data_8OXN
#
_model_server_result.job_id            n2mw63hokx0u3Qd3M5nEmA 
_model_server_result.datetime_utc      '2024-11-23 05:33:10' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8oxn 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"G","auth_seq_id":302}' 
#
_entry.id    8OXN 
#
_exptl.entry_id    8OXN 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            8OXN 
_cell.length_a            44.8 
_cell.length_b            167.79 
_cell.length_c            167.91 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8OXN 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
? monomeric 1 author_defined_assembly 3 
? monomeric 1 author_defined_assembly 4 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,E,M 1 1 
B,F,G,N 2 1 
C,H,I,J,O 3 1 
D,K,L,P 4 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 G N N 
? 3 J N N 
? 3 L N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 49 AAA CYS 37 1_555 A SG CYS 196 AAA CYS 184 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.087 ? 
disulf ? disulf2 B SG CYS 49 BBB CYS 37 1_555 B SG CYS 196 BBB CYS 184 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.073 ? 
disulf ? disulf3 C SG CYS 49 CCC CYS 37 1_555 C SG CYS 196 CCC CYS 184 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.113 ? 
disulf ? disulf4 D SG CYS 49 DDD CYS 37 1_555 D SG CYS 196 DDD CYS 184 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.089 ? 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 129 n n 
C1 C2 GOL sing 130 n n 
C1 H11 GOL sing 131 n n 
C1 H12 GOL sing 132 n n 
O1 HO1 GOL sing 133 n n 
C2 O2 GOL sing 134 n n 
C2 C3 GOL sing 135 n n 
C2 H2 GOL sing 136 n n 
O2 HO2 GOL sing 137 n n 
C3 O3 GOL sing 138 n n 
C3 H31 GOL sing 139 n n 
C3 H32 GOL sing 140 n n 
O3 HO3 GOL sing 141 n n 
#
_atom_sites.entry_id                     8OXN 
_atom_sites.fract_transf_matrix[1][1]    0.022321 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.00596 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.005956 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 VFH AAA 1 301 301 VFH LSU . 
F 2 VFH BBB 1 301 301 VFH LSU . 
G 3 GOL BBB 1 302 4 GOL GOL . 
H 2 VFH CCC 1 301 301 VFH LSU . 
I 4 SRT CCC 1 302 2 SRT SRT . 
J 3 GOL CCC 1 303 3 GOL GOL . 
K 2 VFH DDD 1 301 301 VFH LSU . 
L 3 GOL DDD 1 302 1 GOL GOL . 
M 5 HOH AAA 1 401 80 HOH HOH . 
M 5 HOH AAA 2 402 129 HOH HOH . 
M 5 HOH AAA 3 403 140 HOH HOH . 
M 5 HOH AAA 4 404 144 HOH HOH . 
M 5 HOH AAA 5 405 1 HOH HOH . 
M 5 HOH AAA 6 406 126 HOH HOH . 
M 5 HOH AAA 7 407 32 HOH HOH . 
M 5 HOH AAA 8 408 48 HOH HOH . 
M 5 HOH AAA 9 409 98 HOH HOH . 
M 5 HOH AAA 10 410 53 HOH HOH . 
M 5 HOH AAA 11 411 67 HOH HOH . 
M 5 HOH AAA 12 412 119 HOH HOH . 
M 5 HOH AAA 13 413 36 HOH HOH . 
M 5 HOH AAA 14 414 52 HOH HOH . 
M 5 HOH AAA 15 415 49 HOH HOH . 
M 5 HOH AAA 16 416 107 HOH HOH . 
M 5 HOH AAA 17 417 60 HOH HOH . 
M 5 HOH AAA 18 418 74 HOH HOH . 
M 5 HOH AAA 19 419 84 HOH HOH . 
M 5 HOH AAA 20 420 6 HOH HOH . 
M 5 HOH AAA 21 421 70 HOH HOH . 
M 5 HOH AAA 22 422 69 HOH HOH . 
M 5 HOH AAA 23 423 169 HOH HOH . 
M 5 HOH AAA 24 424 11 HOH HOH . 
M 5 HOH AAA 25 425 2 HOH HOH . 
M 5 HOH AAA 26 426 22 HOH HOH . 
M 5 HOH AAA 27 427 116 HOH HOH . 
M 5 HOH AAA 28 428 50 HOH HOH . 
M 5 HOH AAA 29 429 170 HOH HOH . 
M 5 HOH AAA 30 430 55 HOH HOH . 
M 5 HOH AAA 31 431 57 HOH HOH . 
M 5 HOH AAA 32 432 143 HOH HOH . 
M 5 HOH AAA 33 433 133 HOH HOH . 
M 5 HOH AAA 34 434 77 HOH HOH . 
M 5 HOH AAA 35 435 83 HOH HOH . 
M 5 HOH AAA 36 436 132 HOH HOH . 
M 5 HOH AAA 37 437 167 HOH HOH . 
M 5 HOH AAA 38 438 150 HOH HOH . 
M 5 HOH AAA 39 439 161 HOH HOH . 
N 5 HOH BBB 1 401 76 HOH HOH . 
N 5 HOH BBB 2 402 138 HOH HOH . 
N 5 HOH BBB 3 403 171 HOH HOH . 
N 5 HOH BBB 4 404 19 HOH HOH . 
N 5 HOH BBB 5 405 136 HOH HOH . 
N 5 HOH BBB 6 406 33 HOH HOH . 
N 5 HOH BBB 7 407 108 HOH HOH . 
N 5 HOH BBB 8 408 9 HOH HOH . 
N 5 HOH BBB 9 409 5 HOH HOH . 
N 5 HOH BBB 10 410 8 HOH HOH . 
N 5 HOH BBB 11 411 111 HOH HOH . 
N 5 HOH BBB 12 412 26 HOH HOH . 
N 5 HOH BBB 13 413 68 HOH HOH . 
N 5 HOH BBB 14 414 120 HOH HOH . 
N 5 HOH BBB 15 415 157 HOH HOH . 
N 5 HOH BBB 16 416 153 HOH HOH . 
N 5 HOH BBB 17 417 47 HOH HOH . 
N 5 HOH BBB 18 418 139 HOH HOH . 
N 5 HOH BBB 19 419 66 HOH HOH . 
N 5 HOH BBB 20 420 96 HOH HOH . 
N 5 HOH BBB 21 421 59 HOH HOH . 
N 5 HOH BBB 22 422 154 HOH HOH . 
N 5 HOH BBB 23 423 16 HOH HOH . 
N 5 HOH BBB 24 424 147 HOH HOH . 
N 5 HOH BBB 25 425 148 HOH HOH . 
N 5 HOH BBB 26 426 165 HOH HOH . 
N 5 HOH BBB 27 427 130 HOH HOH . 
N 5 HOH BBB 28 428 125 HOH HOH . 
N 5 HOH BBB 29 429 137 HOH HOH . 
N 5 HOH BBB 30 430 124 HOH HOH . 
N 5 HOH BBB 31 431 89 HOH HOH . 
N 5 HOH BBB 32 432 110 HOH HOH . 
N 5 HOH BBB 33 433 12 HOH HOH . 
N 5 HOH BBB 34 434 62 HOH HOH . 
N 5 HOH BBB 35 435 101 HOH HOH . 
N 5 HOH BBB 36 436 94 HOH HOH . 
N 5 HOH BBB 37 437 135 HOH HOH . 
N 5 HOH BBB 38 438 85 HOH HOH . 
N 5 HOH BBB 39 439 31 HOH HOH . 
N 5 HOH BBB 40 440 105 HOH HOH . 
N 5 HOH BBB 41 441 28 HOH HOH . 
N 5 HOH BBB 42 442 65 HOH HOH . 
N 5 HOH BBB 43 443 3 HOH HOH . 
N 5 HOH BBB 44 444 115 HOH HOH . 
N 5 HOH BBB 45 445 145 HOH HOH . 
N 5 HOH BBB 46 446 166 HOH HOH . 
O 5 HOH CCC 1 401 127 HOH HOH . 
O 5 HOH CCC 2 402 109 HOH HOH . 
O 5 HOH CCC 3 403 21 HOH HOH . 
O 5 HOH CCC 4 404 23 HOH HOH . 
O 5 HOH CCC 5 405 45 HOH HOH . 
O 5 HOH CCC 6 406 90 HOH HOH . 
O 5 HOH CCC 7 407 42 HOH HOH . 
O 5 HOH CCC 8 408 13 HOH HOH . 
O 5 HOH CCC 9 409 71 HOH HOH . 
O 5 HOH CCC 10 410 24 HOH HOH . 
O 5 HOH CCC 11 411 95 HOH HOH . 
O 5 HOH CCC 12 412 40 HOH HOH . 
O 5 HOH CCC 13 413 118 HOH HOH . 
O 5 HOH CCC 14 414 7 HOH HOH . 
O 5 HOH CCC 15 415 39 HOH HOH . 
O 5 HOH CCC 16 416 43 HOH HOH . 
O 5 HOH CCC 17 417 18 HOH HOH . 
O 5 HOH CCC 18 418 64 HOH HOH . 
O 5 HOH CCC 19 419 81 HOH HOH . 
O 5 HOH CCC 20 420 54 HOH HOH . 
O 5 HOH CCC 21 421 106 HOH HOH . 
O 5 HOH CCC 22 422 87 HOH HOH . 
O 5 HOH CCC 23 423 151 HOH HOH . 
O 5 HOH CCC 24 424 122 HOH HOH . 
O 5 HOH CCC 25 425 51 HOH HOH . 
O 5 HOH CCC 26 426 114 HOH HOH . 
O 5 HOH CCC 27 427 46 HOH HOH . 
O 5 HOH CCC 28 428 73 HOH HOH . 
O 5 HOH CCC 29 429 79 HOH HOH . 
O 5 HOH CCC 30 430 103 HOH HOH . 
O 5 HOH CCC 31 431 149 HOH HOH . 
O 5 HOH CCC 32 432 141 HOH HOH . 
O 5 HOH CCC 33 433 158 HOH HOH . 
O 5 HOH CCC 34 434 142 HOH HOH . 
O 5 HOH CCC 35 435 160 HOH HOH . 
P 5 HOH DDD 1 401 92 HOH HOH . 
P 5 HOH DDD 2 402 100 HOH HOH . 
P 5 HOH DDD 3 403 123 HOH HOH . 
P 5 HOH DDD 4 404 159 HOH HOH . 
P 5 HOH DDD 5 405 14 HOH HOH . 
P 5 HOH DDD 6 406 17 HOH HOH . 
P 5 HOH DDD 7 407 20 HOH HOH . 
P 5 HOH DDD 8 408 82 HOH HOH . 
P 5 HOH DDD 9 409 37 HOH HOH . 
P 5 HOH DDD 10 410 25 HOH HOH . 
P 5 HOH DDD 11 411 113 HOH HOH . 
P 5 HOH DDD 12 412 104 HOH HOH . 
P 5 HOH DDD 13 413 34 HOH HOH . 
P 5 HOH DDD 14 414 97 HOH HOH . 
P 5 HOH DDD 15 415 44 HOH HOH . 
P 5 HOH DDD 16 416 75 HOH HOH . 
P 5 HOH DDD 17 417 38 HOH HOH . 
P 5 HOH DDD 18 418 99 HOH HOH . 
P 5 HOH DDD 19 419 91 HOH HOH . 
P 5 HOH DDD 20 420 128 HOH HOH . 
P 5 HOH DDD 21 421 131 HOH HOH . 
P 5 HOH DDD 22 422 86 HOH HOH . 
P 5 HOH DDD 23 423 29 HOH HOH . 
P 5 HOH DDD 24 424 164 HOH HOH . 
P 5 HOH DDD 25 425 134 HOH HOH . 
P 5 HOH DDD 26 426 78 HOH HOH . 
P 5 HOH DDD 27 427 102 HOH HOH . 
P 5 HOH DDD 28 428 121 HOH HOH . 
P 5 HOH DDD 29 429 4 HOH HOH . 
P 5 HOH DDD 30 430 63 HOH HOH . 
P 5 HOH DDD 31 431 163 HOH HOH . 
P 5 HOH DDD 32 432 93 HOH HOH . 
P 5 HOH DDD 33 433 162 HOH HOH . 
P 5 HOH DDD 34 434 156 HOH HOH . 
P 5 HOH DDD 35 435 146 HOH HOH . 
P 5 HOH DDD 36 436 152 HOH HOH . 
P 5 HOH DDD 37 437 168 HOH HOH . 
P 5 HOH DDD 38 438 155 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . G 3 -37.394 13.266 -41.214 1 24.03 0 C1 GOL 302 BBB 1 
HETATM 2 O O1 GOL . . . G 3 -37.104 12.937 -39.884 1 25.48 0 O1 GOL 302 BBB 1 
HETATM 3 C C2 GOL . . . G 3 -38.868 13.57 -41.275 1 24.61 0 C2 GOL 302 BBB 1 
HETATM 4 O O2 GOL . . . G 3 -39.143 14.315 -42.446 1 24.66 0 O2 GOL 302 BBB 1 
HETATM 5 C C3 GOL . . . G 3 -39.713 12.312 -41.235 1 21.36 0 C3 GOL 302 BBB 1 
HETATM 6 O O3 GOL . . . G 3 -40.521 12.32 -40.081 1 21.95 0 O3 GOL 302 BBB 1 
#
_model_server_stats.io_time_ms              12 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    18 
_model_server_stats.query_time_ms           333 
_model_server_stats.encode_time_ms          6 
_model_server_stats.element_count           6 
#