data_8P0S # _model_server_result.job_id -g5YvHaOJLcbAxSOAb0h7Q _model_server_result.datetime_utc '2024-10-20 19:29:55' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8p0s # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":701}' # _entry.id 8P0S # _exptl.entry_id 8P0S _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 154.251 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2,3-DIHYDROXY-1,4-DITHIOBUTANE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8P0S _cell.length_a 48.26 _cell.length_b 87.07 _cell.length_c 148.22 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8P0S _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C GLU 25 A GLU 25 1_555 A N MSE 26 A MSE 26 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? covale ? covale2 A C MSE 26 A MSE 26 1_555 A N GLN 27 A GLN 27 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? covale ? covale3 A C GLU 31 A GLU 31 1_555 A N MSE 32 A MSE 32 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.316 ? covale ? covale4 A C MSE 32 A MSE 32 1_555 A N GLU 33 A GLU 33 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.337 ? covale ? covale5 A C ILE 46 A ILE 46 1_555 A N MSE 47 A MSE 47 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale6 A C MSE 47 A MSE 47 1_555 A N LYS 48 A LYS 48 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.336 ? covale ? covale7 A C LYS 71 A LYS 71 1_555 A N MSE 72 A MSE 72 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale8 A C MSE 72 A MSE 72 1_555 A N LEU 73 A LEU 73 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.343 ? covale ? covale9 B C GLU 25 B GLU 25 1_555 B N MSE 26 B MSE 26 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale10 B C MSE 26 B MSE 26 1_555 B N GLN 27 B GLN 27 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? covale ? covale11 B C GLU 31 B GLU 31 1_555 B N MSE 32 B MSE 32 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale12 B C MSE 32 B MSE 32 1_555 B N GLU 33 B GLU 33 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale13 B C ILE 46 B ILE 46 1_555 B N MSE 47 B MSE 47 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.319 ? covale ? covale14 B C MSE 47 B MSE 47 1_555 B N LYS 48 B LYS 48 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? covale ? covale15 B C LYS 71 B LYS 71 1_555 B N MSE 72 B MSE 72 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale16 B C MSE 72 B MSE 72 1_555 B N LEU 73 B LEU 73 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? # _chem_comp.formula 'C4 H10 O2 S2' _chem_comp.formula_weight 154.251 _chem_comp.id DTT _chem_comp.mon_nstd_flag . _chem_comp.name 2,3-DIHYDROXY-1,4-DITHIOBUTANE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 1,4-DITHIOTHREITOL # _atom_sites.entry_id 8P0S _atom_sites.fract_transf_matrix[1][1] 0.020721 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011485 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006747 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 DTT A 1 701 701 DTT DTT . D 3 HOH A 1 801 35 HOH HOH . D 3 HOH A 2 802 19 HOH HOH . D 3 HOH A 3 803 34 HOH HOH . D 3 HOH A 4 804 3 HOH HOH . D 3 HOH A 5 805 26 HOH HOH . D 3 HOH A 6 806 1 HOH HOH . D 3 HOH A 7 807 14 HOH HOH . D 3 HOH A 8 808 6 HOH HOH . D 3 HOH A 9 809 36 HOH HOH . D 3 HOH A 10 810 9 HOH HOH . E 3 HOH B 1 201 33 HOH HOH . E 3 HOH B 2 202 12 HOH HOH . E 3 HOH B 3 203 21 HOH HOH . E 3 HOH B 4 204 32 HOH HOH . E 3 HOH B 5 205 25 HOH HOH . E 3 HOH B 6 206 30 HOH HOH . E 3 HOH B 7 207 2 HOH HOH . E 3 HOH B 8 208 17 HOH HOH . E 3 HOH B 9 209 29 HOH HOH . E 3 HOH B 10 210 31 HOH HOH . E 3 HOH B 11 211 4 HOH HOH . E 3 HOH B 12 212 22 HOH HOH . E 3 HOH B 13 213 28 HOH HOH . E 3 HOH B 14 214 27 HOH HOH . E 3 HOH B 15 215 10 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S1 DTT . . . C 2 7.618 52.321 9.494 1 47.47 ? S1 DTT 701 A 1 HETATM 2 C C1 DTT . . . C 2 8.955 52.764 8.342 1 51.86 ? C1 DTT 701 A 1 HETATM 3 C C2 DTT . . . C 2 10.093 53.579 8.967 1 51.47 ? C2 DTT 701 A 1 HETATM 4 O O2 DTT . . . C 2 9.602 54.818 9.421 1 50.29 ? O2 DTT 701 A 1 HETATM 5 C C3 DTT . . . C 2 11.265 53.778 8 1 45.63 ? C3 DTT 701 A 1 HETATM 6 O O3 DTT . . . C 2 12.03 54.875 8.416 1 68.05 ? O3 DTT 701 A 1 HETATM 7 C C4 DTT . . . C 2 12.178 52.54 7.889 1 75.94 ? C4 DTT 701 A 1 HETATM 8 S S4 DTT . . . C 2 13.919 52.691 8.437 1 71.22 ? S4 DTT 701 A 1 # _model_server_stats.io_time_ms 29 _model_server_stats.parse_time_ms 20 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 330 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 8 #