data_8P04 # _model_server_result.job_id StIaZS5Rgg4jNbAPQl6liQ _model_server_result.datetime_utc '2024-10-16 23:27:14' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8p04 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":501}' # _entry.id 8P04 # _exptl.entry_id 8P04 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 378.491 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (4~{Z})-2-(1-adamantylamino)-4-(1,3-benzothiazol-6-ylmethylidene)-1~{H}-imidazol-5-one _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 118.49 _cell.angle_gamma 90 _cell.entry_id 8P04 _cell.length_a 92.134 _cell.length_b 64.026 _cell.length_c 70.571 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8P04 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C21 H22 N4 O S' _chem_comp.formula_weight 378.491 _chem_comp.id WAK _chem_comp.mon_nstd_flag . _chem_comp.name (4~{Z})-2-(1-adamantylamino)-4-(1,3-benzothiazol-6-ylmethylidene)-1~{H}-imidazol-5-one _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C9 C8 WAK sing 376 n n C9 C4 WAK sing 377 n n C7 C8 WAK sing 378 n n C7 C6 WAK sing 379 n n C8 C10 WAK sing 380 n n C5 C4 WAK sing 381 n n C5 C6 WAK sing 382 n n C4 C3 WAK sing 383 n n C6 C11 WAK sing 384 n n C10 C2 WAK sing 385 n n C3 C2 WAK sing 386 n n C11 C2 WAK sing 387 n n C2 N1 WAK sing 388 n n S C18 WAK sing 389 n y S C19 WAK sing 390 n y C18 N3 WAK doub 391 n y N1 C1 WAK sing 392 n n C19 C20 WAK doub 393 n y C19 C17 WAK sing 394 n y N3 C17 WAK sing 395 n y C20 C14 WAK sing 396 n y N2 C1 WAK doub 397 n n N2 C12 WAK sing 398 n n C1 N WAK sing 399 n n C17 C16 WAK doub 400 n y N C WAK sing 401 n n C14 C13 WAK sing 402 n n C14 C15 WAK doub 403 n y C12 C13 WAK doub 404 z n C12 C WAK sing 405 n n C16 C15 WAK sing 406 n y C O WAK doub 407 n n C13 H1 WAK sing 408 n n C20 H2 WAK sing 409 n n C18 H3 WAK sing 410 n n C16 H4 WAK sing 411 n n C15 H5 WAK sing 412 n n N H6 WAK sing 413 n n N1 H7 WAK sing 414 n n C11 H8 WAK sing 415 n n C11 H9 WAK sing 416 n n C6 H10 WAK sing 417 n n C5 H11 WAK sing 418 n n C5 H12 WAK sing 419 n n C10 H13 WAK sing 420 n n C10 H14 WAK sing 421 n n C8 H15 WAK sing 422 n n C7 H16 WAK sing 423 n n C7 H17 WAK sing 424 n n C9 H18 WAK sing 425 n n C9 H19 WAK sing 426 n n C4 H20 WAK sing 427 n n C3 H21 WAK sing 428 n n C3 H22 WAK sing 429 n n # _atom_sites.entry_id 8P04 _atom_sites.fract_transf_matrix[1][1] 0.010854 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.005891 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015619 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.016123 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 WAK A 1 501 501 WAK E92 . C 3 HOH A 1 601 5 HOH HOH . C 3 HOH A 2 602 1 HOH HOH . C 3 HOH A 3 603 6 HOH HOH . C 3 HOH A 4 604 2 HOH HOH . C 3 HOH A 5 605 3 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O WAK . . . B 2 7.125 2.583 17.039 1 39.78 ? O WAK 501 A 1 HETATM 2 C C WAK . . . B 2 7.833 3.589 17.064 1 35.48 ? C WAK 501 A 1 HETATM 3 C C12 WAK . . . B 2 8.305 4.431 18.191 1 34.17 ? C12 WAK 501 A 1 HETATM 4 C C13 WAK . . . B 2 7.993 4.154 19.472 1 34.15 ? C13 WAK 501 A 1 HETATM 5 C C14 WAK . . . B 2 8.477 4.766 20.708 1 37.11 ? C14 WAK 501 A 1 HETATM 6 C C20 WAK . . . B 2 9.218 5.951 20.674 1 30.67 ? C20 WAK 501 A 1 HETATM 7 C C19 WAK . . . B 2 9.7 6.5 21.848 1 46.03 ? C19 WAK 501 A 1 HETATM 8 S S WAK . . . B 2 10.647 7.931 22.078 1 47.08 ? S WAK 501 A 1 HETATM 9 C C18 WAK . . . B 2 10.642 7.622 23.783 1 31.31 ? C18 WAK 501 A 1 HETATM 10 N N3 WAK . . . B 2 10.012 6.567 24.187 1 34.82 ? N3 WAK 501 A 1 HETATM 11 C C17 WAK . . . B 2 9.458 5.897 23.089 1 36.39 ? C17 WAK 501 A 1 HETATM 12 C C16 WAK . . . B 2 8.714 4.716 23.132 1 26.3 ? C16 WAK 501 A 1 HETATM 13 C C15 WAK . . . B 2 8.234 4.166 21.952 1 26.14 ? C15 WAK 501 A 1 HETATM 14 N N2 WAK . . . B 2 9.084 5.46 17.687 1 27.01 ? N2 WAK 501 A 1 HETATM 15 C C1 WAK . . . B 2 9.104 5.285 16.371 1 31.36 ? C1 WAK 501 A 1 HETATM 16 N N WAK . . . B 2 8.39 4.209 15.965 1 32.51 ? N WAK 501 A 1 HETATM 17 N N1 WAK . . . B 2 9.771 6.093 15.518 1 30.16 ? N1 WAK 501 A 1 HETATM 18 C C2 WAK . . . B 2 10.567 7.29 15.849 1 31.29 ? C2 WAK 501 A 1 HETATM 19 C C11 WAK . . . B 2 11.174 7.874 14.567 1 26.48 ? C11 WAK 501 A 1 HETATM 20 C C6 WAK . . . B 2 11.989 9.133 14.902 1 37.78 ? C6 WAK 501 A 1 HETATM 21 C C5 WAK . . . B 2 11.075 10.173 15.547 1 35.02 ? C5 WAK 501 A 1 HETATM 22 C C10 WAK . . . B 2 11.701 6.936 16.821 1 31.07 ? C10 WAK 501 A 1 HETATM 23 C C8 WAK . . . B 2 12.514 8.195 17.155 1 41.82 ? C8 WAK 501 A 1 HETATM 24 C C7 WAK . . . B 2 13.113 8.767 15.871 1 43.93 ? C7 WAK 501 A 1 HETATM 25 C C9 WAK . . . B 2 11.598 9.234 17.802 1 35.82 ? C9 WAK 501 A 1 HETATM 26 C C4 WAK . . . B 2 10.476 9.6 16.831 1 33.67 ? C4 WAK 501 A 1 HETATM 27 C C3 WAK . . . B 2 9.66 8.343 16.497 1 33.52 ? C3 WAK 501 A 1 # _model_server_stats.io_time_ms 45 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 22 _model_server_stats.query_time_ms 312 _model_server_stats.encode_time_ms 14 _model_server_stats.element_count 27 #