data_8OXE # _model_server_result.job_id Vx2jqA2GKXpqMakIU_Ubuw _model_server_result.datetime_utc '2024-11-16 16:42:10' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8oxe # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":403}' # _entry.id 8OXE # _exptl.entry_id 8OXE _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8OXE _cell.length_a 89.61 _cell.length_b 140.77 _cell.length_c 55.56 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8OXE _symmetry.cell_setting ? _symmetry.Int_Tables_number 21 _symmetry.space_group_name_Hall 'C 2 2' _symmetry.space_group_name_H-M 'C 2 2 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N ? 3 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASP 46 A ASP 44 1_555 C MG MG . A MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.116 ? metalc ? metalc2 A OD1 ASP 46 A ASP 44 1_555 C MG MG . A MG 402 6_445 ? ? ? ? ? ? ? ? ? ? ? ? 2.116 ? metalc ? metalc3 A OD2 ASP 48 A ASP 46 1_555 C MG MG . A MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.21 ? metalc ? metalc4 A OD2 ASP 48 A ASP 46 1_555 C MG MG . A MG 402 6_445 ? ? ? ? ? ? ? ? ? ? ? ? 2.21 ? metalc ? metalc5 A OD2 ASP 276 A ASP 274 1_555 D MG MG . A MG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.228 ? metalc ? metalc6 A OD2 ASP 291 A ASP 289 1_555 D MG MG . A MG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.227 ? metalc ? metalc7 A OD1 ASP 291 A ASP 289 1_555 E MG MG . A MG 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.441 ? metalc ? metalc8 A OD2 ASP 291 A ASP 289 1_555 E MG MG . A MG 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.627 ? metalc ? metalc9 A OD1 ASN 293 A ASN 291 1_555 E MG MG . A MG 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.191 ? metalc ? metalc10 B O3B ADP . A ADP 401 1_555 D MG MG . A MG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.212 ? metalc ? metalc11 B O2A ADP . A ADP 401 1_555 D MG MG . A MG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.129 ? metalc ? metalc12 B O2B ADP . A ADP 401 1_555 E MG MG . A MG 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.125 ? metalc ? metalc13 C MG MG . A MG 402 1_555 F O HOH . A HOH 608 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.661 ? metalc ? metalc14 C MG MG . A MG 402 1_555 F O HOH . A HOH 608 6_445 ? ? ? ? ? ? ? ? ? ? ? ? 2.661 ? metalc ? metalc15 D MG MG . A MG 403 1_555 F O HOH . A HOH 502 3_556 ? ? ? ? ? ? ? ? ? ? ? ? 2.235 ? metalc ? metalc16 D MG MG . A MG 403 1_555 F O HOH . A HOH 522 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.261 ? metalc ? metalc17 E MG MG . A MG 404 1_555 F O HOH . A HOH 531 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.857 ? metalc ? metalc18 E MG MG . A MG 404 1_555 F O HOH . A HOH 576 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.56 ? metalc ? metalc19 E MG MG . A MG 404 1_555 F O HOH . A HOH 577 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.626 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 8OXE _atom_sites.fract_transf_matrix[1][1] 0.011159 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007104 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.017999 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ADP A 1 401 1 ADP ADP . C 3 MG A 1 402 1 MG MG . D 3 MG A 1 403 2 MG MG . E 3 MG A 1 404 3 MG MG . F 4 HOH A 1 501 28 HOH HOH . F 4 HOH A 2 502 124 HOH HOH . F 4 HOH A 3 503 98 HOH HOH . F 4 HOH A 4 504 90 HOH HOH . F 4 HOH A 5 505 15 HOH HOH . F 4 HOH A 6 506 64 HOH HOH . F 4 HOH A 7 507 67 HOH HOH . F 4 HOH A 8 508 107 HOH HOH . F 4 HOH A 9 509 115 HOH HOH . F 4 HOH A 10 510 76 HOH HOH . F 4 HOH A 11 511 37 HOH HOH . F 4 HOH A 12 512 93 HOH HOH . F 4 HOH A 13 513 31 HOH HOH . F 4 HOH A 14 514 2 HOH HOH . F 4 HOH A 15 515 30 HOH HOH . F 4 HOH A 16 516 8 HOH HOH . F 4 HOH A 17 517 117 HOH HOH . F 4 HOH A 18 518 20 HOH HOH . F 4 HOH A 19 519 119 HOH HOH . F 4 HOH A 20 520 25 HOH HOH . F 4 HOH A 21 521 71 HOH HOH . F 4 HOH A 22 522 81 HOH HOH . F 4 HOH A 23 523 27 HOH HOH . F 4 HOH A 24 524 24 HOH HOH . F 4 HOH A 25 525 46 HOH HOH . F 4 HOH A 26 526 55 HOH HOH . F 4 HOH A 27 527 13 HOH HOH . F 4 HOH A 28 528 9 HOH HOH . F 4 HOH A 29 529 63 HOH HOH . F 4 HOH A 30 530 16 HOH HOH . F 4 HOH A 31 531 94 HOH HOH . F 4 HOH A 32 532 10 HOH HOH . F 4 HOH A 33 533 36 HOH HOH . F 4 HOH A 34 534 74 HOH HOH . F 4 HOH A 35 535 91 HOH HOH . F 4 HOH A 36 536 60 HOH HOH . F 4 HOH A 37 537 110 HOH HOH . F 4 HOH A 38 538 1 HOH HOH . F 4 HOH A 39 539 100 HOH HOH . F 4 HOH A 40 540 54 HOH HOH . F 4 HOH A 41 541 70 HOH HOH . F 4 HOH A 42 542 17 HOH HOH . F 4 HOH A 43 543 32 HOH HOH . F 4 HOH A 44 544 7 HOH HOH . F 4 HOH A 45 545 50 HOH HOH . F 4 HOH A 46 546 6 HOH HOH . F 4 HOH A 47 547 79 HOH HOH . F 4 HOH A 48 548 26 HOH HOH . F 4 HOH A 49 549 86 HOH HOH . F 4 HOH A 50 550 73 HOH HOH . F 4 HOH A 51 551 11 HOH HOH . F 4 HOH A 52 552 12 HOH HOH . F 4 HOH A 53 553 53 HOH HOH . F 4 HOH A 54 554 5 HOH HOH . F 4 HOH A 55 555 104 HOH HOH . F 4 HOH A 56 556 4 HOH HOH . F 4 HOH A 57 557 19 HOH HOH . F 4 HOH A 58 558 80 HOH HOH . F 4 HOH A 59 559 61 HOH HOH . F 4 HOH A 60 560 14 HOH HOH . F 4 HOH A 61 561 3 HOH HOH . F 4 HOH A 62 562 62 HOH HOH . F 4 HOH A 63 563 51 HOH HOH . F 4 HOH A 64 564 65 HOH HOH . F 4 HOH A 65 565 85 HOH HOH . F 4 HOH A 66 566 38 HOH HOH . F 4 HOH A 67 567 42 HOH HOH . F 4 HOH A 68 568 45 HOH HOH . F 4 HOH A 69 569 39 HOH HOH . F 4 HOH A 70 570 69 HOH HOH . F 4 HOH A 71 571 78 HOH HOH . F 4 HOH A 72 572 66 HOH HOH . F 4 HOH A 73 573 59 HOH HOH . F 4 HOH A 74 574 96 HOH HOH . F 4 HOH A 75 575 56 HOH HOH . F 4 HOH A 76 576 83 HOH HOH . F 4 HOH A 77 577 88 HOH HOH . F 4 HOH A 78 578 22 HOH HOH . F 4 HOH A 79 579 103 HOH HOH . F 4 HOH A 80 580 95 HOH HOH . F 4 HOH A 81 581 68 HOH HOH . F 4 HOH A 82 582 111 HOH HOH . F 4 HOH A 83 583 82 HOH HOH . F 4 HOH A 84 584 99 HOH HOH . F 4 HOH A 85 585 114 HOH HOH . F 4 HOH A 86 586 34 HOH HOH . F 4 HOH A 87 587 122 HOH HOH . F 4 HOH A 88 588 58 HOH HOH . F 4 HOH A 89 589 57 HOH HOH . F 4 HOH A 90 590 44 HOH HOH . F 4 HOH A 91 591 41 HOH HOH . F 4 HOH A 92 592 75 HOH HOH . F 4 HOH A 93 593 18 HOH HOH . F 4 HOH A 94 594 43 HOH HOH . F 4 HOH A 95 595 121 HOH HOH . F 4 HOH A 96 596 87 HOH HOH . F 4 HOH A 97 597 29 HOH HOH . F 4 HOH A 98 598 109 HOH HOH . F 4 HOH A 99 599 49 HOH HOH . F 4 HOH A 100 600 89 HOH HOH . F 4 HOH A 101 601 21 HOH HOH . F 4 HOH A 102 602 77 HOH HOH . F 4 HOH A 103 603 123 HOH HOH . F 4 HOH A 104 604 105 HOH HOH . F 4 HOH A 105 605 72 HOH HOH . F 4 HOH A 106 606 112 HOH HOH . F 4 HOH A 107 607 102 HOH HOH . F 4 HOH A 108 608 48 HOH HOH . F 4 HOH A 109 609 116 HOH HOH . F 4 HOH A 110 610 35 HOH HOH . F 4 HOH A 111 611 113 HOH HOH . F 4 HOH A 112 612 40 HOH HOH . F 4 HOH A 113 613 84 HOH HOH . F 4 HOH A 114 614 33 HOH HOH . F 4 HOH A 115 615 97 HOH HOH . F 4 HOH A 116 616 52 HOH HOH . F 4 HOH A 117 617 120 HOH HOH . F 4 HOH A 118 618 108 HOH HOH . F 4 HOH A 119 619 101 HOH HOH . F 4 HOH A 120 620 47 HOH HOH . F 4 HOH A 121 621 92 HOH HOH . F 4 HOH A 122 622 106 HOH HOH . F 4 HOH A 123 623 118 HOH HOH . F 4 HOH A 124 624 23 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 3 _atom_site.Cartn_x -13.765 _atom_site.Cartn_y -18.106 _atom_site.Cartn_z 23.555 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 13.91 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 403 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 25 _model_server_stats.parse_time_ms 33 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 373 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #