 AMU E 1 301 301 AMU AMU . V 3 SO4 E 1 302 10 SO4 SO4 . W 2 AMU F 1 301 301 AMU AMU . X 3 SO4 F 1 302 12 SO4 SO4 . Y 3 SO4 F 1 303 21 SO4 SO4 . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 AMU . . . W 2 74.285 -62.579 8.279 1 77.54 0 C1 AMU 301 F 1 HETATM 2 C C2 AMU . . . W 2 75.402 -61.746 7.648 1 75.23 0 C2 AMU 301 F 1 HETATM 3 C C3 AMU . . . W 2 76.185 -62.617 6.67 1 78.26 0 C3 AMU 301 F 1 HETATM 4 C C4 AMU . . . W 2 76.716 -63.857 7.38 1 78.14 0 C4 AMU 301 F 1 HETATM 5 C C5 AMU . . . W 2 75.575 -64.597 8.078 1 78.57 0 C5 AMU 301 F 1 HETATM 6 C C6 AMU . . . W 2 76.055 -65.743 8.94 1 78.73 0 C6 AMU 301 F 1 HETATM 7 C C7 AMU . . . W 2 75.041 -59.326 7.625 1 65.46 0 C7 AMU 301 F 1 HETATM 8 C C8 AMU . . . W 2 74.111 -58.26 7.134 1 62.47 0 C8 AMU 301 F 1 HETATM 9 C C9 AMU . . . W 2 77.562 -62.016 4.77 1 77.12 0 C9 AMU 301 F 1 HETATM 10 C C10 AMU . . . W 2 76.437 -61.512 3.855 1 79.03 0 C10 AMU 301 F 1 HETATM 11 C C11 AMU . . . W 2 78.871 -61.313 4.493 1 72.69 0 C11 AMU 301 F 1 HETATM 12 O O1 AMU . . . W 2 73.574 -61.789 9.181 1 88.26 0 O1 AMU 301 F 1 HETATM 13 O O3 AMU . . . W 2 77.263 -61.828 6.159 1 76.9 0 O3 AMU 301 F 1 HETATM 14 O O4 AMU . . . W 2 77.338 -64.735 6.445 1 81.04 0 O4 AMU 301 F 1 HETATM 15 O O5 AMU . . . W 2 74.853 -63.697 8.946 1 78.89 0 O5 AMU 301 F 1 HETATM 16 O O6 AMU . . . W 2 76.8 -65.278 10.065 1 82.31 0 O6 AMU 301 F 1 HETATM 17 O O7 AMU . . . W 2 75.859 -59.111 8.514 1 65.81 0 O7 AMU 301 F 1 HETATM 18 O O10 AMU . . . W 2 76.333 -62.048 2.733 1 78.48 0 O10 AMU 301 F 1 HETATM 19 O O11 AMU . . . W 2 75.702 -60.601 4.288 1 82.85 0 O11 AMU 301 F 1 HETATM 20 N N2 AMU . . . W 2 74.927 -60.521 7.039 1 69.66 0 N2 AMU 301 F 1 # _model_server_stats.io_time_ms 31 _model_server_stats.parse_time_ms 15 _model_server_stats.create_model_time_ms 25 _model_server_stats.query_time_ms 286 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 20 #